RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
RD3L-201ENST00000557640 COL4A5P29400 1685 aa10.86□□□□□ -0.67
RD3L-201ENST00000557640 RNMTO43148 476 aaKnown RBP10.86□□□□□ -0.67
RD3L-201ENST00000557640 CD2BP2O95400 341 aaKnown RBP10.86□□□□□ -0.67
RD3L-201ENST00000557640 AVPP01185 164 aa10.86□□□□□ -0.67
RD3L-201ENST00000557640 SLC10A3P09131 477 aa10.86□□□□□ -0.67
RD3L-201ENST00000557640 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
RD3L-201ENST00000557640 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
RD3L-201ENST00000557640 C2CD5Q86YS7 1000 aa10.86□□□□□ -0.67
RD3L-201ENST00000557640 SPSB2Q99619 263 aa10.86□□□□□ -0.67
RD3L-201ENST00000557640 LAMB4A4D0S4 1761 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
RD3L-201ENST00000557640 PTGDRQ13258 359 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 AKAP4Q5JQC9 854 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 BICDL1Q6ZP65 573 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 TTLL6Q8N841 843 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
RD3L-201ENST00000557640 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
RD3L-201ENST00000557640 FOXN1O15353 648 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 HMOX1P09601 288 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 RPIAP49247 311 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
RD3L-201ENST00000557640 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 PUS10Q3MIT2 529 aaKnown RBP10.84□□□□□ -0.67
RD3L-201ENST00000557640 PRR5LQ6MZQ0 368 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 PCGF6Q9BYE7 350 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 SNED1Q8TER0 1413 aa10.84□□□□□ -0.67
RD3L-201ENST00000557640 CNTNAP1P78357 1384 aa10.83□□□□□ -0.68
RD3L-201ENST00000557640 C21orf2O43822 256 aa10.83□□□□□ -0.68
RD3L-201ENST00000557640 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
RD3L-201ENST00000557640 EIF5P55010 431 aaKnown RBP10.83□□□□□ -0.68
RD3L-201ENST00000557640 MTHFSDQ2M296 383 aaKnown RBP10.83□□□□□ -0.68
RD3L-201ENST00000557640 MORC1Q86VD1 984 aa10.83□□□□□ -0.68
RD3L-201ENST00000557640 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
RD3L-201ENST00000557640 WIPF1O43516 503 aa10.82□□□□□ -0.68
RD3L-201ENST00000557640 DDNO94850 711 aaPredicted RBP10.82□□□□□ -0.68
RD3L-201ENST00000557640 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
RD3L-201ENST00000557640 SLC51AQ86UW1 340 aa10.82□□□□□ -0.68
RD3L-201ENST00000557640 PASKQ96RG2 1323 aa10.82□□□□□ -0.68
RD3L-201ENST00000557640 ZNF541Q9H0D2 1346 aa10.82□□□□□ -0.68
RD3L-201ENST00000557640 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
RD3L-201ENST00000557640 HEG1Q9ULI3 1381 aa10.81□□□□□ -0.68
RD3L-201ENST00000557640 MLLT3P42568 568 aaPredicted RBP10.81□□□□□ -0.68
RD3L-201ENST00000557640 OLFM4Q6UX06 510 aa10.81□□□□□ -0.68
RD3L-201ENST00000557640 ZNF496Q96IT1 587 aaPredicted RBP10.81□□□□□ -0.68
RD3L-201ENST00000557640 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
RD3L-201ENST00000557640 NUP98P52948 1817 aa10.8□□□□□ -0.68
RD3L-201ENST00000557640 H0YIN7 160 aa10.8□□□□□ -0.68
RD3L-201ENST00000557640 CAMTA2O94983 1202 aa10.8□□□□□ -0.68
RD3L-201ENST00000557640 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
RD3L-201ENST00000557640 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
RD3L-201ENST00000557640 ZNF622Q969S3 477 aaKnown RBP eCLIP10.8□□□□□ -0.68
RD3L-201ENST00000557640 TBC1D2BQ9UPU7 963 aa10.8□□□□□ -0.68
RD3L-201ENST00000557640 DLG5Q8TDM6 1919 aa10.8□□□□□ -0.68
RD3L-201ENST00000557640 TTC24A2A3L6 582 aaPredicted RBP10.79□□□□□ -0.68
RD3L-201ENST00000557640 KCNQ3O43525 872 aa10.79□□□□□ -0.68
RD3L-201ENST00000557640 PRPF40BQ6NWY9 871 aaKnown RBP10.79□□□□□ -0.68
RD3L-201ENST00000557640 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
RD3L-201ENST00000557640 TAOK3Q9H2K8 898 aa10.79□□□□□ -0.68
RD3L-201ENST00000557640 FCF1Q9Y324 198 aaKnown RBP10.79□□□□□ -0.68
RD3L-201ENST00000557640 KDM3BQ7LBC6 1761 aa10.79□□□□□ -0.68
RD3L-201ENST00000557640 LAMB2P55268 1798 aa10.78□□□□□ -0.68
RD3L-201ENST00000557640 PRAMEF22A3QJZ6 481 aa10.78□□□□□ -0.68
RD3L-201ENST00000557640 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
RD3L-201ENST00000557640 IL17REQ8NFR9 667 aa10.78□□□□□ -0.68
RD3L-201ENST00000557640 C7orf43Q8WVR3 580 aa10.78□□□□□ -0.68
RD3L-201ENST00000557640 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
RD3L-201ENST00000557640 BRIP1Q9BX63 1249 aa10.78□□□□□ -0.68
RD3L-201ENST00000557640 ZNF330Q9Y3S2 320 aaPredicted RBP10.78□□□□□ -0.68
RD3L-201ENST00000557640 CEMIPQ8WUJ3 1361 aa10.77□□□□□ -0.68
RD3L-201ENST00000557640 TNRC18O15417 2968 aaPredicted RBP10.77□□□□□ -0.69
RD3L-201ENST00000557640 A1BGP04217 495 aa10.77□□□□□ -0.69
RD3L-201ENST00000557640 SRGNP10124 158 aa10.77□□□□□ -0.69
RD3L-201ENST00000557640 VEGFBP49765 207 aa10.77□□□□□ -0.69
RD3L-201ENST00000557640 TAF1DQ9H5J8 278 aaPredicted RBP10.77□□□□□ -0.69
RD3L-201ENST00000557640 ABCC12Q96J65 1359 aa10.77□□□□□ -0.69
RD3L-201ENST00000557640 EIF4G2P78344 907 aaKnown RBP eCLIP10.76□□□□□ -0.69
RD3L-201ENST00000557640 ZNF790Q6PG37 636 aa10.76□□□□□ -0.69
RD3L-201ENST00000557640 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
RD3L-201ENST00000557640 KIF7Q2M1P5 1343 aa10.76□□□□□ -0.69
RD3L-201ENST00000557640 PDE6BP35913 854 aa10.75□□□□□ -0.69
RD3L-201ENST00000557640 FMR1Q06787 632 aaKnown RBP eCLIP10.75□□□□□ -0.69
RD3L-201ENST00000557640 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
RD3L-201ENST00000557640 ZNF277Q9NRM2 450 aaPredicted RBP10.75□□□□□ -0.69
RD3L-201ENST00000557640 ZBTB24O43167 697 aaPredicted RBP10.74□□□□□ -0.69
RD3L-201ENST00000557640 HSPA8P11142 646 aaKnown RBP10.74□□□□□ -0.69
RD3L-201ENST00000557640 IL6STP40189 918 aaPredicted RBP10.74□□□□□ -0.69
RD3L-201ENST00000557640 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
RD3L-201ENST00000557640 LDHDQ86WU2 507 aa10.74□□□□□ -0.69
RD3L-201ENST00000557640 PRDM10Q9NQV6 1147 aa10.74□□□□□ -0.69
RD3L-201ENST00000557640 KNSTRNQ9Y448 316 aa10.74□□□□□ -0.69
RD3L-201ENST00000557640 RNF123Q5XPI4 1314 aa10.74□□□□□ -0.69
RD3L-201ENST00000557640 ANKRD36CQ5JPF3 1778 aa10.73□□□□□ -0.69
RD3L-201ENST00000557640 A0A087WZG4 1122 aa10.73□□□□□ -0.69
RD3L-201ENST00000557640 TERTO14746 1132 aaKnown RBP10.73□□□□□ -0.69
RD3L-201ENST00000557640 STARD3NLO95772 234 aa10.73□□□□□ -0.69
RD3L-201ENST00000557640 SNRPBP14678 240 aaKnown RBP10.73□□□□□ -0.69
RD3L-201ENST00000557640 LBX1P52954 281 aa10.73□□□□□ -0.69
RD3L-201ENST00000557640 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms