RNA–Protein interactions for RNA: ENST00000557822.5

RORA-206, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-206ENST00000557822 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
RORA-206ENST00000557822 HCLS1P14317 486 aaPredicted RBP20.27■□□□□ 0.84
RORA-206ENST00000557822 EN2P19622 333 aaPredicted RBP20.27■□□□□ 0.84
RORA-206ENST00000557822 MOB2Q70IA6 237 aa20.27■□□□□ 0.84
RORA-206ENST00000557822 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
RORA-206ENST00000557822 ARMC5Q96C12 935 aa20.27■□□□□ 0.84
RORA-206ENST00000557822 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
RORA-206ENST00000557822 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
RORA-206ENST00000557822 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
RORA-206ENST00000557822 PER1O15534 1290 aaPredicted RBP20.26■□□□□ 0.83
RORA-206ENST00000557822 CC2D1BQ5T0F9 858 aaKnown RBP20.26■□□□□ 0.83
RORA-206ENST00000557822 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
RORA-206ENST00000557822 POLLQ9UGP5 575 aa20.26■□□□□ 0.83
RORA-206ENST00000557822 DDX60Q8IY21 1712 aaKnown RBP20.25■□□□□ 0.83
RORA-206ENST00000557822 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
RORA-206ENST00000557822 AGBL3Q8NEM8 1001 aa20.25■□□□□ 0.83
RORA-206ENST00000557822 OTUD5Q96G74 571 aa20.25■□□□□ 0.83
RORA-206ENST00000557822 LAMB2P55268 1798 aa20.25■□□□□ 0.83
RORA-206ENST00000557822 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
RORA-206ENST00000557822 PTPN22Q9Y2R2 807 aa20.24■□□□□ 0.83
RORA-206ENST00000557822 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
RORA-206ENST00000557822 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
RORA-206ENST00000557822 INHBEP58166 350 aa20.22■□□□□ 0.83
RORA-206ENST00000557822 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
RORA-206ENST00000557822 TTLL12Q14166 644 aaPredicted RBP20.22■□□□□ 0.83
RORA-206ENST00000557822 RSBN1LQ6PCB5 846 aaPredicted RBP20.22■□□□□ 0.83
RORA-206ENST00000557822 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
RORA-206ENST00000557822 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
RORA-206ENST00000557822 MYOZ2Q9NPC6 264 aa20.22■□□□□ 0.83
RORA-206ENST00000557822 GPSM2P81274 684 aa20.21■□□□□ 0.83
RORA-206ENST00000557822 MKRN3Q13064 507 aaKnown RBP20.21■□□□□ 0.83
RORA-206ENST00000557822 ERO1AQ96HE7 468 aa20.21■□□□□ 0.83
RORA-206ENST00000557822 TMEM106CQ9BVX2 250 aa20.21■□□□□ 0.83
RORA-206ENST00000557822 ZC3H12CQ9C0D7 883 aaKnown RBP20.21■□□□□ 0.83
RORA-206ENST00000557822 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
RORA-206ENST00000557822 NF2P35240 595 aa20.2■□□□□ 0.82
RORA-206ENST00000557822 TBC1D16Q8TBP0 767 aa20.2■□□□□ 0.82
RORA-206ENST00000557822 NUDCQ9Y266 331 aa20.2■□□□□ 0.82
RORA-206ENST00000557822 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
RORA-206ENST00000557822 H0YGN5 161 aa20.19■□□□□ 0.82
RORA-206ENST00000557822 USP17L8P0C7I0 530 aa20.19■□□□□ 0.82
RORA-206ENST00000557822 SPRYD7Q5W111 196 aa20.19■□□□□ 0.82
RORA-206ENST00000557822 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
RORA-206ENST00000557822 GMLQ99445 158 aa20.19■□□□□ 0.82
RORA-206ENST00000557822 SCN9AQ15858 1988 aa20.18■□□□□ 0.82
RORA-206ENST00000557822 MANSC4A6NHS7 340 aaPredicted RBP20.18■□□□□ 0.82
RORA-206ENST00000557822 CELF1Q92879 486 aaKnown RBP20.18■□□□□ 0.82
RORA-206ENST00000557822 TAF1P21675 1872 aa20.18■□□□□ 0.82
RORA-206ENST00000557822 PTPN12Q05209 780 aaKnown RBP20.17■□□□□ 0.82
RORA-206ENST00000557822 SF3B3Q15393 1217 aaKnown RBP20.17■□□□□ 0.82
RORA-206ENST00000557822 PRAMEF18Q5VWM3 479 aa20.17■□□□□ 0.82
RORA-206ENST00000557822 ARMC9Q7Z3E5 817 aa20.17■□□□□ 0.82
RORA-206ENST00000557822 IFNL1Q8IU54 200 aa20.17■□□□□ 0.82
RORA-206ENST00000557822 PODXL2Q9NZ53 605 aa20.17■□□□□ 0.82
RORA-206ENST00000557822 LAMA3Q16787 3333 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 G3V3G9 751 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 PDIA6Q15084 440 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 LDLRAD1Q5T700 205 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 ZNF333Q96JL9 665 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 EFCC1Q9HA90 598 aa20.16■□□□□ 0.82
RORA-206ENST00000557822 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
RORA-206ENST00000557822 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
RORA-206ENST00000557822 CHRDL2Q6WN34 429 aa20.15■□□□□ 0.82
RORA-206ENST00000557822 THUMPD2Q9BTF0 503 aaKnown RBP20.15■□□□□ 0.82
RORA-206ENST00000557822 SCAF8Q9UPN6 1271 aaKnown RBP20.14■□□□□ 0.81
RORA-206ENST00000557822 MNX1P50219 401 aaPredicted RBP20.13■□□□□ 0.81
RORA-206ENST00000557822 NBPF11Q86T75 865 aa20.13■□□□□ 0.81
RORA-206ENST00000557822 CD99L2Q8TCZ2 262 aa20.13■□□□□ 0.81
RORA-206ENST00000557822 ZBTB48P10074 688 aaPredicted RBP20.12■□□□□ 0.81
RORA-206ENST00000557822 RPS8P62241 208 aaKnown RBP20.12■□□□□ 0.81
RORA-206ENST00000557822 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
RORA-206ENST00000557822 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
RORA-206ENST00000557822 UNC80Q8N2C7 3258 aa20.12■□□□□ 0.81
RORA-206ENST00000557822 IGF2BP3O00425 579 aaKnown RBP eCLIP20.11■□□□□ 0.81
RORA-206ENST00000557822 UFL1O94874 794 aa20.11■□□□□ 0.81
RORA-206ENST00000557822 USP17L3A6NCW0 530 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 USP17L4A6NCW7 530 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 MMP14P50281 582 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 SP3Q02447 781 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 PROSER3Q2NL68 480 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 OTUD7BQ6GQQ9 843 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 USP17L1Q7RTZ2 530 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 PODNQ7Z5L7 613 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 GGA1Q9UJY5 639 aa20.1■□□□□ 0.81
RORA-206ENST00000557822 PSME4Q14997 1843 aa20.09■□□□□ 0.81
RORA-206ENST00000557822 WNT10BO00744 389 aa20.09■□□□□ 0.81
RORA-206ENST00000557822 ARHGEF6Q15052 776 aa20.09■□□□□ 0.81
RORA-206ENST00000557822 SLC4A8Q2Y0W8 1093 aa20.09■□□□□ 0.81
RORA-206ENST00000557822 SLC10A4Q96EP9 437 aa20.09■□□□□ 0.81
RORA-206ENST00000557822 UNCXA6NJT0 531 aa20.08■□□□□ 0.81
RORA-206ENST00000557822 CRHR2Q13324 411 aa20.08■□□□□ 0.81
RORA-206ENST00000557822 SLC9C1Q4G0N8 1177 aa20.08■□□□□ 0.81
RORA-206ENST00000557822 OGFOD1Q8N543 542 aa20.08■□□□□ 0.81
RORA-206ENST00000557822 ANKIB1Q9P2G1 1089 aa20.08■□□□□ 0.81
RORA-206ENST00000557822 ANGEL1Q9UNK9 670 aaKnown RBP20.08■□□□□ 0.81
RORA-206ENST00000557822 ANXA1P04083 346 aa20.07■□□□□ 0.8
RORA-206ENST00000557822 EIF2S2P20042 333 aaKnown RBP20.07■□□□□ 0.8
RORA-206ENST00000557822 MAP3K11Q16584 847 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms