RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 MICALL2Q8IY33 904 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 TRPM4Q8TD43 1214 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
TUBB3-213ENST00000557262 PRDM10Q9NQV6 1147 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 TLL2Q9Y6L7 1015 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 IL16Q14005 1332 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 IGKV5-2P06315 115 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 RPS12P25398 132 aaKnown RBP20.41■□□□□ 0.86
TUBB3-213ENST00000557262 NEXNQ0ZGT2 675 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 CAPNS2Q96L46 248 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 KCNQ5Q9NR82 932 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 COL4A1P02462 1669 aa20.41■□□□□ 0.86
TUBB3-213ENST00000557262 G3V3G9 751 aa20.4■□□□□ 0.86
TUBB3-213ENST00000557262 CELF2O95319 508 aaKnown RBP20.4■□□□□ 0.86
TUBB3-213ENST00000557262 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
TUBB3-213ENST00000557262 DCAF8Q5TAQ9 597 aa20.4■□□□□ 0.86
TUBB3-213ENST00000557262 PAXIP1Q6ZW49 1069 aaPredicted RBP20.4■□□□□ 0.86
TUBB3-213ENST00000557262 ANKRD18AQ8IVF6 992 aa20.4■□□□□ 0.86
TUBB3-213ENST00000557262 GPR101Q96P66 508 aaPredicted RBP20.4■□□□□ 0.86
TUBB3-213ENST00000557262 CCDC85AQ96PX6 553 aaPredicted RBP20.4■□□□□ 0.86
TUBB3-213ENST00000557262 GGA1Q9UJY5 639 aa20.4■□□□□ 0.86
TUBB3-213ENST00000557262 ANP32CO43423 234 aa20.39■□□□□ 0.85
TUBB3-213ENST00000557262 UFL1O94874 794 aa20.39■□□□□ 0.85
TUBB3-213ENST00000557262 SAMD7Q7Z3H4 446 aa20.39■□□□□ 0.85
TUBB3-213ENST00000557262 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.85
TUBB3-213ENST00000557262 CYP4F22Q6NT55 531 aa20.38■□□□□ 0.85
TUBB3-213ENST00000557262 G2E3Q7L622 706 aa20.38■□□□□ 0.85
TUBB3-213ENST00000557262 SAPCD2Q86UD0 394 aa20.38■□□□□ 0.85
TUBB3-213ENST00000557262 RTL9Q8NET4 1388 aa20.37■□□□□ 0.85
TUBB3-213ENST00000557262 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
TUBB3-213ENST00000557262 VIL1P09327 827 aaKnown RBP20.37■□□□□ 0.85
TUBB3-213ENST00000557262 LBX1P52954 281 aa20.37■□□□□ 0.85
TUBB3-213ENST00000557262 CTSWP56202 376 aa20.37■□□□□ 0.85
TUBB3-213ENST00000557262 GRM1Q13255 1194 aa20.37■□□□□ 0.85
TUBB3-213ENST00000557262 CWF19L2Q2TBE0 894 aaKnown RBP20.37■□□□□ 0.85
TUBB3-213ENST00000557262 USP48Q86UV5 1035 aa20.37■□□□□ 0.85
TUBB3-213ENST00000557262 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
TUBB3-213ENST00000557262 CDC5LQ99459 802 aaKnown RBP20.37■□□□□ 0.85
TUBB3-213ENST00000557262 XDHP47989 1333 aa20.36■□□□□ 0.85
TUBB3-213ENST00000557262 NEURL1BA8MQ27 555 aa20.36■□□□□ 0.85
TUBB3-213ENST00000557262 TBC1D10BQ4KMP7 808 aaPredicted RBP20.36■□□□□ 0.85
TUBB3-213ENST00000557262 RBM26Q5T8P6 1007 aaKnown RBP20.36■□□□□ 0.85
TUBB3-213ENST00000557262 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
TUBB3-213ENST00000557262 HHIPL1Q96JK4 782 aa20.36■□□□□ 0.85
TUBB3-213ENST00000557262 H7C1W4 665 aa20.35■□□□□ 0.85
TUBB3-213ENST00000557262 ATP2B4P23634 1241 aa20.35■□□□□ 0.85
TUBB3-213ENST00000557262 MAP2K2P36507 400 aa20.35■□□□□ 0.85
TUBB3-213ENST00000557262 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
TUBB3-213ENST00000557262 BSDC1Q9NW68 430 aaPredicted RBP20.35■□□□□ 0.85
TUBB3-213ENST00000557262 DCPSQ96C86 337 aaKnown RBP20.34■□□□□ 0.85
TUBB3-213ENST00000557262 BEGAINQ9BUH8 593 aa20.34■□□□□ 0.85
TUBB3-213ENST00000557262 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
TUBB3-213ENST00000557262 VAMP4O75379 141 aa20.33■□□□□ 0.85
TUBB3-213ENST00000557262 EGFRP00533 1210 aa20.33■□□□□ 0.85
TUBB3-213ENST00000557262 HSPA8P11142 646 aaKnown RBP20.33■□□□□ 0.85
TUBB3-213ENST00000557262 FLIIQ13045 1269 aa20.33■□□□□ 0.85
TUBB3-213ENST00000557262 GREM2Q9H772 168 aa20.33■□□□□ 0.85
TUBB3-213ENST00000557262 MINPP1Q9UNW1 487 aa20.33■□□□□ 0.85
TUBB3-213ENST00000557262 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
TUBB3-213ENST00000557262 GCKRQ14397 625 aa20.32■□□□□ 0.84
TUBB3-213ENST00000557262 UBE3BQ7Z3V4 1068 aa20.32■□□□□ 0.84
TUBB3-213ENST00000557262 KRT26Q7Z3Y9 468 aa20.32■□□□□ 0.84
TUBB3-213ENST00000557262 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
TUBB3-213ENST00000557262 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
TUBB3-213ENST00000557262 AOC2O75106 756 aa20.31■□□□□ 0.84
TUBB3-213ENST00000557262 FKBP5Q13451 457 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-213ENST00000557262 KIF4BQ2VIQ3 1234 aa20.31■□□□□ 0.84
TUBB3-213ENST00000557262 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-213ENST00000557262 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
TUBB3-213ENST00000557262 PLA2G12BQ9BX93 195 aa20.31■□□□□ 0.84
TUBB3-213ENST00000557262 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
TUBB3-213ENST00000557262 DLK2Q6UY11 383 aa20.3■□□□□ 0.84
TUBB3-213ENST00000557262 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
TUBB3-213ENST00000557262 MYH16Q9H6N6 1097 aa20.3■□□□□ 0.84
TUBB3-213ENST00000557262 THSD7BQ9C0I4 1608 aa20.29■□□□□ 0.84
TUBB3-213ENST00000557262 USP17L3A6NCW0 530 aa20.29■□□□□ 0.84
TUBB3-213ENST00000557262 USP17L4A6NCW7 530 aa20.29■□□□□ 0.84
TUBB3-213ENST00000557262 WTIPA6NIX2 430 aaPredicted RBP20.29■□□□□ 0.84
TUBB3-213ENST00000557262 ZNF280AP59817 542 aaPredicted RBP20.29■□□□□ 0.84
TUBB3-213ENST00000557262 USP17L1Q7RTZ2 530 aa20.29■□□□□ 0.84
TUBB3-213ENST00000557262 CSF1RP07333 972 aa20.28■□□□□ 0.84
TUBB3-213ENST00000557262 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
TUBB3-213ENST00000557262 CCT4P50991 539 aaKnown RBP20.28■□□□□ 0.84
TUBB3-213ENST00000557262 CASP7P55210 303 aa20.28■□□□□ 0.84
TUBB3-213ENST00000557262 HUNKP57058 714 aa20.28■□□□□ 0.84
TUBB3-213ENST00000557262 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
TUBB3-213ENST00000557262 GMLQ99445 158 aa20.28■□□□□ 0.84
TUBB3-213ENST00000557262 SCN9AQ15858 1988 aa20.28■□□□□ 0.84
TUBB3-213ENST00000557262 USP17L8P0C7I0 530 aa20.27■□□□□ 0.84
TUBB3-213ENST00000557262 ITGA6P23229 1130 aa20.27■□□□□ 0.84
TUBB3-213ENST00000557262 SULF1Q8IWU6 871 aa20.27■□□□□ 0.84
TUBB3-213ENST00000557262 GBA2Q9HCG7 927 aaPredicted RBP20.27■□□□□ 0.84
TUBB3-213ENST00000557262 LEMD3Q9Y2U8 911 aa20.27■□□□□ 0.84
TUBB3-213ENST00000557262 MED23Q9ULK4 1368 aa20.26■□□□□ 0.83
TUBB3-213ENST00000557262 ADM5C9JUS6 153 aa20.26■□□□□ 0.83
TUBB3-213ENST00000557262 SCARF1Q14162 830 aa20.26■□□□□ 0.83
TUBB3-213ENST00000557262 MPHOSPH8Q99549 860 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms