RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
TPM1-213ENST00000558400 KIAA2012Q0VF49 1180 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 WASHC4Q2M389 1173 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 NIM1KQ8IY84 436 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 PODXL2Q9NZ53 605 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 ANKIB1Q9P2G1 1089 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 ARFGEF2Q9Y6D5 1785 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 ANKRD18BA2A2Z9 1011 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 FOXN1O15353 648 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 ITGA6P23229 1130 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 IFIT5Q13325 482 aaKnown RBP10.69□□□□□ -0.7
TPM1-213ENST00000558400 GPC2Q8N158 579 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 CCDC85AQ96PX6 553 aaPredicted RBP10.69□□□□□ -0.7
TPM1-213ENST00000558400 MPHOSPH8Q99549 860 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 ZC3H12CQ9C0D7 883 aaKnown RBP10.69□□□□□ -0.7
TPM1-213ENST00000558400 GREM2Q9H772 168 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 ZNRF3Q9ULT6 936 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 NOB1Q9ULX3 412 aaKnown RBP10.69□□□□□ -0.7
TPM1-213ENST00000558400 FER1L6Q2WGJ9 1857 aa10.69□□□□□ -0.7
TPM1-213ENST00000558400 SNED1Q8TER0 1413 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 UTYO14607 1347 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 DDNO94850 711 aaPredicted RBP10.68□□□□□ -0.7
TPM1-213ENST00000558400 ATP2B4P23634 1241 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 GPSM2P81274 684 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 FOXO4P98177 505 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 TNIP1Q15025 636 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 AOC3Q16853 763 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 CCDC57Q2TAC2 916 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
TPM1-213ENST00000558400 ANKRD2Q9GZV1 360 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 GGA1Q9UJY5 639 aa10.68□□□□□ -0.7
TPM1-213ENST00000558400 XDHP47989 1333 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 DICER1Q9UPY3 1922 aaKnown RBP10.67□□□□□ -0.7
TPM1-213ENST00000558400 G3V3G9 751 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 LMBR1LQ6UX01 489 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 TBC1D16Q8TBP0 767 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 USP44Q9H0E7 712 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 MINPP1Q9UNW1 487 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
TPM1-213ENST00000558400 PDE4DIPQ5VU43 2346 aa10.66□□□□□ -0.7
TPM1-213ENST00000558400 NBPF7P0C2Y1 421 aaPredicted RBP10.66□□□□□ -0.7
TPM1-213ENST00000558400 TAF7LQ5H9L4 462 aa10.66□□□□□ -0.7
TPM1-213ENST00000558400 PNMA8AQ86V59 439 aaPredicted RBP10.66□□□□□ -0.7
TPM1-213ENST00000558400 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
TPM1-213ENST00000558400 CHMP3Q9Y3E7 222 aa10.66□□□□□ -0.7
TPM1-213ENST00000558400 POTECB2RU33 542 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 UFL1O94874 794 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
TPM1-213ENST00000558400 CTCFP49711 727 aaPredicted RBP10.65□□□□□ -0.7
TPM1-213ENST00000558400 CXCL9Q07325 125 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 LDHAL6AQ6ZMR3 332 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 ABHD8Q96I13 439 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
TPM1-213ENST00000558400 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
TPM1-213ENST00000558400 MLLT1Q03111 559 aaPredicted RBP10.64□□□□□ -0.71
TPM1-213ENST00000558400 RABL6Q3YEC7 729 aaPredicted RBP10.64□□□□□ -0.71
TPM1-213ENST00000558400 INTS3Q68E01 1043 aaKnown RBP10.64□□□□□ -0.71
TPM1-213ENST00000558400 ATF7IPQ6VMQ6 1270 aa10.64□□□□□ -0.71
TPM1-213ENST00000558400 PODNQ7Z5L7 613 aa10.64□□□□□ -0.71
TPM1-213ENST00000558400 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
TPM1-213ENST00000558400 SUCLG2Q96I99 432 aa10.64□□□□□ -0.71
TPM1-213ENST00000558400 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
TPM1-213ENST00000558400 MKRN1Q9UHC7 482 aaKnown RBP10.64□□□□□ -0.71
TPM1-213ENST00000558400 DDX60Q8IY21 1712 aaKnown RBP10.64□□□□□ -0.71
TPM1-213ENST00000558400 CNTNAP1P78357 1384 aa10.64□□□□□ -0.71
TPM1-213ENST00000558400 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 BCAR3O75815 825 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 GNAI3P08754 354 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 UBTFL1P0CB47 393 aaPredicted RBP10.63□□□□□ -0.71
TPM1-213ENST00000558400 EPHX2P34913 555 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 KCNJ4P48050 445 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 EPHA10Q5JZY3 1008 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 DPF2Q92785 391 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 KAZALD1Q96I82 304 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 TAF1DQ9H5J8 278 aaPredicted RBP10.63□□□□□ -0.71
TPM1-213ENST00000558400 BICC1Q9H694 974 aaKnown RBP10.63□□□□□ -0.71
TPM1-213ENST00000558400 CNNM1Q9NRU3 951 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 CACNA1SQ13698 1873 aa10.63□□□□□ -0.71
TPM1-213ENST00000558400 ECE2O60344 883 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 MS4A1P11836 297 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
TPM1-213ENST00000558400 RGS19P49795 217 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 CHRNDQ07001 517 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
TPM1-213ENST00000558400 SLC51AQ86UW1 340 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 LDHDQ86WU2 507 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 COA1Q9GZY4 146 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 DBNDD1Q9H9R9 158 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 LAMB2P55268 1798 aa10.62□□□□□ -0.71
TPM1-213ENST00000558400 ZNF804BA4D1E1 1349 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 YDJCA8MPS7 323 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 H7C1D1 291 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms