RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TNIP1Q15025 636 aa21.73■■□□□ 1.07
LRRC28-210ENST00000558879 MAP1SQ66K74 1059 aaPredicted RBP21.73■■□□□ 1.07
LRRC28-210ENST00000558879 ANKRD18AQ8IVF6 992 aa21.73■■□□□ 1.07
LRRC28-210ENST00000558879 ADARB2Q9NS39 739 aaKnown RBP21.73■■□□□ 1.07
LRRC28-210ENST00000558879 CLEC11AQ9Y240 323 aa21.73■■□□□ 1.07
LRRC28-210ENST00000558879 C6orf229H3BNL8 230 aa21.72■■□□□ 1.07
LRRC28-210ENST00000558879 CNTROBQ8N137 903 aa21.72■■□□□ 1.07
LRRC28-210ENST00000558879 GPR101Q96P66 508 aaPredicted RBP21.72■■□□□ 1.07
LRRC28-210ENST00000558879 CDC5LQ99459 802 aaKnown RBP21.72■■□□□ 1.07
LRRC28-210ENST00000558879 GREM2Q9H772 168 aa21.72■■□□□ 1.07
LRRC28-210ENST00000558879 DBNDD1Q9H9R9 158 aa21.72■■□□□ 1.07
LRRC28-210ENST00000558879 CNTNAP1P78357 1384 aa21.72■■□□□ 1.07
LRRC28-210ENST00000558879 ECE2O60344 883 aa21.71■■□□□ 1.07
LRRC28-210ENST00000558879 XDHP47989 1333 aa21.71■■□□□ 1.07
LRRC28-210ENST00000558879 UFL1O94874 794 aa21.7■■□□□ 1.06
LRRC28-210ENST00000558879 BEND3Q5T5X7 828 aa21.7■■□□□ 1.06
LRRC28-210ENST00000558879 GGA1Q9UJY5 639 aa21.7■■□□□ 1.06
LRRC28-210ENST00000558879 TMEM88BA6NKF7 163 aa21.69■■□□□ 1.06
LRRC28-210ENST00000558879 F6X3S4 739 aa21.69■■□□□ 1.06
LRRC28-210ENST00000558879 RIMBP2O15034 1052 aa21.69■■□□□ 1.06
LRRC28-210ENST00000558879 BSDC1Q9NW68 430 aaPredicted RBP21.69■■□□□ 1.06
LRRC28-210ENST00000558879 PSMD14O00487 310 aa21.68■■□□□ 1.06
LRRC28-210ENST00000558879 CSF1RP07333 972 aa21.68■■□□□ 1.06
LRRC28-210ENST00000558879 ANKIB1Q9P2G1 1089 aa21.68■■□□□ 1.06
LRRC28-210ENST00000558879 MED23Q9ULK4 1368 aa21.68■■□□□ 1.06
LRRC28-210ENST00000558879 ECM29Q5VYK3 1845 aa21.67■■□□□ 1.06
LRRC28-210ENST00000558879 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
LRRC28-210ENST00000558879 DPF2Q92785 391 aa21.67■■□□□ 1.06
LRRC28-210ENST00000558879 BCL2L13Q9BXK5 485 aa21.67■■□□□ 1.06
LRRC28-210ENST00000558879 ZC3H12CQ9C0D7 883 aaKnown RBP21.67■■□□□ 1.06
LRRC28-210ENST00000558879 SHTN1A0MZ66 631 aa21.66■■□□□ 1.06
LRRC28-210ENST00000558879 DOK7Q18PE1 504 aa21.66■■□□□ 1.06
LRRC28-210ENST00000558879 TRPM4Q8TD43 1214 aa21.66■■□□□ 1.06
LRRC28-210ENST00000558879 PGAP2Q9UHJ9 254 aa21.66■■□□□ 1.06
LRRC28-210ENST00000558879 MINPP1Q9UNW1 487 aa21.66■■□□□ 1.06
LRRC28-210ENST00000558879 E9PSI1 815 aa21.65■■□□□ 1.06
LRRC28-210ENST00000558879 CCER2I3L3R5 266 aa21.65■■□□□ 1.06
LRRC28-210ENST00000558879 ITGA6P23229 1130 aa21.65■■□□□ 1.06
LRRC28-210ENST00000558879 ATP2B4P23634 1241 aa21.65■■□□□ 1.06
LRRC28-210ENST00000558879 RPS12P25398 132 aaKnown RBP21.65■■□□□ 1.06
LRRC28-210ENST00000558879 HIRAP54198 1017 aaPredicted RBP21.65■■□□□ 1.06
LRRC28-210ENST00000558879 KCNQ5Q9NR82 932 aa21.65■■□□□ 1.06
LRRC28-210ENST00000558879 MKRN1Q9UHC7 482 aaKnown RBP21.65■■□□□ 1.06
LRRC28-210ENST00000558879 CNOT7Q9UIV1 285 aaKnown RBP21.65■■□□□ 1.06
LRRC28-210ENST00000558879 ZBTB12Q9Y330 459 aaPredicted RBP21.65■■□□□ 1.06
LRRC28-210ENST00000558879 ARAP2Q8WZ64 1704 aa21.65■■□□□ 1.06
LRRC28-210ENST00000558879 MICALL2Q8IY33 904 aa21.64■■□□□ 1.05
LRRC28-210ENST00000558879 VIL1P09327 827 aaKnown RBP21.63■■□□□ 1.05
LRRC28-210ENST00000558879 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
LRRC28-210ENST00000558879 ZC3H15Q8WU90 426 aaKnown RBP21.63■■□□□ 1.05
LRRC28-210ENST00000558879 RASSF10A6NK89 507 aa21.62■■□□□ 1.05
LRRC28-210ENST00000558879 IGHMBP2P38935 993 aaKnown RBP21.62■■□□□ 1.05
LRRC28-210ENST00000558879 CCT4P50991 539 aaKnown RBP21.62■■□□□ 1.05
LRRC28-210ENST00000558879 FOXO4P98177 505 aa21.62■■□□□ 1.05
LRRC28-210ENST00000558879 FMR1Q06787 632 aaKnown RBP eCLIP21.62■■□□□ 1.05
LRRC28-210ENST00000558879 WTIPA6NIX2 430 aaPredicted RBP21.61■■□□□ 1.05
LRRC28-210ENST00000558879 H7C1D1 291 aa21.61■■□□□ 1.05
LRRC28-210ENST00000558879 GRM8O00222 908 aa21.61■■□□□ 1.05
LRRC28-210ENST00000558879 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
LRRC28-210ENST00000558879 MRPL50Q8N5N7 158 aaKnown RBP21.61■■□□□ 1.05
LRRC28-210ENST00000558879 TRAF5O00463 557 aa21.6■■□□□ 1.05
LRRC28-210ENST00000558879 EGFRP00533 1210 aa21.6■■□□□ 1.05
LRRC28-210ENST00000558879 HSPA1AP0DMV8 641 aaKnown RBP21.6■■□□□ 1.05
LRRC28-210ENST00000558879 HSPA1BP0DMV9 641 aaKnown RBP21.6■■□□□ 1.05
LRRC28-210ENST00000558879 EPHA10Q5JZY3 1008 aa21.59■■□□□ 1.05
LRRC28-210ENST00000558879 PODNQ7Z5L7 613 aa21.59■■□□□ 1.05
LRRC28-210ENST00000558879 TRMT2AQ8IZ69 625 aaKnown RBP21.59■■□□□ 1.05
LRRC28-210ENST00000558879 LEMD3Q9Y2U8 911 aa21.59■■□□□ 1.05
LRRC28-210ENST00000558879 PTPRCP08575 1304 aa21.58■■□□□ 1.05
LRRC28-210ENST00000558879 ANKRD18BA2A2Z9 1011 aa21.58■■□□□ 1.05
LRRC28-210ENST00000558879 CST9Q5W186 159 aa21.58■■□□□ 1.05
LRRC28-210ENST00000558879 SAMD7Q7Z3H4 446 aa21.58■■□□□ 1.05
LRRC28-210ENST00000558879 GLIS2Q9BZE0 524 aaPredicted RBP21.58■■□□□ 1.05
LRRC28-210ENST00000558879 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.05
LRRC28-210ENST00000558879 MYH13Q9UKX3 1938 aa21.58■■□□□ 1.04
LRRC28-210ENST00000558879 UTYO14607 1347 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 IRS2Q9Y4H2 1338 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 G3V3G9 751 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 VEGFBP49765 207 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 DCAF8Q5TAQ9 597 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 RSBN1LQ6PCB5 846 aaPredicted RBP21.57■■□□□ 1.04
LRRC28-210ENST00000558879 AGBL3Q8NEM8 1001 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 CDCA7LQ96GN5 454 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 GMLQ99445 158 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 MPHOSPH8Q99549 860 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 ANKRD2Q9GZV1 360 aa21.57■■□□□ 1.04
LRRC28-210ENST00000558879 ZNF804BA4D1E1 1349 aa21.56■■□□□ 1.04
LRRC28-210ENST00000558879 CHRNDQ07001 517 aa21.56■■□□□ 1.04
LRRC28-210ENST00000558879 TBC1D10BQ4KMP7 808 aaPredicted RBP21.56■■□□□ 1.04
LRRC28-210ENST00000558879 SLC4A10Q6U841 1118 aa21.56■■□□□ 1.04
LRRC28-210ENST00000558879 TXNRD3Q86VQ6 643 aa21.56■■□□□ 1.04
LRRC28-210ENST00000558879 SSH1Q8WYL5 1049 aa21.56■■□□□ 1.04
LRRC28-210ENST00000558879 ZNF280AP59817 542 aaPredicted RBP21.55■■□□□ 1.04
LRRC28-210ENST00000558879 IFIT5Q13325 482 aaKnown RBP21.55■■□□□ 1.04
LRRC28-210ENST00000558879 KIF4BQ2VIQ3 1234 aa21.55■■□□□ 1.04
LRRC28-210ENST00000558879 DEFB115Q30KQ5 88 aa21.55■■□□□ 1.04
LRRC28-210ENST00000558879 LMBR1LQ6UX01 489 aa21.55■■□□□ 1.04
LRRC28-210ENST00000558879 CDC37L1Q7L3B6 337 aa21.55■■□□□ 1.04
LRRC28-210ENST00000558879 ABT1Q9ULW3 272 aaKnown RBP21.55■■□□□ 1.04
LRRC28-210ENST00000558879 TLL2Q9Y6L7 1015 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms