RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TRIM65Q6PJ69 517 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
PCAT29-201ENST00000558411 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
PCAT29-201ENST00000558411 ADAM21Q9UKJ8 722 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
PCAT29-201ENST00000558411 LEKR1Q6ZMV7 388 aa13.05□□□□□ -0.32
PCAT29-201ENST00000558411 ENGASEQ8NFI3 743 aa13.05□□□□□ -0.32
PCAT29-201ENST00000558411 MPHOSPH8Q99549 860 aa13.05□□□□□ -0.32
PCAT29-201ENST00000558411 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
PCAT29-201ENST00000558411 SLC27A2O14975 620 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 DTNBO60941 627 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 GORABQ5T7V8 394 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 EVI5LQ96CN4 794 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 FUT8Q9BYC5 575 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 CPS1P31327 1500 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 URI1O94763 535 aaPredicted RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 SMC2O95347 1197 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 TTC31Q49AM3 519 aaPredicted RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 MYCBPQ99417 103 aaPredicted RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
PCAT29-201ENST00000558411 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
PCAT29-201ENST00000558411 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
PCAT29-201ENST00000558411 LMAN1P49257 510 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 GOLPH3LQ9H4A5 285 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 CCDC151A5D8V7 595 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 GOLGA6L9A6NEM1 432 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 H3BQV1 296 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 MAP2K7O14733 419 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 BRD3Q15059 726 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 NAA16Q6N069 864 aaPredicted RBP13.03□□□□□ -0.32
PCAT29-201ENST00000558411 BRF1Q92994 677 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 TMX1Q9H3N1 280 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
PCAT29-201ENST00000558411 NPHP4O75161 1426 aaPredicted RBP13.02□□□□□ -0.32
PCAT29-201ENST00000558411 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
PCAT29-201ENST00000558411 IFNKQ9P0W0 207 aa13.02□□□□□ -0.33
PCAT29-201ENST00000558411 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
PCAT29-201ENST00000558411 MKRN1Q9UHC7 482 aaKnown RBP13.02□□□□□ -0.33
PCAT29-201ENST00000558411 JCADQ9P266 1359 aa13.02□□□□□ -0.33
PCAT29-201ENST00000558411 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
PCAT29-201ENST00000558411 GYS2P54840 703 aa13.01□□□□□ -0.33
PCAT29-201ENST00000558411 HNRNPLLQ8WVV9 542 aaKnown RBP13.01□□□□□ -0.33
PCAT29-201ENST00000558411 CCDC34Q96HJ3 373 aa13.01□□□□□ -0.33
PCAT29-201ENST00000558411 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
PCAT29-201ENST00000558411 LLPHQ9BRT6 129 aaKnown RBP13.01□□□□□ -0.33
PCAT29-201ENST00000558411 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
PCAT29-201ENST00000558411 ABCC6O95255 1503 aa13.01□□□□□ -0.33
PCAT29-201ENST00000558411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
PCAT29-201ENST00000558411 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
PCAT29-201ENST00000558411 DIP2CQ9Y2E4 1556 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 PPP2R3AQ06190 1150 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 KRT32Q14532 448 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 CLASRPQ8N2M8 674 aaKnown RBP13□□□□□ -0.33
PCAT29-201ENST00000558411 GOLGA1Q92805 767 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
PCAT29-201ENST00000558411 PARD6BQ9BYG5 372 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 MRFAP1Q9Y605 127 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 H3BQF6 201 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 FANCGO15287 622 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 SOX12O15370 315 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 ATP2B1P20020 1258 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
PCAT29-201ENST00000558411 LONRF2Q1L5Z9 754 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 SUGP1Q8IWZ8 645 aaKnown RBP13□□□□□ -0.33
PCAT29-201ENST00000558411 FMR1NBQ8N0W7 255 aaPredicted RBP13□□□□□ -0.33
PCAT29-201ENST00000558411 FSIP1Q8NA03 581 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 SMARCC2Q8TAQ2 1214 aa13□□□□□ -0.33
PCAT29-201ENST00000558411 DDX54Q8TDD1 881 aaKnown RBP13□□□□□ -0.33
PCAT29-201ENST00000558411 A0A1W2PQ27 194 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 A0A1W2PQ64 194 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 A0A1W2PQD8 194 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 IKBKBO14920 756 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 CBFA2T2O43439 604 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 CPP00450 1065 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 TXLNAP40222 546 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 TUBB4BP68371 445 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
PCAT29-201ENST00000558411 MED23Q9ULK4 1368 aa12.99□□□□□ -0.33
PCAT29-201ENST00000558411 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 MYO1BO43795 1136 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 JAK2O60674 1132 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 EIF3JO75822 258 aaKnown RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 CORO7P57737 925 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 AXDND1Q5T1B0 1012 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms