RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 UFL1O94874 794 aa19.18■□□□□ 0.66
LRRC28-213ENST00000559399 IGKV5-2P06315 115 aa19.18■□□□□ 0.66
LRRC28-213ENST00000559399 CTCFP49711 727 aaPredicted RBP19.18■□□□□ 0.66
LRRC28-213ENST00000559399 HIRAP54198 1017 aaPredicted RBP19.18■□□□□ 0.66
LRRC28-213ENST00000559399 DOK7Q18PE1 504 aa19.18■□□□□ 0.66
LRRC28-213ENST00000559399 PAXIP1Q6ZW49 1069 aaPredicted RBP19.18■□□□□ 0.66
LRRC28-213ENST00000559399 GPR101Q96P66 508 aaPredicted RBP19.18■□□□□ 0.66
LRRC28-213ENST00000559399 GLIS2Q9BZE0 524 aaPredicted RBP19.18■□□□□ 0.66
LRRC28-213ENST00000559399 ZC3H12CQ9C0D7 883 aaKnown RBP19.18■□□□□ 0.66
LRRC28-213ENST00000559399 WBP1LQ9NX94 342 aa19.18■□□□□ 0.66
LRRC28-213ENST00000559399 RPS12P25398 132 aaKnown RBP19.17■□□□□ 0.66
LRRC28-213ENST00000559399 ECE1P42892 770 aa19.17■□□□□ 0.66
LRRC28-213ENST00000559399 CTSWP56202 376 aa19.17■□□□□ 0.66
LRRC28-213ENST00000559399 ANKRD18AQ8IVF6 992 aa19.17■□□□□ 0.66
LRRC28-213ENST00000559399 GGA1Q9UJY5 639 aa19.17■□□□□ 0.66
LRRC28-213ENST00000559399 TLL2Q9Y6L7 1015 aa19.17■□□□□ 0.66
LRRC28-213ENST00000559399 CAPN15O75808 1086 aa19.16■□□□□ 0.66
LRRC28-213ENST00000559399 CELF2O95319 508 aaKnown RBP19.16■□□□□ 0.66
LRRC28-213ENST00000559399 MAP2K1Q02750 393 aaPredicted RBP19.16■□□□□ 0.66
LRRC28-213ENST00000559399 CDC37L1Q7L3B6 337 aa19.16■□□□□ 0.66
LRRC28-213ENST00000559399 CAPNS2Q96L46 248 aa19.16■□□□□ 0.66
LRRC28-213ENST00000559399 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
LRRC28-213ENST00000559399 RTL9Q8NET4 1388 aa19.16■□□□□ 0.66
LRRC28-213ENST00000559399 G3V3G9 751 aa19.15■□□□□ 0.66
LRRC28-213ENST00000559399 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
LRRC28-213ENST00000559399 DCAF8Q5TAQ9 597 aa19.15■□□□□ 0.66
LRRC28-213ENST00000559399 CDC5LQ99459 802 aaKnown RBP19.15■□□□□ 0.66
LRRC28-213ENST00000559399 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
LRRC28-213ENST00000559399 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
LRRC28-213ENST00000559399 NEURL1BA8MQ27 555 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 GRM1Q13255 1194 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 CWF19L2Q2TBE0 894 aaKnown RBP19.14■□□□□ 0.65
LRRC28-213ENST00000559399 CYP4F22Q6NT55 531 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 G2E3Q7L622 706 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 SAMD7Q7Z3H4 446 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 KCNQ5Q9NR82 932 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 XDHP47989 1333 aa19.14■□□□□ 0.65
LRRC28-213ENST00000559399 TBC1D10BQ4KMP7 808 aaPredicted RBP19.13■□□□□ 0.65
LRRC28-213ENST00000559399 SAPCD2Q86UD0 394 aa19.13■□□□□ 0.65
LRRC28-213ENST00000559399 ZNF408Q9H9D4 720 aa19.13■□□□□ 0.65
LRRC28-213ENST00000559399 FLIIQ13045 1269 aa19.12■□□□□ 0.65
LRRC28-213ENST00000559399 UBE3BQ7Z3V4 1068 aa19.12■□□□□ 0.65
LRRC28-213ENST00000559399 TTLL11Q8NHH1 800 aa19.12■□□□□ 0.65
LRRC28-213ENST00000559399 GREM2Q9H772 168 aa19.12■□□□□ 0.65
LRRC28-213ENST00000559399 TAF1P21675 1872 aa19.11■□□□□ 0.65
LRRC28-213ENST00000559399 EGFRP00533 1210 aa19.11■□□□□ 0.65
LRRC28-213ENST00000559399 VIL1P09327 827 aaKnown RBP19.11■□□□□ 0.65
LRRC28-213ENST00000559399 ATP2B4P23634 1241 aa19.11■□□□□ 0.65
LRRC28-213ENST00000559399 LBX1P52954 281 aa19.11■□□□□ 0.65
LRRC28-213ENST00000559399 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
LRRC28-213ENST00000559399 HHIPL1Q96JK4 782 aa19.11■□□□□ 0.65
LRRC28-213ENST00000559399 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
LRRC28-213ENST00000559399 H7C1W4 665 aa19.1■□□□□ 0.65
LRRC28-213ENST00000559399 HSPA8P11142 646 aaKnown RBP19.1■□□□□ 0.65
LRRC28-213ENST00000559399 FKBP5Q13451 457 aaPredicted RBP19.1■□□□□ 0.65
LRRC28-213ENST00000559399 KIF4BQ2VIQ3 1234 aa19.1■□□□□ 0.65
LRRC28-213ENST00000559399 RBM26Q5T8P6 1007 aaKnown RBP19.1■□□□□ 0.65
LRRC28-213ENST00000559399 KRT26Q7Z3Y9 468 aa19.1■□□□□ 0.65
LRRC28-213ENST00000559399 USP48Q86UV5 1035 aa19.1■□□□□ 0.65
LRRC28-213ENST00000559399 BEGAINQ9BUH8 593 aa19.1■□□□□ 0.65
LRRC28-213ENST00000559399 BSDC1Q9NW68 430 aaPredicted RBP19.1■□□□□ 0.65
LRRC28-213ENST00000559399 ZNF609O15014 1411 aa19.09■□□□□ 0.65
LRRC28-213ENST00000559399 GCKRQ14397 625 aa19.09■□□□□ 0.65
LRRC28-213ENST00000559399 DCPSQ96C86 337 aaKnown RBP19.09■□□□□ 0.65
LRRC28-213ENST00000559399 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
LRRC28-213ENST00000559399 THSD7BQ9C0I4 1608 aa19.08■□□□□ 0.65
LRRC28-213ENST00000559399 MAP2K2P36507 400 aa19.08■□□□□ 0.64
LRRC28-213ENST00000559399 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
LRRC28-213ENST00000559399 DNAAF4Q8WXU2 420 aa19.08■□□□□ 0.64
LRRC28-213ENST00000559399 PLA2G12BQ9BX93 195 aa19.08■□□□□ 0.64
LRRC28-213ENST00000559399 MINPP1Q9UNW1 487 aa19.08■□□□□ 0.64
LRRC28-213ENST00000559399 MED23Q9ULK4 1368 aa19.07■□□□□ 0.64
LRRC28-213ENST00000559399 AOC2O75106 756 aa19.07■□□□□ 0.64
LRRC28-213ENST00000559399 VAMP4O75379 141 aa19.07■□□□□ 0.64
LRRC28-213ENST00000559399 IGHMBP2P38935 993 aaKnown RBP19.07■□□□□ 0.64
LRRC28-213ENST00000559399 EXOSC9Q06265 439 aaKnown RBP19.07■□□□□ 0.64
LRRC28-213ENST00000559399 PODNQ7Z5L7 613 aa19.07■□□□□ 0.64
LRRC28-213ENST00000559399 AGBL3Q8NEM8 1001 aa19.07■□□□□ 0.64
LRRC28-213ENST00000559399 LINS1Q8NG48 757 aa19.07■□□□□ 0.64
LRRC28-213ENST00000559399 USP17L3A6NCW0 530 aa19.06■□□□□ 0.64
LRRC28-213ENST00000559399 USP17L4A6NCW7 530 aa19.06■□□□□ 0.64
LRRC28-213ENST00000559399 ADM5C9JUS6 153 aa19.06■□□□□ 0.64
LRRC28-213ENST00000559399 ZNF280AP59817 542 aaPredicted RBP19.06■□□□□ 0.64
LRRC28-213ENST00000559399 DLK2Q6UY11 383 aa19.06■□□□□ 0.64
LRRC28-213ENST00000559399 USP17L1Q7RTZ2 530 aa19.06■□□□□ 0.64
LRRC28-213ENST00000559399 GGA3Q9NZ52 723 aa19.06■□□□□ 0.64
LRRC28-213ENST00000559399 CCT4P50991 539 aaKnown RBP19.05■□□□□ 0.64
LRRC28-213ENST00000559399 CASP7P55210 303 aa19.05■□□□□ 0.64
LRRC28-213ENST00000559399 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
LRRC28-213ENST00000559399 SULF1Q8IWU6 871 aa19.05■□□□□ 0.64
LRRC28-213ENST00000559399 USP17L8P0C7I0 530 aa19.04■□□□□ 0.64
LRRC28-213ENST00000559399 ITGA6P23229 1130 aa19.04■□□□□ 0.64
LRRC28-213ENST00000559399 HUNKP57058 714 aa19.04■□□□□ 0.64
LRRC28-213ENST00000559399 GBA2Q9HCG7 927 aaPredicted RBP19.04■□□□□ 0.64
LRRC28-213ENST00000559399 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
LRRC28-213ENST00000559399 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
LRRC28-213ENST00000559399 C2orf69Q8N8R5 385 aa19.03■□□□□ 0.64
LRRC28-213ENST00000559399 GMLQ99445 158 aa19.03■□□□□ 0.64
LRRC28-213ENST00000559399 MPHOSPH8Q99549 860 aa19.03■□□□□ 0.64
LRRC28-213ENST00000559399 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms