RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 PLBD2Q8NHP8 589 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 DBNDD1Q9H9R9 158 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 POLLQ9UGP5 575 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
CLPX-205ENST00000559218 TAF1P21675 1872 aa11.29□□□□□ -0.6
CLPX-205ENST00000559218 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
CLPX-205ENST00000559218 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
CLPX-205ENST00000559218 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
CLPX-205ENST00000559218 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
CLPX-205ENST00000559218 TBC1D10BQ4KMP7 808 aaPredicted RBP11.28□□□□□ -0.6
CLPX-205ENST00000559218 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
CLPX-205ENST00000559218 TMC4Q7Z404 712 aa11.28□□□□□ -0.6
CLPX-205ENST00000559218 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
CLPX-205ENST00000559218 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
CLPX-205ENST00000559218 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
CLPX-205ENST00000559218 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
CLPX-205ENST00000559218 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
CLPX-205ENST00000559218 CA12O43570 354 aa11.27□□□□□ -0.61
CLPX-205ENST00000559218 HUNKP57058 714 aa11.27□□□□□ -0.61
CLPX-205ENST00000559218 DPF2Q92785 391 aa11.27□□□□□ -0.61
CLPX-205ENST00000559218 MCOLN1Q9GZU1 580 aa11.27□□□□□ -0.61
CLPX-205ENST00000559218 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
CLPX-205ENST00000559218 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
CLPX-205ENST00000559218 ECE2O60344 883 aa11.26□□□□□ -0.61
CLPX-205ENST00000559218 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
CLPX-205ENST00000559218 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
CLPX-205ENST00000559218 KRT26Q7Z3Y9 468 aa11.26□□□□□ -0.61
CLPX-205ENST00000559218 TBC1D16Q8TBP0 767 aa11.26□□□□□ -0.61
CLPX-205ENST00000559218 RUNDC1Q96C34 613 aa11.26□□□□□ -0.61
CLPX-205ENST00000559218 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
CLPX-205ENST00000559218 FAM155AB1AL88 458 aaPredicted RBP11.25□□□□□ -0.61
CLPX-205ENST00000559218 HOXB7P09629 217 aa11.25□□□□□ -0.61
CLPX-205ENST00000559218 RGS19P49795 217 aa11.25□□□□□ -0.61
CLPX-205ENST00000559218 RPS8P62241 208 aaKnown RBP11.25□□□□□ -0.61
CLPX-205ENST00000559218 MLLT1Q03111 559 aaPredicted RBP11.25□□□□□ -0.61
CLPX-205ENST00000559218 NOGQ13253 232 aa11.25□□□□□ -0.61
CLPX-205ENST00000559218 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
CLPX-205ENST00000559218 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
CLPX-205ENST00000559218 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
CLPX-205ENST00000559218 DDX60Q8IY21 1712 aaKnown RBP11.25□□□□□ -0.61
CLPX-205ENST00000559218 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
CLPX-205ENST00000559218 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
CLPX-205ENST00000559218 TRIM28Q13263 835 aaKnown RBP11.24□□□□□ -0.61
CLPX-205ENST00000559218 DGKZQ13574 1117 aa11.24□□□□□ -0.61
CLPX-205ENST00000559218 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
CLPX-205ENST00000559218 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
CLPX-205ENST00000559218 GBA2Q9HCG7 927 aaPredicted RBP11.24□□□□□ -0.61
CLPX-205ENST00000559218 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
CLPX-205ENST00000559218 MYBBP1AQ9BQG0 1328 aaKnown RBP11.24□□□□□ -0.61
CLPX-205ENST00000559218 UFL1O94874 794 aa11.23□□□□□ -0.61
CLPX-205ENST00000559218 VIL1P09327 827 aaKnown RBP11.23□□□□□ -0.61
CLPX-205ENST00000559218 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
CLPX-205ENST00000559218 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLPX-205ENST00000559218 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
CLPX-205ENST00000559218 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
CLPX-205ENST00000559218 DCPSQ96C86 337 aaKnown RBP11.23□□□□□ -0.61
CLPX-205ENST00000559218 EYA3Q99504 573 aa11.23□□□□□ -0.61
CLPX-205ENST00000559218 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
CLPX-205ENST00000559218 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
CLPX-205ENST00000559218 SLC34A2O95436 690 aa11.22□□□□□ -0.61
CLPX-205ENST00000559218 ZNF157P51786 506 aaPredicted RBP11.22□□□□□ -0.61
CLPX-205ENST00000559218 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
CLPX-205ENST00000559218 RIC3Q7Z5B4 369 aa11.22□□□□□ -0.61
CLPX-205ENST00000559218 C2orf69Q8N8R5 385 aa11.22□□□□□ -0.61
CLPX-205ENST00000559218 ZBTB38Q8NAP3 1195 aaPredicted RBP11.22□□□□□ -0.61
CLPX-205ENST00000559218 CCDC85AQ96PX6 553 aaPredicted RBP11.22□□□□□ -0.61
CLPX-205ENST00000559218 ZC3H12CQ9C0D7 883 aaKnown RBP11.22□□□□□ -0.61
CLPX-205ENST00000559218 GGA3Q9NZ52 723 aa11.22□□□□□ -0.61
CLPX-205ENST00000559218 PODXL2Q9NZ53 605 aa11.22□□□□□ -0.61
CLPX-205ENST00000559218 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
CLPX-205ENST00000559218 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
CLPX-205ENST00000559218 ELL2O00472 640 aaPredicted RBP11.21□□□□□ -0.61
CLPX-205ENST00000559218 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
CLPX-205ENST00000559218 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
CLPX-205ENST00000559218 CDCA5Q96FF9 252 aa11.21□□□□□ -0.61
CLPX-205ENST00000559218 MYD88Q99836 296 aa11.21□□□□□ -0.61
CLPX-205ENST00000559218 RNF186Q9NXI6 227 aa11.21□□□□□ -0.61
CLPX-205ENST00000559218 PDE4DIPQ5VU43 2346 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 SCN9AQ15858 1988 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 TRPA1O75762 1119 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 ZNF280AP59817 542 aaPredicted RBP11.2□□□□□ -0.62
CLPX-205ENST00000559218 SCARF1Q14162 830 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 SULF1Q8IWU6 871 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 GGA1Q9UJY5 639 aa11.2□□□□□ -0.62
CLPX-205ENST00000559218 SCAF8Q9UPN6 1271 aaKnown RBP11.2□□□□□ -0.62
CLPX-205ENST00000559218 G3V3G9 751 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
CLPX-205ENST00000559218 SLC10A3P09131 477 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 CLCN6P51797 869 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
CLPX-205ENST00000559218 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
CLPX-205ENST00000559218 C8orf58Q8NAV2 365 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 CSRNP1Q96S65 589 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 GMLQ99445 158 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms