RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CELF1Q92879 486 aaKnown RBP15.34■□□□□ 0.05
TPM1-216ENST00000558910 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 GRAPQ13588 217 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 ZBTB38Q8NAP3 1195 aaPredicted RBP15.33■□□□□ 0.04
TPM1-216ENST00000558910 CCDC191Q8NCU4 936 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
TPM1-216ENST00000558910 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
TPM1-216ENST00000558910 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 AOC3Q16853 763 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 SLC4A10Q6U841 1118 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
TPM1-216ENST00000558910 BCL2L13Q9BXK5 485 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 MFRPQ9BY79 579 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 ATP6V0A2Q9Y487 856 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 RIC1Q4ADV7 1423 aa15.32■□□□□ 0.04
TPM1-216ENST00000558910 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 TAF1P21675 1872 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
TPM1-216ENST00000558910 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
TPM1-216ENST00000558910 UBE3BQ7Z3V4 1068 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 MPNDQ8N594 471 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 FBXO22Q8NEZ5 403 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 DNAAF4Q8WXU2 420 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 FAM163AQ96GL9 167 aaPredicted RBP15.31■□□□□ 0.04
TPM1-216ENST00000558910 GPR101Q96P66 508 aaPredicted RBP15.31■□□□□ 0.04
TPM1-216ENST00000558910 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
TPM1-216ENST00000558910 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
TPM1-216ENST00000558910 BBOX1O75936 387 aa15.3■□□□□ 0.04
TPM1-216ENST00000558910 LAMB2P55268 1798 aa15.3■□□□□ 0.04
TPM1-216ENST00000558910 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
TPM1-216ENST00000558910 E9PSI1 815 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 C6orf229H3BNL8 230 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 PDE8AO60658 829 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 TOMM70O94826 608 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 VEGFAP15692 232 aaPredicted RBP15.29■□□□□ 0.04
TPM1-216ENST00000558910 SF3B3Q15393 1217 aaKnown RBP15.29■□□□□ 0.04
TPM1-216ENST00000558910 LCE2DQ5TA82 110 aaPredicted RBP15.29■□□□□ 0.04
TPM1-216ENST00000558910 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 SP8Q8IXZ3 490 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 PSMD1Q99460 953 aa15.29■□□□□ 0.04
TPM1-216ENST00000558910 ZC3H4Q9UPT8 1303 aaKnown RBP15.28■□□□□ 0.04
TPM1-216ENST00000558910 EIF6P56537 245 aaKnown RBP15.28■□□□□ 0.04
TPM1-216ENST00000558910 HTRA3P83110 453 aa15.28■□□□□ 0.04
TPM1-216ENST00000558910 SLFN5Q08AF3 891 aa15.28■□□□□ 0.04
TPM1-216ENST00000558910 CCDC152Q4G0S7 254 aa15.28■□□□□ 0.04
TPM1-216ENST00000558910 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
TPM1-216ENST00000558910 NIM1KQ8IY84 436 aa15.28■□□□□ 0.04
TPM1-216ENST00000558910 CHMP3Q9Y3E7 222 aa15.28■□□□□ 0.04
TPM1-216ENST00000558910 DDX60Q8IY21 1712 aaKnown RBP15.28■□□□□ 0.04
TPM1-216ENST00000558910 POTECB2RU33 542 aa15.27■□□□□ 0.04
TPM1-216ENST00000558910 RPS8P62241 208 aaKnown RBP15.27■□□□□ 0.04
TPM1-216ENST00000558910 GPSM2P81274 684 aa15.27■□□□□ 0.04
TPM1-216ENST00000558910 GCKRQ14397 625 aa15.27■□□□□ 0.04
TPM1-216ENST00000558910 TMEM121BQ9BXQ6 578 aaPredicted RBP15.27■□□□□ 0.04
TPM1-216ENST00000558910 COL4A1P02462 1669 aa15.27■□□□□ 0.03
TPM1-216ENST00000558910 CTSWP56202 376 aa15.26■□□□□ 0.03
TPM1-216ENST00000558910 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
TPM1-216ENST00000558910 HS6ST3Q8IZP7 471 aa15.26■□□□□ 0.03
TPM1-216ENST00000558910 GREM2Q9H772 168 aa15.26■□□□□ 0.03
TPM1-216ENST00000558910 ANKIB1Q9P2G1 1089 aa15.26■□□□□ 0.03
TPM1-216ENST00000558910 CEP350Q5VT06 3117 aa15.26■□□□□ 0.03
TPM1-216ENST00000558910 RAD17O75943 681 aa15.25■□□□□ 0.03
TPM1-216ENST00000558910 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
TPM1-216ENST00000558910 HSPA6P17066 643 aa15.25■□□□□ 0.03
TPM1-216ENST00000558910 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM1-216ENST00000558910 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
TPM1-216ENST00000558910 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
TPM1-216ENST00000558910 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
TPM1-216ENST00000558910 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
TPM1-216ENST00000558910 COL4A5P29400 1685 aa15.25■□□□□ 0.03
TPM1-216ENST00000558910 H7C1W4 665 aa15.24■□□□□ 0.03
TPM1-216ENST00000558910 ANKRD18AQ8IVF6 992 aa15.24■□□□□ 0.03
TPM1-216ENST00000558910 LINS1Q8NG48 757 aa15.24■□□□□ 0.03
TPM1-216ENST00000558910 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
TPM1-216ENST00000558910 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
TPM1-216ENST00000558910 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
TPM1-216ENST00000558910 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
TPM1-216ENST00000558910 DICER1Q9UPY3 1922 aaKnown RBP15.23■□□□□ 0.03
TPM1-216ENST00000558910 CDHR2Q9BYE9 1310 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 FZD9O00144 591 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 UFL1O94874 794 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 FAM161AQ3B820 660 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 BEND3Q5T5X7 828 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
TPM1-216ENST00000558910 POLLQ9UGP5 575 aa15.23■□□□□ 0.03
TPM1-216ENST00000558910 WASHC4Q2M389 1173 aa15.22■□□□□ 0.03
TPM1-216ENST00000558910 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
TPM1-216ENST00000558910 SMC1BQ8NDV3 1235 aa15.22■□□□□ 0.03
TPM1-216ENST00000558910 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
TPM1-216ENST00000558910 WTIPA6NIX2 430 aaPredicted RBP15.21■□□□□ 0.03
TPM1-216ENST00000558910 LMOD1P29536 600 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms