RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 SYAP1Q96A49 352 aaPredicted RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 PUS3Q9BZE2 481 aaKnown RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 ZBTB1Q9Y2K1 713 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
CLPX-204ENST00000559152 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
CLPX-204ENST00000559152 SYT1P21579 422 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 CTSWP56202 376 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 ZMYM1Q5SVZ6 1142 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 TRMT112Q9UI30 125 aaKnown RBP13.44□□□□□ -0.26
CLPX-204ENST00000559152 IRS4O14654 1257 aaPredicted RBP13.44□□□□□ -0.26
CLPX-204ENST00000559152 PDE8AO60658 829 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 ADAMTS2O95450 1211 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 GJB2P29033 226 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 ME3Q16798 604 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 BARGINQ6ZT62 677 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
CLPX-204ENST00000559152 GPTP24298 496 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 TMEM87AQ8NBN3 555 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 ANP32BQ92688 251 aaKnown RBP13.43□□□□□ -0.26
CLPX-204ENST00000559152 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
CLPX-204ENST00000559152 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 LARGE1O95461 756 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 ITGA6P23229 1130 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 HSPA1LP34931 641 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
CLPX-204ENST00000559152 ZNF512BQ96KM6 892 aaPredicted RBP13.43□□□□□ -0.26
CLPX-204ENST00000559152 F13A1P00488 732 aa13.42□□□□□ -0.26
CLPX-204ENST00000559152 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
CLPX-204ENST00000559152 METTL24Q5JXM2 366 aa13.42□□□□□ -0.26
CLPX-204ENST00000559152 GAS2L3Q86XJ1 694 aa13.42□□□□□ -0.26
CLPX-204ENST00000559152 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
CLPX-204ENST00000559152 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
CLPX-204ENST00000559152 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
CLPX-204ENST00000559152 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
CLPX-204ENST00000559152 RIPOR2Q9Y4F9 1068 aa13.42□□□□□ -0.26
CLPX-204ENST00000559152 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLPX-204ENST00000559152 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 SEC62Q99442 399 aaKnown RBP13.41□□□□□ -0.26
CLPX-204ENST00000559152 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 CTNNA3Q9UI47 895 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 PHF14O94880 888 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 CYP21A2P08686 494 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 CCDC129Q6ZRS4 1044 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 GREM2Q9H772 168 aa13.41□□□□□ -0.26
CLPX-204ENST00000559152 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
CLPX-204ENST00000559152 PARP10Q53GL7 1025 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLPX-204ENST00000559152 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 SIK1P57059 783 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
CLPX-204ENST00000559152 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
CLPX-204ENST00000559152 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
CLPX-204ENST00000559152 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
CLPX-204ENST00000559152 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
CLPX-204ENST00000559152 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
CLPX-204ENST00000559152 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
CLPX-204ENST00000559152 USP48Q86UV5 1035 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 MARCH10Q8NA82 808 aaPredicted RBP13.39□□□□□ -0.27
CLPX-204ENST00000559152 MAST3O60307 1309 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 PDE8BO95263 885 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 ADORA1P30542 326 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
CLPX-204ENST00000559152 FGD1P98174 961 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 UTP14AQ9BVJ6 771 aaKnown RBP13.39□□□□□ -0.27
CLPX-204ENST00000559152 PANK2Q9BZ23 570 aa13.39□□□□□ -0.27
CLPX-204ENST00000559152 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 SLIT2O94813 1529 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
CLPX-204ENST00000559152 ST3GAL1Q11201 340 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 Q6ZUG5 572 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 APPBP2Q92624 585 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 TAF6LQ9Y6J9 622 aa13.38□□□□□ -0.27
CLPX-204ENST00000559152 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
CLPX-204ENST00000559152 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
CLPX-204ENST00000559152 UBE2HP62256 183 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms