RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 ANXA1P04083 346 aa21.5■■□□□ 1.03
PSEN1-224ENST00000559361 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
PSEN1-224ENST00000559361 DLK2Q6UY11 383 aa21.5■■□□□ 1.03
PSEN1-224ENST00000559361 TCIRG1Q13488 830 aa21.49■■□□□ 1.03
PSEN1-224ENST00000559361 COPS6Q7L5N1 327 aa21.49■■□□□ 1.03
PSEN1-224ENST00000559361 SAGE1Q9NXZ1 904 aa21.49■■□□□ 1.03
PSEN1-224ENST00000559361 ZBTB12Q9Y330 459 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-224ENST00000559361 EXOSC9Q06265 439 aaKnown RBP21.48■■□□□ 1.03
PSEN1-224ENST00000559361 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-224ENST00000559361 RGMBQ6NW40 437 aa21.48■■□□□ 1.03
PSEN1-224ENST00000559361 SAMD7Q7Z3H4 446 aa21.48■■□□□ 1.03
PSEN1-224ENST00000559361 TRMT112Q9UI30 125 aaKnown RBP21.48■■□□□ 1.03
PSEN1-224ENST00000559361 AKAP11Q9UKA4 1901 aa21.48■■□□□ 1.03
PSEN1-224ENST00000559361 SH3TC1Q8TE82 1336 aa21.48■■□□□ 1.03
PSEN1-224ENST00000559361 PSMD14O00487 310 aa21.47■■□□□ 1.03
PSEN1-224ENST00000559361 C8orf58Q8NAV2 365 aa21.47■■□□□ 1.03
PSEN1-224ENST00000559361 GBA2Q9HCG7 927 aaPredicted RBP21.47■■□□□ 1.03
PSEN1-224ENST00000559361 EGFRP00533 1210 aa21.46■■□□□ 1.03
PSEN1-224ENST00000559361 KRT26Q7Z3Y9 468 aa21.46■■□□□ 1.03
PSEN1-224ENST00000559361 XAGE3Q8WTP9 111 aa21.46■■□□□ 1.03
PSEN1-224ENST00000559361 CCDC102AQ96A19 550 aa21.46■■□□□ 1.03
PSEN1-224ENST00000559361 RPS12P25398 132 aaKnown RBP21.45■■□□□ 1.02
PSEN1-224ENST00000559361 WASHC4Q2M389 1173 aa21.45■■□□□ 1.02
PSEN1-224ENST00000559361 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
PSEN1-224ENST00000559361 KIF23Q02241 960 aaPredicted RBP21.44■■□□□ 1.02
PSEN1-224ENST00000559361 TBC1D10BQ4KMP7 808 aaPredicted RBP21.44■■□□□ 1.02
PSEN1-224ENST00000559361 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
PSEN1-224ENST00000559361 CCDC30Q5VVM6 783 aa21.44■■□□□ 1.02
PSEN1-224ENST00000559361 C2orf69Q8N8R5 385 aa21.44■■□□□ 1.02
PSEN1-224ENST00000559361 VAMP4O75379 141 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 AIMP1Q12904 312 aaKnown RBP21.43■■□□□ 1.02
PSEN1-224ENST00000559361 SF3B3Q15393 1217 aaKnown RBP21.43■■□□□ 1.02
PSEN1-224ENST00000559361 KRT24Q2M2I5 525 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 TSPYL6Q8N831 410 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 DBNDD1Q9H9R9 158 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 RNF186Q9NXI6 227 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 POLLQ9UGP5 575 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 SCN9AQ15858 1988 aa21.43■■□□□ 1.02
PSEN1-224ENST00000559361 RTL9Q8NET4 1388 aa21.42■■□□□ 1.02
PSEN1-224ENST00000559361 CELF1Q92879 486 aaKnown RBP21.42■■□□□ 1.02
PSEN1-224ENST00000559361 KCNQ5Q9NR82 932 aa21.42■■□□□ 1.02
PSEN1-224ENST00000559361 NSFL1CQ9UNZ2 370 aaKnown RBP21.42■■□□□ 1.02
PSEN1-224ENST00000559361 ADM5C9JUS6 153 aa21.41■■□□□ 1.02
PSEN1-224ENST00000559361 ELL2O00472 640 aaPredicted RBP21.41■■□□□ 1.02
PSEN1-224ENST00000559361 ZNF157P51786 506 aaPredicted RBP21.41■■□□□ 1.02
PSEN1-224ENST00000559361 DCPSQ96C86 337 aaKnown RBP21.41■■□□□ 1.02
PSEN1-224ENST00000559361 DBF4Q9UBU7 674 aaPredicted RBP21.41■■□□□ 1.02
PSEN1-224ENST00000559361 TRPA1O75762 1119 aa21.4■■□□□ 1.02
PSEN1-224ENST00000559361 SLC10A3P09131 477 aa21.4■■□□□ 1.02
PSEN1-224ENST00000559361 CSRNP1Q96S65 589 aa21.4■■□□□ 1.02
PSEN1-224ENST00000559361 ISCA1Q9BUE6 129 aa21.4■■□□□ 1.02
PSEN1-224ENST00000559361 STK31Q9BXU1 1019 aa21.4■■□□□ 1.02
PSEN1-224ENST00000559361 COL4A1P02462 1669 aa21.4■■□□□ 1.02
PSEN1-224ENST00000559361 RIMBP2O15034 1052 aa21.39■■□□□ 1.01
PSEN1-224ENST00000559361 ECE2O60344 883 aa21.39■■□□□ 1.01
PSEN1-224ENST00000559361 VIL1P09327 827 aaKnown RBP21.39■■□□□ 1.01
PSEN1-224ENST00000559361 GPSM2P81274 684 aa21.39■■□□□ 1.01
PSEN1-224ENST00000559361 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.01
PSEN1-224ENST00000559361 NECTIN2Q92692 538 aa21.39■■□□□ 1.01
PSEN1-224ENST00000559361 C6orf229H3BNL8 230 aa21.38■■□□□ 1.01
PSEN1-224ENST00000559361 RBM26Q5T8P6 1007 aaKnown RBP21.38■■□□□ 1.01
PSEN1-224ENST00000559361 SOX10P56693 466 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 DOK7Q18PE1 504 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 KIF4BQ2VIQ3 1234 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 PLBD2Q8NHP8 589 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 TBC1D16Q8TBP0 767 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 FAM89AQ96GI7 184 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 EYA3Q99504 573 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
PSEN1-224ENST00000559361 REM2Q8IYK8 340 aaPredicted RBP21.36■■□□□ 1.01
PSEN1-224ENST00000559361 TRIM28Q13263 835 aaKnown RBP21.35■■□□□ 1.01
PSEN1-224ENST00000559361 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
PSEN1-224ENST00000559361 CTU1Q7Z7A3 348 aaKnown RBP21.35■■□□□ 1.01
PSEN1-224ENST00000559361 SULF1Q8IWU6 871 aa21.35■■□□□ 1.01
PSEN1-224ENST00000559361 GGA3Q9NZ52 723 aa21.35■■□□□ 1.01
PSEN1-224ENST00000559361 PODXL2Q9NZ53 605 aa21.35■■□□□ 1.01
PSEN1-224ENST00000559361 CHPF2Q9P2E5 772 aa21.35■■□□□ 1.01
PSEN1-224ENST00000559361 ZNF609O15014 1411 aa21.35■■□□□ 1.01
PSEN1-224ENST00000559361 ASTN2O75129 1339 aaPredicted RBP21.34■■□□□ 1.01
PSEN1-224ENST00000559361 ZNF280AP59817 542 aaPredicted RBP21.34■■□□□ 1.01
PSEN1-224ENST00000559361 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
PSEN1-224ENST00000559361 CDCA5Q96FF9 252 aa21.34■■□□□ 1.01
PSEN1-224ENST00000559361 PSME4Q14997 1843 aa21.34■■□□□ 1.01
PSEN1-224ENST00000559361 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
PSEN1-224ENST00000559361 RASAL3Q86YV0 1011 aa21.33■■□□□ 1.01
PSEN1-224ENST00000559361 ZC3H12CQ9C0D7 883 aaKnown RBP21.33■■□□□ 1.01
PSEN1-224ENST00000559361 FKBP1BP68106 108 aa21.32■■□□□ 1
PSEN1-224ENST00000559361 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
PSEN1-224ENST00000559361 IRS4O14654 1257 aaPredicted RBP21.31■■□□□ 1
PSEN1-224ENST00000559361 PRPF38BQ5VTL8 546 aaKnown RBP21.31■■□□□ 1
PSEN1-224ENST00000559361 AGBL3Q8NEM8 1001 aa21.31■■□□□ 1
PSEN1-224ENST00000559361 GMLQ99445 158 aa21.31■■□□□ 1
PSEN1-224ENST00000559361 SMC4Q9NTJ3 1288 aa21.31■■□□□ 1
PSEN1-224ENST00000559361 KIF16BQ96L93 1317 aa21.3■■□□□ 1
PSEN1-224ENST00000559361 SLC4A2P04920 1241 aa21.3■■□□□ 1
PSEN1-224ENST00000559361 SCARF1Q14162 830 aa21.3■■□□□ 1
PSEN1-224ENST00000559361 SSH1Q8WYL5 1049 aa21.3■■□□□ 1
PSEN1-224ENST00000559361 RCAN3Q9UKA8 241 aa21.3■■□□□ 1
PSEN1-224ENST00000559361 PAPPA2Q9BXP8 1791 aa21.3■■□□□ 1
PSEN1-224ENST00000559361 PKN2Q16513 984 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms