RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 GCC1Q96CN9 775 aa9.47□□□□□ -0.89
LRRC28-211ENST00000558890 ARFGEF1Q9Y6D6 1849 aa9.47□□□□□ -0.89
LRRC28-211ENST00000558890 BBOX1O75936 387 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 NBPF7P0C2Y1 421 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-211ENST00000558890 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 UBE3BQ7Z3V4 1068 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 TMC4Q7Z404 712 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 CELF1Q92879 486 aaKnown RBP9.46□□□□□ -0.9
LRRC28-211ENST00000558890 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.9
LRRC28-211ENST00000558890 MEIS3Q99687 375 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 LTBP3Q9NS15 1303 aa9.46□□□□□ -0.9
LRRC28-211ENST00000558890 EIF5BO60841 1220 aaKnown RBP9.45□□□□□ -0.9
LRRC28-211ENST00000558890 HMMRO75330 724 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 CTSWP56202 376 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 NUCB1Q02818 461 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 GRAPQ13588 217 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 CCDC152Q4G0S7 254 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 SP8Q8IXZ3 490 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-211ENST00000558890 ATP6V0A2Q9Y487 856 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 A0A1B0GUL6 1792 aa9.45□□□□□ -0.9
LRRC28-211ENST00000558890 NPHP1O15259 732 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 RPS8P62241 208 aaKnown RBP9.44□□□□□ -0.9
LRRC28-211ENST00000558890 RASSF7Q02833 373 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 ANKRD44Q8N8A2 993 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 TBC1D32Q96NH3 1257 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 PSMD1Q99460 953 aa9.44□□□□□ -0.9
LRRC28-211ENST00000558890 RTFDC1Q9BY42 306 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-211ENST00000558890 CHD4Q14839 1912 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 SBF1O95248 1867 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 TAF1P21675 1872 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 FER1L6Q2WGJ9 1857 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 DEKP35659 375 aaKnown RBP9.43□□□□□ -0.9
LRRC28-211ENST00000558890 ATP8B2P98198 1209 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 HSP90AB4PQ58FF6 505 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 CEP85Q6P2H3 762 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
LRRC28-211ENST00000558890 RPGRQ92834 1020 aaKnown RBP9.43□□□□□ -0.9
LRRC28-211ENST00000558890 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 GREM2Q9H772 168 aa9.43□□□□□ -0.9
LRRC28-211ENST00000558890 LTBP1Q14766 1721 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 WTIPA6NIX2 430 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-211ENST00000558890 CIAO1O76071 339 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 YY1P25490 414 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 FKBP4Q02790 459 aaKnown RBP eCLIP9.42□□□□□ -0.9
LRRC28-211ENST00000558890 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 SOGA3Q5TF21 947 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 RTKN2Q8IZC4 609 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 CDC5LQ99459 802 aaKnown RBP9.42□□□□□ -0.9
LRRC28-211ENST00000558890 LNPKQ9C0E8 428 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 BICC1Q9H694 974 aaKnown RBP9.42□□□□□ -0.9
LRRC28-211ENST00000558890 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 LRRFIP2Q9Y608 721 aaKnown RBP9.42□□□□□ -0.9
LRRC28-211ENST00000558890 ARAP2Q8WZ64 1704 aa9.42□□□□□ -0.9
LRRC28-211ENST00000558890 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-211ENST00000558890 SEC24BO95487 1268 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 LMNB1P20700 586 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
LRRC28-211ENST00000558890 IFIT5Q13325 482 aaKnown RBP9.41□□□□□ -0.9
LRRC28-211ENST00000558890 CCDC57Q2TAC2 916 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 ANKRD45Q5TZF3 282 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 LMBR1LQ6UX01 489 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-211ENST00000558890 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-211ENST00000558890 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-211ENST00000558890 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 POLLQ9UGP5 575 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
LRRC28-211ENST00000558890 COL4A5P29400 1685 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 ANKRD18BA2A2Z9 1011 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 POTECB2RU33 542 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 ITGA6P23229 1130 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-211ENST00000558890 GPSM2P81274 684 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 ERC1Q8IUD2 1116 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 TAOK3Q9H2K8 898 aa9.4□□□□□ -0.9
LRRC28-211ENST00000558890 ZNF277Q9NRM2 450 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-211ENST00000558890 SPEF2Q9C093 1822 aa9.4□□□□□ -0.91
LRRC28-211ENST00000558890 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 FZD9O00144 591 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 SRGAP3O43295 1099 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 DCTPP1Q9H773 170 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 RNF181Q9P0P0 153 aa9.39□□□□□ -0.91
LRRC28-211ENST00000558890 CACNA1SQ13698 1873 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 DUOX1Q9NRD9 1551 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 MROH5Q6ZUA9 1318 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 IGHMBP2P38935 993 aaKnown RBP9.38□□□□□ -0.91
LRRC28-211ENST00000558890 IL15P40933 162 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms