RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 J3QW42 95 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 PIK3R2O00459 728 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 LILRB5O75023 590 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 KIF4AO95239 1232 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 RPLP1P05386 114 aaKnown RBP5.27□□□□□ -1.57
HERC1-203ENST00000558532 EIF2AK2P19525 551 aaKnown RBP5.27□□□□□ -1.57
HERC1-203ENST00000558532 SIK1P57059 783 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 C8orf34Q49A92 452 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 TRAIPQ9BWF2 469 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 PLVAPQ9BX97 442 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 CHRDQ9H2X0 955 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 NOP53Q9NZM5 478 aaKnown RBP5.27□□□□□ -1.57
HERC1-203ENST00000558532 CNTN3Q9P232 1028 aa5.27□□□□□ -1.57
HERC1-203ENST00000558532 KRBA1A5PL33 1030 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 SOWAHDA6NJG2 315 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 RGS9O75916 674 aaPredicted RBP5.26□□□□□ -1.57
HERC1-203ENST00000558532 ELMSAN1Q6PJG2 1045 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 C1orf127Q8N9H9 656 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 CCER1Q8TC90 406 aaPredicted RBP5.26□□□□□ -1.57
HERC1-203ENST00000558532 TTC9Q92623 222 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 PLD4Q96BZ4 506 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 SMG9Q9H0W8 520 aaKnown RBP5.26□□□□□ -1.57
HERC1-203ENST00000558532 KANSL3Q9P2N6 904 aa5.26□□□□□ -1.57
HERC1-203ENST00000558532 PCSK2P16519 638 aa5.25□□□□□ -1.57
HERC1-203ENST00000558532 USP5P45974 858 aa5.25□□□□□ -1.57
HERC1-203ENST00000558532 AAMPQ13685 434 aa5.25□□□□□ -1.57
HERC1-203ENST00000558532 PLA2G4EQ3MJ16 856 aa5.25□□□□□ -1.57
HERC1-203ENST00000558532 TTC39BQ5VTQ0 682 aaPredicted RBP5.25□□□□□ -1.57
HERC1-203ENST00000558532 ALYREFQ86V81 257 aaKnown RBP5.25□□□□□ -1.57
HERC1-203ENST00000558532 KCTD17Q8N5Z5 321 aa5.25□□□□□ -1.57
HERC1-203ENST00000558532 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
HERC1-203ENST00000558532 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 TNFRSF21O75509 655 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 GHRHP01286 108 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 IGHA2P01877 340 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 ATP11AP98196 1134 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 HYAL2Q12891 473 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 ADAMTSL4Q6UY14 1074 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 CEP120Q8N960 986 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 SALL4Q9UJQ4 1053 aa5.24□□□□□ -1.57
HERC1-203ENST00000558532 A0A0A0MRY4 1105 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 EREGO14944 169 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 SPATA31C1P0DKV0 1188 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 ACPPP15309 386 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 BAG6P46379 1132 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 EHHADHQ08426 723 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 KCNA1Q09470 495 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 MSL1Q68DK7 614 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 SNX29Q8TEQ0 813 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 FAM129BQ96TA1 746 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 RASSF4Q9H2L5 321 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 BRPF3Q9ULD4 1205 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 TRIM33Q9UPN9 1127 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 IVNS1ABPQ9Y6Y0 642 aa5.23□□□□□ -1.57
HERC1-203ENST00000558532 SPDYE3A6NKU9 549 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 GPR182O15218 404 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 NDUFB5O43674 189 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 PROCP04070 461 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 CES1P23141 567 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 CHRNA4P43681 627 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 TRAPPC3LQ5T215 181 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 DMRTC2Q8IXT2 367 aaPredicted RBP5.22□□□□□ -1.57
HERC1-203ENST00000558532 RBSNQ9H1K0 784 aa5.22□□□□□ -1.57
HERC1-203ENST00000558532 NFKBIEO00221 500 aa5.21□□□□□ -1.58
HERC1-203ENST00000558532 PHACTR2O75167 634 aa5.21□□□□□ -1.58
HERC1-203ENST00000558532 GDF6Q6KF10 455 aaPredicted RBP5.21□□□□□ -1.58
HERC1-203ENST00000558532 CD163Q86VB7 1156 aa5.21□□□□□ -1.58
HERC1-203ENST00000558532 NCAPG2Q86XI2 1143 aa5.21□□□□□ -1.58
HERC1-203ENST00000558532 FMR1NBQ8N0W7 255 aaPredicted RBP5.21□□□□□ -1.58
HERC1-203ENST00000558532 TTC16Q8NEE8 873 aa5.21□□□□□ -1.58
HERC1-203ENST00000558532 C1QTNF9BB2RNN3 333 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 DEAF1O75398 565 aaPredicted RBP5.2□□□□□ -1.58
HERC1-203ENST00000558532 TRPA1O75762 1119 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 TRIM28Q13263 835 aaKnown RBP5.2□□□□□ -1.58
HERC1-203ENST00000558532 GRIK4Q16099 956 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 PRRT3Q5FWE3 981 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 CEP135Q66GS9 1140 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 GPAT2Q6NUI2 795 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 WFDC8Q8IUA0 241 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 SPACA7Q96KW9 195 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 HHIPQ96QV1 700 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 CITED4Q96RK1 184 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 SPOCK3Q9BQ16 436 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 RBCK1Q9BYM8 510 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 PBX4Q9BYU1 374 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 ZFYVE28Q9HCC9 887 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 LATS2Q9NRM7 1088 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 DZANK1Q9NVP4 752 aa5.2□□□□□ -1.58
HERC1-203ENST00000558532 MYO15BQ96JP2 1530 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 DCAF1Q9Y4B6 1507 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 SMNDC1O75940 238 aaKnown RBP eCLIP5.19□□□□□ -1.58
HERC1-203ENST00000558532 ELNP15502 786 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 SELPP16109 830 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 ORC1Q13415 861 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 PEAR1Q5VY43 1037 aaPredicted RBP5.19□□□□□ -1.58
HERC1-203ENST00000558532 USPL1Q5W0Q7 1092 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 SHISA2Q6UWI4 295 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 DTWD1Q8N5C7 304 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 IL22RA1Q8N6P7 574 aa5.19□□□□□ -1.58
HERC1-203ENST00000558532 PMEPA1Q969W9 287 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms