RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 TTC28Q96AY4 2481 aa17.85■□□□□ 0.45
TMEM260-215ENST00000557626 UBN2Q6ZU65 1347 aa17.84■□□□□ 0.45
TMEM260-215ENST00000557626 GPTP24298 496 aa17.84■□□□□ 0.45
TMEM260-215ENST00000557626 NF2P35240 595 aa17.84■□□□□ 0.45
TMEM260-215ENST00000557626 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
TMEM260-215ENST00000557626 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
TMEM260-215ENST00000557626 PRAMEF18Q5VWM3 479 aa17.84■□□□□ 0.45
TMEM260-215ENST00000557626 MTMR10Q9NXD2 777 aa17.84■□□□□ 0.45
TMEM260-215ENST00000557626 SCAF8Q9UPN6 1271 aaKnown RBP17.84■□□□□ 0.45
TMEM260-215ENST00000557626 CAP1Q01518 475 aa17.83■□□□□ 0.44
TMEM260-215ENST00000557626 SUSD4Q5VX71 490 aa17.83■□□□□ 0.44
TMEM260-215ENST00000557626 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
TMEM260-215ENST00000557626 KCNQ5Q9NR82 932 aa17.83■□□□□ 0.44
TMEM260-215ENST00000557626 MUC3AQ02505 3323 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 TAF1P21675 1872 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 BTBD11A6QL63 1104 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 IGF2BP3O00425 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM260-215ENST00000557626 ECE2O60344 883 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
TMEM260-215ENST00000557626 PLA2G5P39877 138 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 CRHR2Q13324 411 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 SHISA4Q96DD7 197 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 PRUNE2Q8WUY3 3088 aa17.82■□□□□ 0.44
TMEM260-215ENST00000557626 NTSR2O95665 410 aa17.81■□□□□ 0.44
TMEM260-215ENST00000557626 ARHGEF6Q15052 776 aa17.81■□□□□ 0.44
TMEM260-215ENST00000557626 ARMC9Q7Z3E5 817 aa17.81■□□□□ 0.44
TMEM260-215ENST00000557626 GNAT3A8MTJ3 354 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 RIMBP2O15034 1052 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 ZNF280AP59817 542 aaPredicted RBP17.8■□□□□ 0.44
TMEM260-215ENST00000557626 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 STAP2Q9UGK3 403 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 LAMB1P07942 1786 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 SCN9AQ15858 1988 aa17.8■□□□□ 0.44
TMEM260-215ENST00000557626 LAMB2P55268 1798 aa17.79■□□□□ 0.44
TMEM260-215ENST00000557626 LRRC37AA6NMS7 1700 aa17.79■□□□□ 0.44
TMEM260-215ENST00000557626 VIL1P09327 827 aaKnown RBP17.79■□□□□ 0.44
TMEM260-215ENST00000557626 FAM122AQ96E09 287 aa17.79■□□□□ 0.44
TMEM260-215ENST00000557626 RAPGEFL1Q9UHV5 662 aa17.79■□□□□ 0.44
TMEM260-215ENST00000557626 ZNF646O15015 1829 aaPredicted RBP17.79■□□□□ 0.44
TMEM260-215ENST00000557626 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
TMEM260-215ENST00000557626 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
TMEM260-215ENST00000557626 PRKG1Q13976 671 aa17.78■□□□□ 0.44
TMEM260-215ENST00000557626 DOK7Q18PE1 504 aa17.78■□□□□ 0.44
TMEM260-215ENST00000557626 OTUD7BQ6GQQ9 843 aa17.78■□□□□ 0.44
TMEM260-215ENST00000557626 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
TMEM260-215ENST00000557626 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
TMEM260-215ENST00000557626 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
TMEM260-215ENST00000557626 MYOZ2Q9NPC6 264 aa17.77■□□□□ 0.44
TMEM260-215ENST00000557626 ZBTB48P10074 688 aaPredicted RBP17.76■□□□□ 0.43
TMEM260-215ENST00000557626 GRAPQ13588 217 aa17.76■□□□□ 0.43
TMEM260-215ENST00000557626 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
TMEM260-215ENST00000557626 UBE2Q1Q7Z7E8 422 aa17.76■□□□□ 0.43
TMEM260-215ENST00000557626 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
TMEM260-215ENST00000557626 NKX2-3Q8TAU0 364 aa17.76■□□□□ 0.43
TMEM260-215ENST00000557626 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
TMEM260-215ENST00000557626 NECTIN2Q92692 538 aa17.76■□□□□ 0.43
TMEM260-215ENST00000557626 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.76■□□□□ 0.43
TMEM260-215ENST00000557626 C6orf229H3BNL8 230 aa17.75■□□□□ 0.43
TMEM260-215ENST00000557626 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
TMEM260-215ENST00000557626 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
TMEM260-215ENST00000557626 SLC10A4Q96EP9 437 aa17.75■□□□□ 0.43
TMEM260-215ENST00000557626 CEMIPQ8WUJ3 1361 aa17.75■□□□□ 0.43
TMEM260-215ENST00000557626 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
TMEM260-215ENST00000557626 EVI5O60447 810 aa17.74■□□□□ 0.43
TMEM260-215ENST00000557626 ZNF34Q8IZ26 560 aa17.74■□□□□ 0.43
TMEM260-215ENST00000557626 AGBL3Q8NEM8 1001 aa17.74■□□□□ 0.43
TMEM260-215ENST00000557626 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
TMEM260-215ENST00000557626 EYA3Q99504 573 aa17.74■□□□□ 0.43
TMEM260-215ENST00000557626 ANGEL1Q9UNK9 670 aaKnown RBP17.74■□□□□ 0.43
TMEM260-215ENST00000557626 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
TMEM260-215ENST00000557626 LAMA2P24043 3122 aaKnown RBP17.74■□□□□ 0.43
TMEM260-215ENST00000557626 SLC10A5Q5PT55 438 aa17.73■□□□□ 0.43
TMEM260-215ENST00000557626 WNK4Q96J92 1243 aa17.73■□□□□ 0.43
TMEM260-215ENST00000557626 ZBTB3Q9H5J0 574 aa17.73■□□□□ 0.43
TMEM260-215ENST00000557626 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
TMEM260-215ENST00000557626 MTFR1Q15390 333 aa17.72■□□□□ 0.43
TMEM260-215ENST00000557626 LRIT3Q3SXY7 679 aa17.72■□□□□ 0.43
TMEM260-215ENST00000557626 PARP10Q53GL7 1025 aa17.72■□□□□ 0.43
TMEM260-215ENST00000557626 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
TMEM260-215ENST00000557626 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
TMEM260-215ENST00000557626 POLLQ9UGP5 575 aa17.72■□□□□ 0.43
TMEM260-215ENST00000557626 PSME4Q14997 1843 aa17.71■□□□□ 0.43
TMEM260-215ENST00000557626 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
TMEM260-215ENST00000557626 UTP14AQ9BVJ6 771 aaKnown RBP17.71■□□□□ 0.43
TMEM260-215ENST00000557626 G3V3G9 751 aa17.7■□□□□ 0.42
TMEM260-215ENST00000557626 BMP8BP34820 402 aa17.7■□□□□ 0.42
TMEM260-215ENST00000557626 GJA8P48165 433 aa17.7■□□□□ 0.42
TMEM260-215ENST00000557626 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
TMEM260-215ENST00000557626 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
TMEM260-215ENST00000557626 FARP2O94887 1054 aaPredicted RBP17.69■□□□□ 0.42
TMEM260-215ENST00000557626 BCAMP50895 628 aa17.69■□□□□ 0.42
TMEM260-215ENST00000557626 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
TMEM260-215ENST00000557626 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
TMEM260-215ENST00000557626 GDF15Q99988 308 aa17.68■□□□□ 0.42
TMEM260-215ENST00000557626 FZD1Q9UP38 647 aa17.68■□□□□ 0.42
TMEM260-215ENST00000557626 HCLS1P14317 486 aaPredicted RBP17.67■□□□□ 0.42
TMEM260-215ENST00000557626 GIGYF2Q6Y7W6 1299 aaKnown RBP17.67■□□□□ 0.42
TMEM260-215ENST00000557626 SYMPKQ92797 1274 aaKnown RBP17.67■□□□□ 0.42
TMEM260-215ENST00000557626 CLMNQ96JQ2 1002 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms