RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 RIMBP2O15034 1052 aa14.44□□□□□ -0.1
HERC1-204ENST00000559715 DOK7Q18PE1 504 aa14.44□□□□□ -0.1
HERC1-204ENST00000559715 ZNF609O15014 1411 aa14.43□□□□□ -0.1
HERC1-204ENST00000559715 WTIPA6NIX2 430 aaPredicted RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 H7C1D1 291 aa14.43□□□□□ -0.1
HERC1-204ENST00000559715 ECE2O60344 883 aa14.43□□□□□ -0.1
HERC1-204ENST00000559715 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 RGS19P49795 217 aa14.43□□□□□ -0.1
HERC1-204ENST00000559715 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 TBC1D10BQ4KMP7 808 aaPredicted RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 ZBTB38Q8NAP3 1195 aaPredicted RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 C8orf58Q8NAV2 365 aa14.43□□□□□ -0.1
HERC1-204ENST00000559715 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
HERC1-204ENST00000559715 MYH3P11055 1940 aa14.43□□□□□ -0.1
HERC1-204ENST00000559715 ASTN2O75129 1339 aaPredicted RBP14.42□□□□□ -0.1
HERC1-204ENST00000559715 GMLQ99445 158 aa14.42□□□□□ -0.1
HERC1-204ENST00000559715 HTTP42858 3142 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 ADM5C9JUS6 153 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 C6orf229H3BNL8 230 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 APAF1O14727 1248 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 RPS12P25398 132 aaKnown RBP14.41□□□□□ -0.1
HERC1-204ENST00000559715 WDR43Q15061 677 aaKnown RBP eCLIP14.41□□□□□ -0.1
HERC1-204ENST00000559715 JARID2Q92833 1246 aaPredicted RBP14.41□□□□□ -0.1
HERC1-204ENST00000559715 ZNF408Q9H9D4 720 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 PDE4DIPQ5VU43 2346 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 SPEF2Q9C093 1822 aa14.41□□□□□ -0.1
HERC1-204ENST00000559715 ELL2O00472 640 aaPredicted RBP14.4□□□□□ -0.1
HERC1-204ENST00000559715 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
HERC1-204ENST00000559715 HUNKP57058 714 aa14.4□□□□□ -0.1
HERC1-204ENST00000559715 ZNF280AP59817 542 aaPredicted RBP14.4□□□□□ -0.1
HERC1-204ENST00000559715 TSPYL6Q8N831 410 aa14.4□□□□□ -0.1
HERC1-204ENST00000559715 CCDC191Q8NCU4 936 aa14.4□□□□□ -0.1
HERC1-204ENST00000559715 AKAP11Q9UKA4 1901 aa14.4□□□□□ -0.1
HERC1-204ENST00000559715 CA12O43570 354 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 IGKV5-2P06315 115 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 KRT26Q7Z3Y9 468 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 RIC3Q7Z5B4 369 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 MYD88Q99836 296 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 BEGAINQ9BUH8 593 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
HERC1-204ENST00000559715 CENPFP49454 3210 aa14.39□□□□□ -0.11
HERC1-204ENST00000559715 PDE8AO60658 829 aa14.38□□□□□ -0.11
HERC1-204ENST00000559715 NOGQ13253 232 aa14.38□□□□□ -0.11
HERC1-204ENST00000559715 FAM161AQ3B820 660 aa14.38□□□□□ -0.11
HERC1-204ENST00000559715 EYA3Q99504 573 aa14.38□□□□□ -0.11
HERC1-204ENST00000559715 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
HERC1-204ENST00000559715 GBA2Q9HCG7 927 aaPredicted RBP14.38□□□□□ -0.11
HERC1-204ENST00000559715 GNAI1P63096 354 aa14.37□□□□□ -0.11
HERC1-204ENST00000559715 RBM26Q5T8P6 1007 aaKnown RBP14.37□□□□□ -0.11
HERC1-204ENST00000559715 RGMBQ6NW40 437 aa14.37□□□□□ -0.11
HERC1-204ENST00000559715 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
HERC1-204ENST00000559715 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
HERC1-204ENST00000559715 UFL1O94874 794 aa14.36□□□□□ -0.11
HERC1-204ENST00000559715 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
HERC1-204ENST00000559715 KIF4BQ2VIQ3 1234 aa14.36□□□□□ -0.11
HERC1-204ENST00000559715 CCDC184Q52MB2 194 aa14.36□□□□□ -0.11
HERC1-204ENST00000559715 RSBN1LQ6PCB5 846 aaPredicted RBP14.36□□□□□ -0.11
HERC1-204ENST00000559715 TTLL11Q8NHH1 800 aa14.36□□□□□ -0.11
HERC1-204ENST00000559715 CCDC85AQ96PX6 553 aaPredicted RBP14.36□□□□□ -0.11
HERC1-204ENST00000559715 CWC25Q9NXE8 425 aaPredicted RBP14.36□□□□□ -0.11
HERC1-204ENST00000559715 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
HERC1-204ENST00000559715 MKI67P46013 3256 aaKnown RBP14.36□□□□□ -0.11
HERC1-204ENST00000559715 CCDC85CA6NKD9 419 aa14.35□□□□□ -0.11
HERC1-204ENST00000559715 KIF23Q02241 960 aaPredicted RBP14.35□□□□□ -0.11
HERC1-204ENST00000559715 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
HERC1-204ENST00000559715 AGBL3Q8NEM8 1001 aa14.35□□□□□ -0.11
HERC1-204ENST00000559715 DCPSQ96C86 337 aaKnown RBP14.35□□□□□ -0.11
HERC1-204ENST00000559715 GGA1Q9UJY5 639 aa14.35□□□□□ -0.11
HERC1-204ENST00000559715 SLC10A3P09131 477 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 SCARF1Q14162 830 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 G2E3Q7L622 706 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 CDCA5Q96FF9 252 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 CSRNP1Q96S65 589 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 ANKIB1Q9P2G1 1089 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 MINPP1Q9UNW1 487 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 MAP3K2Q9Y2U5 619 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 CACNA1FO60840 1977 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 XDHP47989 1333 aa14.34□□□□□ -0.11
HERC1-204ENST00000559715 A0A1B0GUL6 1792 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 PAPPA2Q9BXP8 1791 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 PI4KAP2A4QPH2 592 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.12
HERC1-204ENST00000559715 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 PI4KAP1Q8N8J0 262 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 C2orf69Q8N8R5 385 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 CCDC102AQ96A19 550 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 GREM2Q9H772 168 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 RNF186Q9NXI6 227 aa14.33□□□□□ -0.12
HERC1-204ENST00000559715 SCAF8Q9UPN6 1271 aaKnown RBP14.33□□□□□ -0.12
HERC1-204ENST00000559715 BRCA2P51587 3418 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 H7C1W4 665 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 ZNF157P51786 506 aaPredicted RBP14.32□□□□□ -0.12
HERC1-204ENST00000559715 CASP7P55210 303 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 CTSWP56202 376 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
HERC1-204ENST00000559715 DACT2Q5SW24 774 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 CCDC30Q5VVM6 783 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms