RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 UVSSAQ2YD98 709 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 BRF1Q92994 677 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 STRN4Q9NRL3 753 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 PDCP20941 246 aa11.91□□□□□ -0.5
LRRC28-216ENST00000559819 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
LRRC28-216ENST00000559819 TJP1Q07157 1748 aa11.91□□□□□ -0.5
LRRC28-216ENST00000559819 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
LRRC28-216ENST00000559819 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
LRRC28-216ENST00000559819 EYA2O00167 538 aa11.9□□□□□ -0.5
LRRC28-216ENST00000559819 SCRN1Q12765 414 aa11.9□□□□□ -0.5
LRRC28-216ENST00000559819 PARP4Q9UKK3 1724 aaKnown RBP11.9□□□□□ -0.5
LRRC28-216ENST00000559819 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
LRRC28-216ENST00000559819 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-216ENST00000559819 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
LRRC28-216ENST00000559819 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 KDM4AO75164 1064 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 TPM2P07951 284 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 IFIT1P09914 478 aaKnown RBP11.89□□□□□ -0.51
LRRC28-216ENST00000559819 FGD1P98174 961 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 APOBRQ0VD83 1088 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-216ENST00000559819 TTC12Q9H892 705 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-216ENST00000559819 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-216ENST00000559819 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 M0R2C6 588 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 IL2RBP14784 551 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 ADORA1P30542 326 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 MCM5P33992 734 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 RESTQ13127 1097 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 ZMYM1Q5SVZ6 1142 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 MAST3O60307 1309 aa11.89□□□□□ -0.51
LRRC28-216ENST00000559819 TTLL5Q6EMB2 1281 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-216ENST00000559819 NUP62CLQ9H1M0 184 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 DACT1Q9NYF0 836 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 CCT2P78371 535 aaKnown RBP11.88□□□□□ -0.51
LRRC28-216ENST00000559819 HSP90AB3PQ58FF7 597 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 PGBD1Q96JS3 809 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 HELLSQ9NRZ9 838 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 NAP1L2Q9ULW6 460 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-216ENST00000559819 ELP1O95163 1332 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 H3BQV1 296 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
LRRC28-216ENST00000559819 FKBP4Q02790 459 aaKnown RBP eCLIP11.88□□□□□ -0.51
LRRC28-216ENST00000559819 CEBPZQ03701 1054 aaKnown RBP11.88□□□□□ -0.51
LRRC28-216ENST00000559819 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 GPR108Q9NPR9 543 aa11.88□□□□□ -0.51
LRRC28-216ENST00000559819 UBR2Q8IWV8 1755 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 E7EWF7 191 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 RNF113AO15541 343 aaKnown RBP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 CTDNEP1O95476 244 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 FAM89AQ96GI7 184 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 NCOA5Q9HCD5 579 aaKnown RBP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 CCDC192P0DO97 292 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 TYRO3Q06418 890 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 KIAA2012Q0VF49 1180 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 ISCA1Q9BUE6 129 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 DSCC1Q9BVC3 393 aa11.87□□□□□ -0.51
LRRC28-216ENST00000559819 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
LRRC28-216ENST00000559819 PFKFB2O60825 505 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 NR1I2O75469 434 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 SCARF1Q14162 830 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 DNAJC10Q8IXB1 793 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-216ENST00000559819 GPHNQ9NQX3 736 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-216ENST00000559819 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
LRRC28-216ENST00000559819 CCDC57Q2TAC2 916 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 SPC24Q8NBT2 197 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 TNMDQ9H2S6 317 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 CEP126Q9P2H0 1117 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
LRRC28-216ENST00000559819 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
LRRC28-216ENST00000559819 PAPPAQ13219 1627 aa11.85□□□□□ -0.51
LRRC28-216ENST00000559819 CIAO1O76071 339 aa11.85□□□□□ -0.51
LRRC28-216ENST00000559819 PDIA4P13667 645 aaKnown RBP11.85□□□□□ -0.51
LRRC28-216ENST00000559819 EVA1CP58658 441 aa11.85□□□□□ -0.51
LRRC28-216ENST00000559819 HAND2P61296 217 aa11.85□□□□□ -0.51
LRRC28-216ENST00000559819 GUCY1B3Q02153 619 aa11.85□□□□□ -0.51
LRRC28-216ENST00000559819 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms