RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 ATG9AQ7Z3C6 839 aa19.92■□□□□ 0.78
PBX1-215ENST00000559240 LNPKQ9C0E8 428 aa19.92■□□□□ 0.78
PBX1-215ENST00000559240 PA2G4Q9UQ80 394 aaKnown RBP19.92■□□□□ 0.78
PBX1-215ENST00000559240 SASH1O94885 1247 aa19.92■□□□□ 0.78
PBX1-215ENST00000559240 CNBD1Q8NA66 436 aa19.92■□□□□ 0.78
PBX1-215ENST00000559240 GREM2Q9H772 168 aa19.92■□□□□ 0.78
PBX1-215ENST00000559240 SERPINB2P05120 415 aa19.91■□□□□ 0.78
PBX1-215ENST00000559240 ITGA6P23229 1130 aa19.91■□□□□ 0.78
PBX1-215ENST00000559240 PRR5LQ6MZQ0 368 aa19.91■□□□□ 0.78
PBX1-215ENST00000559240 NUTM1Q86Y26 1132 aa19.91■□□□□ 0.78
PBX1-215ENST00000559240 HCLS1P14317 486 aaPredicted RBP19.91■□□□□ 0.78
PBX1-215ENST00000559240 BICDL1Q6ZP65 573 aa19.91■□□□□ 0.78
PBX1-215ENST00000559240 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
PBX1-215ENST00000559240 CRY2Q49AN0 593 aa19.9■□□□□ 0.78
PBX1-215ENST00000559240 NLRP3Q96P20 1036 aa19.9■□□□□ 0.78
PBX1-215ENST00000559240 ST5P78524 1137 aa19.89■□□□□ 0.78
PBX1-215ENST00000559240 GOLGA6L3A6NEY3 463 aa19.89■□□□□ 0.77
PBX1-215ENST00000559240 GZF1Q9H116 711 aaPredicted RBP19.89■□□□□ 0.77
PBX1-215ENST00000559240 NCLP19338 710 aaKnown RBP19.89■□□□□ 0.77
PBX1-215ENST00000559240 RIPOR2Q9Y4F9 1068 aa19.89■□□□□ 0.77
PBX1-215ENST00000559240 SPEF2Q9C093 1822 aa19.88■□□□□ 0.77
PBX1-215ENST00000559240 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
PBX1-215ENST00000559240 CHMP3Q9Y3E7 222 aa19.88■□□□□ 0.77
PBX1-215ENST00000559240 LRRC37AA6NMS7 1700 aa19.88■□□□□ 0.77
PBX1-215ENST00000559240 CLASRPQ8N2M8 674 aaKnown RBP19.88■□□□□ 0.77
PBX1-215ENST00000559240 CDC5LQ99459 802 aaKnown RBP19.88■□□□□ 0.77
PBX1-215ENST00000559240 ZNF609O15014 1411 aa19.88■□□□□ 0.77
PBX1-215ENST00000559240 TTC41PQ6P2S7 1318 aa19.87■□□□□ 0.77
PBX1-215ENST00000559240 OS9Q13438 667 aaPredicted RBP19.87■□□□□ 0.77
PBX1-215ENST00000559240 KLHDC4Q8TBB5 520 aa19.87■□□□□ 0.77
PBX1-215ENST00000559240 MROH5Q6ZUA9 1318 aa19.86■□□□□ 0.77
PBX1-215ENST00000559240 FAM177BA6PVY3 158 aa19.86■□□□□ 0.77
PBX1-215ENST00000559240 ZBTB22O15209 634 aa19.86■□□□□ 0.77
PBX1-215ENST00000559240 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
PBX1-215ENST00000559240 BMP2KLQ5H9B9 411 aa19.86■□□□□ 0.77
PBX1-215ENST00000559240 COL4A1P02462 1669 aa19.86■□□□□ 0.77
PBX1-215ENST00000559240 HOXA10P31260 410 aaPredicted RBP19.85■□□□□ 0.77
PBX1-215ENST00000559240 DMTNQ08495 405 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 C3orf67Q6ZVT6 689 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 BRIP1Q9BX63 1249 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 DLEC1Q9Y238 1755 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 VGLL2Q8N8G2 317 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 PARP3Q9Y6F1 533 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 PDE1AP54750 535 aa19.85■□□□□ 0.77
PBX1-215ENST00000559240 MX1P20591 662 aa19.84■□□□□ 0.77
PBX1-215ENST00000559240 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
PBX1-215ENST00000559240 LRRC24Q50LG9 513 aa19.84■□□□□ 0.77
PBX1-215ENST00000559240 TNNI3KQ59H18 835 aa19.84■□□□□ 0.77
PBX1-215ENST00000559240 ZNF594Q96JF6 807 aaPredicted RBP19.84■□□□□ 0.77
PBX1-215ENST00000559240 SIL1Q9H173 461 aa19.84■□□□□ 0.77
PBX1-215ENST00000559240 BSDC1Q9NW68 430 aaPredicted RBP19.84■□□□□ 0.77
PBX1-215ENST00000559240 AKAP2Q9Y2D5 859 aa19.84■□□□□ 0.77
PBX1-215ENST00000559240 FPGT-TNNI3KV9GXZ4 949 aa19.84■□□□□ 0.77
PBX1-215ENST00000559240 MMP10P09238 476 aa19.83■□□□□ 0.77
PBX1-215ENST00000559240 TFCP2Q12800 502 aa19.83■□□□□ 0.77
PBX1-215ENST00000559240 IGHMBP2P38935 993 aaKnown RBP19.83■□□□□ 0.76
PBX1-215ENST00000559240 TTC22Q5TAA0 569 aa19.83■□□□□ 0.76
PBX1-215ENST00000559240 SAMD1Q6SPF0 538 aaPredicted RBP19.83■□□□□ 0.76
PBX1-215ENST00000559240 LDHAL6AQ6ZMR3 332 aa19.83■□□□□ 0.76
PBX1-215ENST00000559240 C16orf71Q8IYS4 520 aaPredicted RBP19.83■□□□□ 0.76
PBX1-215ENST00000559240 PUS3Q9BZE2 481 aaKnown RBP19.82■□□□□ 0.76
PBX1-215ENST00000559240 C10orf71Q711Q0 1435 aa19.82■□□□□ 0.76
PBX1-215ENST00000559240 TEX2Q8IWB9 1127 aa19.82■□□□□ 0.76
PBX1-215ENST00000559240 EAF2Q96CJ1 260 aaPredicted RBP19.82■□□□□ 0.76
PBX1-215ENST00000559240 IL1RAPL2Q9NP60 686 aa19.82■□□□□ 0.76
PBX1-215ENST00000559240 CEP126Q9P2H0 1117 aa19.82■□□□□ 0.76
PBX1-215ENST00000559240 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
PBX1-215ENST00000559240 SEC31BQ9NQW1 1179 aa19.81■□□□□ 0.76
PBX1-215ENST00000559240 APBB1O00213 710 aa19.81■□□□□ 0.76
PBX1-215ENST00000559240 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
PBX1-215ENST00000559240 OTUD7AQ8TE49 926 aaPredicted RBP19.81■□□□□ 0.76
PBX1-215ENST00000559240 TMC4Q7Z404 712 aa19.81■□□□□ 0.76
PBX1-215ENST00000559240 GPATCH3Q96I76 525 aa19.81■□□□□ 0.76
PBX1-215ENST00000559240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.81■□□□□ 0.76
PBX1-215ENST00000559240 IFIT2P09913 472 aaKnown RBP19.8■□□□□ 0.76
PBX1-215ENST00000559240 PDE6BP35913 854 aa19.8■□□□□ 0.76
PBX1-215ENST00000559240 GRAPQ13588 217 aa19.8■□□□□ 0.76
PBX1-215ENST00000559240 DDX46Q7L014 1031 aaKnown RBP19.8■□□□□ 0.76
PBX1-215ENST00000559240 TICAM2Q86XR7 235 aa19.8■□□□□ 0.76
PBX1-215ENST00000559240 GRAPLQ8TC17 118 aaPredicted RBP19.8■□□□□ 0.76
PBX1-215ENST00000559240 PI4K2BQ8TCG2 481 aa19.8■□□□□ 0.76
PBX1-215ENST00000559240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.8■□□□□ 0.76
PBX1-215ENST00000559240 LTBP1Q14766 1721 aa19.8■□□□□ 0.76
PBX1-215ENST00000559240 FGFR2P21802 821 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 AACSQ86V21 672 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 MPHOSPH8Q99549 860 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 CNNM1Q9NRU3 951 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 ECHDC1Q9NTX5 307 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 TAF1P21675 1872 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 PDE8BO95263 885 aa19.79■□□□□ 0.76
PBX1-215ENST00000559240 RBM17Q96I25 401 aaKnown RBP19.79■□□□□ 0.76
PBX1-215ENST00000559240 RPS8P62241 208 aaKnown RBP19.78■□□□□ 0.76
PBX1-215ENST00000559240 UTP14CQ5TAP6 766 aaKnown RBP19.78■□□□□ 0.76
PBX1-215ENST00000559240 CCDC85AQ96PX6 553 aaPredicted RBP19.78■□□□□ 0.76
PBX1-215ENST00000559240 ERC2O15083 957 aa19.78■□□□□ 0.76
PBX1-215ENST00000559240 NPHP1O15259 732 aa19.78■□□□□ 0.76
PBX1-215ENST00000559240 ZNF512BQ96KM6 892 aaPredicted RBP19.78■□□□□ 0.76
PBX1-215ENST00000559240 GLRX3O76003 335 aaKnown RBP19.77■□□□□ 0.76
PBX1-215ENST00000559240 MAP7D2Q96T17 732 aa19.77■□□□□ 0.76
PBX1-215ENST00000559240 KIAA1551Q9HCM1 1747 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms