RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 G3V3G9 751 aa19.92■□□□□ 0.78
CPNE6-208ENST00000558795 EGFRP00533 1210 aa19.92■□□□□ 0.78
CPNE6-208ENST00000558795 HOXB7P09629 217 aa19.92■□□□□ 0.78
CPNE6-208ENST00000558795 DCAF8Q5TAQ9 597 aa19.92■□□□□ 0.78
CPNE6-208ENST00000558795 ZC3H12CQ9C0D7 883 aaKnown RBP19.92■□□□□ 0.78
CPNE6-208ENST00000558795 RTL9Q8NET4 1388 aa19.92■□□□□ 0.78
CPNE6-208ENST00000558795 IRS4O14654 1257 aaPredicted RBP19.91■□□□□ 0.78
CPNE6-208ENST00000558795 ZNF157P51786 506 aaPredicted RBP19.91■□□□□ 0.78
CPNE6-208ENST00000558795 RPS8P62241 208 aaKnown RBP19.91■□□□□ 0.78
CPNE6-208ENST00000558795 KIF4BQ2VIQ3 1234 aa19.91■□□□□ 0.78
CPNE6-208ENST00000558795 SULF1Q8IWU6 871 aa19.91■□□□□ 0.78
CPNE6-208ENST00000558795 TBC1D16Q8TBP0 767 aa19.91■□□□□ 0.78
CPNE6-208ENST00000558795 KCNQ5Q9NR82 932 aa19.91■□□□□ 0.78
CPNE6-208ENST00000558795 HYPKQ9NX55 129 aa19.91■□□□□ 0.78
CPNE6-208ENST00000558795 SAGE1Q9NXZ1 904 aa19.91■□□□□ 0.78
CPNE6-208ENST00000558795 FAM155AB1AL88 458 aaPredicted RBP19.9■□□□□ 0.78
CPNE6-208ENST00000558795 KIF23Q02241 960 aaPredicted RBP19.9■□□□□ 0.78
CPNE6-208ENST00000558795 COL4A1P02462 1669 aa19.9■□□□□ 0.78
CPNE6-208ENST00000558795 RUNDC1Q96C34 613 aa19.89■□□□□ 0.77
CPNE6-208ENST00000558795 GGA3Q9NZ52 723 aa19.89■□□□□ 0.77
CPNE6-208ENST00000558795 AKAP11Q9UKA4 1901 aa19.89■□□□□ 0.77
CPNE6-208ENST00000558795 TRIM35Q9UPQ4 493 aa19.89■□□□□ 0.77
CPNE6-208ENST00000558795 HSP90B1P14625 803 aaKnown RBP19.88■□□□□ 0.77
CPNE6-208ENST00000558795 TRIM28Q13263 835 aaKnown RBP19.88■□□□□ 0.77
CPNE6-208ENST00000558795 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
CPNE6-208ENST00000558795 ANKIB1Q9P2G1 1089 aa19.88■□□□□ 0.77
CPNE6-208ENST00000558795 SCN9AQ15858 1988 aa19.88■□□□□ 0.77
CPNE6-208ENST00000558795 TRPA1O75762 1119 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 UFL1O94874 794 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 VIL1P09327 827 aaKnown RBP19.87■□□□□ 0.77
CPNE6-208ENST00000558795 GOLGA2Q08379 1002 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 RIC3Q7Z5B4 369 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 ZBTB38Q8NAP3 1195 aaPredicted RBP19.87■□□□□ 0.77
CPNE6-208ENST00000558795 PODXL2Q9NZ53 605 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 GGA1Q9UJY5 639 aa19.87■□□□□ 0.77
CPNE6-208ENST00000558795 SLC10A3P09131 477 aa19.86■□□□□ 0.77
CPNE6-208ENST00000558795 CDCA5Q96FF9 252 aa19.86■□□□□ 0.77
CPNE6-208ENST00000558795 RNF186Q9NXI6 227 aa19.86■□□□□ 0.77
CPNE6-208ENST00000558795 MYBBP1AQ9BQG0 1328 aaKnown RBP19.85■□□□□ 0.77
CPNE6-208ENST00000558795 SEC31BQ9NQW1 1179 aa19.85■□□□□ 0.77
CPNE6-208ENST00000558795 ASTN2O75129 1339 aaPredicted RBP19.84■□□□□ 0.77
CPNE6-208ENST00000558795 CCDC152Q4G0S7 254 aa19.84■□□□□ 0.77
CPNE6-208ENST00000558795 ANGEL2Q5VTE6 544 aaKnown RBP19.84■□□□□ 0.77
CPNE6-208ENST00000558795 RSBN1LQ6PCB5 846 aaPredicted RBP19.83■□□□□ 0.77
CPNE6-208ENST00000558795 AGBL3Q8NEM8 1001 aa19.83■□□□□ 0.77
CPNE6-208ENST00000558795 MYD88Q99836 296 aa19.83■□□□□ 0.77
CPNE6-208ENST00000558795 PSME4Q14997 1843 aa19.82■□□□□ 0.76
CPNE6-208ENST00000558795 ZNF280AP59817 542 aaPredicted RBP19.82■□□□□ 0.76
CPNE6-208ENST00000558795 SCARF1Q14162 830 aa19.82■□□□□ 0.76
CPNE6-208ENST00000558795 REM2Q8IYK8 340 aaPredicted RBP19.82■□□□□ 0.76
CPNE6-208ENST00000558795 CSRNP1Q96S65 589 aa19.82■□□□□ 0.76
CPNE6-208ENST00000558795 MBIPQ9NS73 344 aa19.82■□□□□ 0.76
CPNE6-208ENST00000558795 ZNF609O15014 1411 aa19.82■□□□□ 0.76
CPNE6-208ENST00000558795 SOX10P56693 466 aa19.81■□□□□ 0.76
CPNE6-208ENST00000558795 FKBP1BP68106 108 aa19.81■□□□□ 0.76
CPNE6-208ENST00000558795 CCDC191Q8NCU4 936 aa19.81■□□□□ 0.76
CPNE6-208ENST00000558795 CCDC85AQ96PX6 553 aaPredicted RBP19.81■□□□□ 0.76
CPNE6-208ENST00000558795 PAPPA2Q9BXP8 1791 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 XDHP47989 1333 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 PDE8AO60658 829 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 PCCAP05165 728 aaPredicted RBP19.8■□□□□ 0.76
CPNE6-208ENST00000558795 USP17L8P0C7I0 530 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 CTU1Q7Z7A3 348 aaKnown RBP19.8■□□□□ 0.76
CPNE6-208ENST00000558795 RASAL3Q86YV0 1011 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 ANKRD18AQ8IVF6 992 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 PHAXQ9H814 394 aaKnown RBP19.8■□□□□ 0.76
CPNE6-208ENST00000558795 MYOZ2Q9NPC6 264 aa19.8■□□□□ 0.76
CPNE6-208ENST00000558795 CWC25Q9NXE8 425 aaPredicted RBP19.79■□□□□ 0.76
CPNE6-208ENST00000558795 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
CPNE6-208ENST00000558795 PDE4DIPQ5VU43 2346 aa19.79■□□□□ 0.76
CPNE6-208ENST00000558795 PITPNM2Q9BZ72 1349 aa19.78■□□□□ 0.76
CPNE6-208ENST00000558795 USP17L3A6NCW0 530 aa19.78■□□□□ 0.76
CPNE6-208ENST00000558795 USP17L4A6NCW7 530 aa19.78■□□□□ 0.76
CPNE6-208ENST00000558795 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
CPNE6-208ENST00000558795 ANP32CO43423 234 aa19.78■□□□□ 0.76
CPNE6-208ENST00000558795 ATP2B4P23634 1241 aa19.78■□□□□ 0.76
CPNE6-208ENST00000558795 USP17L1Q7RTZ2 530 aa19.78■□□□□ 0.76
CPNE6-208ENST00000558795 JARID2Q92833 1246 aaPredicted RBP19.78■□□□□ 0.76
CPNE6-208ENST00000558795 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
CPNE6-208ENST00000558795 CALD1Q05682 793 aaKnown RBP19.77■□□□□ 0.76
CPNE6-208ENST00000558795 PODNQ7Z5L7 613 aa19.77■□□□□ 0.76
CPNE6-208ENST00000558795 GMLQ99445 158 aa19.77■□□□□ 0.76
CPNE6-208ENST00000558795 ZNF853P0CG23 659 aa19.76■□□□□ 0.75
CPNE6-208ENST00000558795 IFT57Q9NWB7 429 aa19.76■□□□□ 0.75
CPNE6-208ENST00000558795 GNAI1P63096 354 aa19.75■□□□□ 0.75
CPNE6-208ENST00000558795 TTLL12Q14166 644 aaPredicted RBP19.75■□□□□ 0.75
CPNE6-208ENST00000558795 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
CPNE6-208ENST00000558795 CDC5LQ99459 802 aaKnown RBP19.75■□□□□ 0.75
CPNE6-208ENST00000558795 METTL22Q9BUU2 404 aaPredicted RBP19.75■□□□□ 0.75
CPNE6-208ENST00000558795 CHMP4AQ9BY43 222 aa19.75■□□□□ 0.75
CPNE6-208ENST00000558795 PRKRIP1Q9H875 184 aaPredicted RBP19.75■□□□□ 0.75
CPNE6-208ENST00000558795 HDAC9Q9UKV0 1011 aa19.75■□□□□ 0.75
CPNE6-208ENST00000558795 MOB2Q70IA6 237 aa19.74■□□□□ 0.75
CPNE6-208ENST00000558795 OGFOD1Q8N543 542 aa19.74■□□□□ 0.75
CPNE6-208ENST00000558795 PCDH10Q9P2E7 1040 aa19.74■□□□□ 0.75
CPNE6-208ENST00000558795 SCAF8Q9UPN6 1271 aaKnown RBP19.74■□□□□ 0.75
CPNE6-208ENST00000558795 MED23Q9ULK4 1368 aa19.73■□□□□ 0.75
CPNE6-208ENST00000558795 UBE2Q2LH0YL09 131 aa19.73■□□□□ 0.75
CPNE6-208ENST00000558795 CTSWP56202 376 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms