RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 HTRA3P83110 453 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 SH3BP5LQ7L8J4 393 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
LINC00640-204ENST00000557295 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
LINC00640-204ENST00000557295 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
LINC00640-204ENST00000557295 TGFB2P61812 414 aa9.55□□□□□ -0.88
LINC00640-204ENST00000557295 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
LINC00640-204ENST00000557295 HDGFL2Q7Z4V5 671 aaPredicted RBP9.55□□□□□ -0.88
LINC00640-204ENST00000557295 C16orf71Q8IYS4 520 aaPredicted RBP9.55□□□□□ -0.88
LINC00640-204ENST00000557295 SMARCC1Q92922 1105 aaPredicted RBP9.55□□□□□ -0.88
LINC00640-204ENST00000557295 LY75O60449 1722 aa9.55□□□□□ -0.88
LINC00640-204ENST00000557295 MEGF6O75095 1541 aa9.55□□□□□ -0.88
LINC00640-204ENST00000557295 PXDNLA1KZ92 1463 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 PIK3CDO00329 1044 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 HOXC9P31274 260 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 DEPDC4Q8N2C3 294 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 USP54Q70EL1 1684 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 TUBGCP6Q96RT7 1819 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 MAP3K19Q56UN5 1328 aa9.54□□□□□ -0.88
LINC00640-204ENST00000557295 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 TRIM32Q13049 653 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 LAPTM4AQ15012 233 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 ARHGAP27Q6ZUM4 889 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 TERF2IPQ9NYB0 399 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 CDV3Q9UKY7 258 aaKnown RBP9.53□□□□□ -0.88
LINC00640-204ENST00000557295 BCS1LQ9Y276 419 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 C10orf71Q711Q0 1435 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
LINC00640-204ENST00000557295 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 MMP10P09238 476 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 SH3BP2P78314 561 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 EML3Q32P44 896 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 MAP7D1Q3KQU3 841 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 USP17L2Q6R6M4 530 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 MPRIPQ6WCQ1 1025 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 Q6ZNB5 142 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 SMIM5Q71RC9 77 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 FAM174AQ8TBP5 190 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 RAPGEF4Q8WZA2 1011 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 OCSTAMPQ9BR26 566 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 PCDH11XQ9BZA7 1347 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 PCDH11YQ9BZA8 1340 aa9.52□□□□□ -0.89
LINC00640-204ENST00000557295 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
LINC00640-204ENST00000557295 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
LINC00640-204ENST00000557295 AMPHP49418 695 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 C9orf131Q5VYM1 1079 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 PLPP7Q8NBV4 271 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 TMC1Q8TDI8 760 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 SLC12A5Q9H2X9 1139 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 DOLKQ9UPQ8 538 aa9.51□□□□□ -0.89
LINC00640-204ENST00000557295 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
LINC00640-204ENST00000557295 A0A1W2PP64 1363 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 LOC102724428A0A0B4J2F2 783 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 GFRA3O60609 400 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 HSPA1AP0DMV8 641 aaKnown RBP9.5□□□□□ -0.89
LINC00640-204ENST00000557295 HSPA1BP0DMV9 641 aaKnown RBP9.5□□□□□ -0.89
LINC00640-204ENST00000557295 TATP17735 454 aaPredicted RBP9.5□□□□□ -0.89
LINC00640-204ENST00000557295 VARSP26640 1264 aaKnown RBP9.5□□□□□ -0.89
LINC00640-204ENST00000557295 SIK1P57059 783 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 RAB15P59190 212 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 NLGN1Q8N2Q7 840 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 LINC00116Q8NCU8 138 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 PIGBQ92521 554 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 COG3Q96JB2 828 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 PUS7Q96PZ0 661 aaKnown RBP9.5□□□□□ -0.89
LINC00640-204ENST00000557295 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
LINC00640-204ENST00000557295 PCNTO95613 3336 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 DOT1LQ8TEK3 1739 aa9.5□□□□□ -0.89
LINC00640-204ENST00000557295 CYP27B1O15528 508 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 DPEP1P16444 411 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 RASA1P20936 1047 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 RPIAP49247 311 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 WNT7BP56706 349 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 NCOA4Q13772 614 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
LINC00640-204ENST00000557295 C5P01031 1676 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
LINC00640-204ENST00000557295 MON2Q7Z3U7 1717 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 WDR90Q96KV7 1748 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms