RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 PSMD1Q99460 953 aa14.66□□□□□ -0.06
LINC00648-204ENST00000557749 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
LINC00648-204ENST00000557749 VEGFAP15692 232 aaPredicted RBP14.65□□□□□ -0.06
LINC00648-204ENST00000557749 FSTL1Q12841 308 aa14.65□□□□□ -0.06
LINC00648-204ENST00000557749 VPS33BQ9H267 617 aa14.65□□□□□ -0.06
LINC00648-204ENST00000557749 MYH16Q9H6N6 1097 aa14.65□□□□□ -0.06
LINC00648-204ENST00000557749 PPEF1O14829 653 aaPredicted RBP14.64□□□□□ -0.07
LINC00648-204ENST00000557749 BBOX1O75936 387 aa14.64□□□□□ -0.07
LINC00648-204ENST00000557749 DOK7Q18PE1 504 aa14.64□□□□□ -0.07
LINC00648-204ENST00000557749 DDX46Q7L014 1031 aaKnown RBP14.64□□□□□ -0.07
LINC00648-204ENST00000557749 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
LINC00648-204ENST00000557749 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
LINC00648-204ENST00000557749 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.07
LINC00648-204ENST00000557749 ISCA1Q9BUE6 129 aa14.64□□□□□ -0.07
LINC00648-204ENST00000557749 NMRK2Q9NPI5 230 aa14.64□□□□□ -0.07
LINC00648-204ENST00000557749 IQCA1LA6NCM1 817 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 ELL2O00472 640 aaPredicted RBP14.63□□□□□ -0.07
LINC00648-204ENST00000557749 HSPA6P17066 643 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 NEXNQ0ZGT2 675 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 TWISTNBQ3B726 338 aaPredicted RBP14.63□□□□□ -0.07
LINC00648-204ENST00000557749 C8orf58Q8NAV2 365 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 CCDC191Q8NCU4 936 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 PCDHGA4Q9Y5G9 962 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
LINC00648-204ENST00000557749 SNPHO15079 494 aa14.62□□□□□ -0.07
LINC00648-204ENST00000557749 ST18O60284 1047 aa14.62□□□□□ -0.07
LINC00648-204ENST00000557749 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
LINC00648-204ENST00000557749 FAM9BQ8IZU0 186 aa14.62□□□□□ -0.07
LINC00648-204ENST00000557749 SMC1BQ8NDV3 1235 aa14.62□□□□□ -0.07
LINC00648-204ENST00000557749 ARIH1Q9Y4X5 557 aaPredicted RBP14.62□□□□□ -0.07
LINC00648-204ENST00000557749 APLP1P51693 650 aa14.61□□□□□ -0.07
LINC00648-204ENST00000557749 ZBTB38Q8NAP3 1195 aaPredicted RBP14.61□□□□□ -0.07
LINC00648-204ENST00000557749 TSR2Q969E8 191 aaKnown RBP14.61□□□□□ -0.07
LINC00648-204ENST00000557749 RRAGCQ9HB90 399 aa14.61□□□□□ -0.07
LINC00648-204ENST00000557749 ATP6V0A2Q9Y487 856 aa14.61□□□□□ -0.07
LINC00648-204ENST00000557749 WDR90Q96KV7 1748 aa14.61□□□□□ -0.07
LINC00648-204ENST00000557749 CACNA1FO60840 1977 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 GRAPQ13588 217 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 ARSIQ5FYB1 569 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 SYNE4Q8N205 404 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
LINC00648-204ENST00000557749 METTL22Q9BUU2 404 aaPredicted RBP14.6□□□□□ -0.07
LINC00648-204ENST00000557749 CWC25Q9NXE8 425 aaPredicted RBP14.6□□□□□ -0.07
LINC00648-204ENST00000557749 ABCC4O15439 1325 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 FANCIQ9NVI1 1328 aa14.6□□□□□ -0.07
LINC00648-204ENST00000557749 DPYSL4O14531 572 aa14.59□□□□□ -0.07
LINC00648-204ENST00000557749 PRELPP51888 382 aa14.59□□□□□ -0.07
LINC00648-204ENST00000557749 SF3B3Q15393 1217 aaKnown RBP14.59□□□□□ -0.07
LINC00648-204ENST00000557749 SP8Q8IXZ3 490 aa14.59□□□□□ -0.07
LINC00648-204ENST00000557749 ZNF277Q9NRM2 450 aaPredicted RBP14.59□□□□□ -0.07
LINC00648-204ENST00000557749 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.08
LINC00648-204ENST00000557749 IRS4O14654 1257 aaPredicted RBP14.58□□□□□ -0.08
LINC00648-204ENST00000557749 PCCAP05165 728 aaPredicted RBP14.58□□□□□ -0.08
LINC00648-204ENST00000557749 HCLS1P14317 486 aaPredicted RBP14.58□□□□□ -0.08
LINC00648-204ENST00000557749 EIF6P56537 245 aaKnown RBP14.58□□□□□ -0.08
LINC00648-204ENST00000557749 MYD88Q99836 296 aa14.58□□□□□ -0.08
LINC00648-204ENST00000557749 PHAXQ9H814 394 aaKnown RBP14.58□□□□□ -0.08
LINC00648-204ENST00000557749 SNED1Q8TER0 1413 aa14.58□□□□□ -0.08
LINC00648-204ENST00000557749 LAMB2P55268 1798 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 CCDC152Q4G0S7 254 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 DPP8Q6V1X1 898 aaPredicted RBP14.57□□□□□ -0.08
LINC00648-204ENST00000557749 NIM1KQ8IY84 436 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 GPC2Q8N158 579 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 LARGE2Q8N3Y3 721 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 TSPYL6Q8N831 410 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 FAM89AQ96GI7 184 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
LINC00648-204ENST00000557749 ZSWIM6Q9HCJ5 1215 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 MAP3K2Q9Y2U5 619 aa14.57□□□□□ -0.08
LINC00648-204ENST00000557749 PI4KAP2A4QPH2 592 aa14.56□□□□□ -0.08
LINC00648-204ENST00000557749 CCER2I3L3R5 266 aa14.56□□□□□ -0.08
LINC00648-204ENST00000557749 FZD9O00144 591 aa14.56□□□□□ -0.08
LINC00648-204ENST00000557749 HOXB1P14653 301 aaPredicted RBP14.56□□□□□ -0.08
LINC00648-204ENST00000557749 MPNDQ8N594 471 aa14.56□□□□□ -0.08
LINC00648-204ENST00000557749 PI4KAP1Q8N8J0 262 aa14.56□□□□□ -0.08
LINC00648-204ENST00000557749 RTFDC1Q9BY42 306 aaPredicted RBP14.56□□□□□ -0.08
LINC00648-204ENST00000557749 SCN4AP35499 1836 aa14.56□□□□□ -0.08
LINC00648-204ENST00000557749 PDE8AO60658 829 aa14.55□□□□□ -0.08
LINC00648-204ENST00000557749 FLIIQ13045 1269 aa14.55□□□□□ -0.08
LINC00648-204ENST00000557749 PNMA8AQ86V59 439 aaPredicted RBP14.55□□□□□ -0.08
LINC00648-204ENST00000557749 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
LINC00648-204ENST00000557749 CDHR2Q9BYE9 1310 aa14.55□□□□□ -0.08
LINC00648-204ENST00000557749 PPIP5K2O43314 1243 aa14.54□□□□□ -0.08
LINC00648-204ENST00000557749 LMOD1P29536 600 aaPredicted RBP14.54□□□□□ -0.08
LINC00648-204ENST00000557749 FKBP5Q13451 457 aaPredicted RBP14.54□□□□□ -0.08
LINC00648-204ENST00000557749 ZNF428Q96B54 188 aa14.54□□□□□ -0.08
LINC00648-204ENST00000557749 HACL1Q9UJ83 578 aa14.54□□□□□ -0.08
LINC00648-204ENST00000557749 DDX60Q8IY21 1712 aaKnown RBP14.54□□□□□ -0.08
LINC00648-204ENST00000557749 E9PSI1 815 aa14.53□□□□□ -0.08
LINC00648-204ENST00000557749 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
LINC00648-204ENST00000557749 VAMP4O75379 141 aa14.53□□□□□ -0.08
LINC00648-204ENST00000557749 DDNO94850 711 aaPredicted RBP14.53□□□□□ -0.08
LINC00648-204ENST00000557749 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
LINC00648-204ENST00000557749 OLFM4Q6UX06 510 aa14.53□□□□□ -0.08
LINC00648-204ENST00000557749 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
LINC00648-204ENST00000557749 CDC5LQ99459 802 aaKnown RBP14.53□□□□□ -0.08
LINC00648-204ENST00000557749 EYA3Q99504 573 aa14.53□□□□□ -0.08
LINC00648-204ENST00000557749 RPS8P62241 208 aaKnown RBP14.52□□□□□ -0.09
LINC00648-204ENST00000557749 KIAA2012Q0VF49 1180 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms