RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 FMR1NBQ8N0W7 255 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-246ENST00000557030 EDEM1Q92611 657 aa7.94□□□□□ -1.14
ATXN3-246ENST00000557030 SMG9Q9H0W8 520 aaKnown RBP7.94□□□□□ -1.14
ATXN3-246ENST00000557030 ABI2Q9NYB9 513 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-246ENST00000557030 TMEM63CQ9P1W3 806 aa7.94□□□□□ -1.14
ATXN3-246ENST00000557030 RPLP1P05386 114 aaKnown RBP7.93□□□□□ -1.14
ATXN3-246ENST00000557030 SELPP16109 830 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 GRIK4Q16099 956 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 DMRTC2Q8IXT2 367 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-246ENST00000557030 DTWD1Q8N5C7 304 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 RETREG2Q8NC44 543 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 PLD4Q96BZ4 506 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 NSUN5Q96P11 429 aaKnown RBP7.93□□□□□ -1.14
ATXN3-246ENST00000557030 ELP3Q9H9T3 547 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 EGFL7Q9UHF1 273 aa7.93□□□□□ -1.14
ATXN3-246ENST00000557030 FZD6O60353 706 aa7.92□□□□□ -1.14
ATXN3-246ENST00000557030 ELNP15502 786 aa7.92□□□□□ -1.14
ATXN3-246ENST00000557030 EIF2AK2P19525 551 aaKnown RBP7.92□□□□□ -1.14
ATXN3-246ENST00000557030 CNTN3Q9P232 1028 aa7.92□□□□□ -1.14
ATXN3-246ENST00000557030 FAM13AO94988 1023 aa7.91□□□□□ -1.14
ATXN3-246ENST00000557030 CYP2E1P05181 493 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-246ENST00000557030 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
ATXN3-246ENST00000557030 SUZ12Q15022 739 aaKnown RBP7.91□□□□□ -1.14
ATXN3-246ENST00000557030 TXNDC2Q86VQ3 553 aa7.91□□□□□ -1.14
ATXN3-246ENST00000557030 POLIQ9UNA4 740 aa7.91□□□□□ -1.14
ATXN3-246ENST00000557030 MTMR7Q9Y216 660 aa7.91□□□□□ -1.14
ATXN3-246ENST00000557030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-246ENST00000557030 ZCCHC6Q5VYS8 1495 aaKnown RBP7.9□□□□□ -1.14
ATXN3-246ENST00000557030 ICMTO60725 284 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 ADAM23O75077 832 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 DEAF1O75398 565 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-246ENST00000557030 GHRHP01286 108 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 HYAL2Q12891 473 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 ADGRE1Q14246 886 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 TTC39BQ5VTQ0 682 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-246ENST00000557030 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 FBXO11Q86XK2 927 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 CEP120Q8N960 986 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 LENG1Q96BZ8 264 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-246ENST00000557030 NACC1Q96RE7 527 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 CHRDQ9H2X0 955 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 SALL4Q9UJQ4 1053 aa7.9□□□□□ -1.14
ATXN3-246ENST00000557030 A6NHS1 94 aa7.89□□□□□ -1.15
ATXN3-246ENST00000557030 TM4SF5O14894 197 aa7.89□□□□□ -1.15
ATXN3-246ENST00000557030 RAC1P63000 192 aa7.89□□□□□ -1.15
ATXN3-246ENST00000557030 ZNF211Q13398 564 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-246ENST00000557030 ZNF438Q7Z4V0 828 aa7.89□□□□□ -1.15
ATXN3-246ENST00000557030 C9orf172C9J069 976 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 NFKBIEO00221 500 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 APBA3O96018 575 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 GATA4P43694 442 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 SERPINB4P48594 390 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 ATP11AP98196 1134 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 SHISA2Q6UWI4 295 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 WFDC8Q8IUA0 241 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 GJD3Q8N144 294 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 C1orf127Q8N9H9 656 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 TRIM33Q9UPN9 1127 aa7.88□□□□□ -1.15
ATXN3-246ENST00000557030 DLL1O00548 723 aa7.87□□□□□ -1.15
ATXN3-246ENST00000557030 MBTPS1Q14703 1052 aa7.87□□□□□ -1.15
ATXN3-246ENST00000557030 RBSNQ9H1K0 784 aa7.87□□□□□ -1.15
ATXN3-246ENST00000557030 ANO2Q9NQ90 1003 aa7.87□□□□□ -1.15
ATXN3-246ENST00000557030 CCDC87Q9NVE4 849 aa7.87□□□□□ -1.15
ATXN3-246ENST00000557030 ABL1P00519 1130 aa7.86□□□□□ -1.15
ATXN3-246ENST00000557030 PCSK2P16519 638 aa7.86□□□□□ -1.15
ATXN3-246ENST00000557030 USP5P45974 858 aa7.86□□□□□ -1.15
ATXN3-246ENST00000557030 ARHGAP4P98171 946 aa7.86□□□□□ -1.15
ATXN3-246ENST00000557030 PBX4Q9BYU1 374 aa7.86□□□□□ -1.15
ATXN3-246ENST00000557030 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
ATXN3-246ENST00000557030 TNFRSF21O75509 655 aa7.85□□□□□ -1.15
ATXN3-246ENST00000557030 SETDB1Q15047 1291 aa7.85□□□□□ -1.15
ATXN3-246ENST00000557030 C8orf34Q49A92 452 aa7.85□□□□□ -1.15
ATXN3-246ENST00000557030 GDF6Q6KF10 455 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-246ENST00000557030 IL22RA1Q8N6P7 574 aa7.85□□□□□ -1.15
ATXN3-246ENST00000557030 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-246ENST00000557030 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
ATXN3-246ENST00000557030 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 FURINP09958 794 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 ITGB7P26010 798 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 NRG1Q02297 640 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-246ENST00000557030 EHHADHQ08426 723 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 PDE4CQ08493 712 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 NKAPLQ5M9Q1 402 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 IGF2-ASQ6U949 168 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 PMEPA1Q969W9 287 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 SPACA7Q96KW9 195 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 ADAM19Q9H013 955 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 TPSG1Q9NRR2 321 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 DZANK1Q9NVP4 752 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 KANSL3Q9P2N6 904 aa7.84□□□□□ -1.15
ATXN3-246ENST00000557030 IGHA2P01877 340 aa7.83□□□□□ -1.16
ATXN3-246ENST00000557030 DOC2BQ14184 412 aa7.83□□□□□ -1.16
ATXN3-246ENST00000557030 RSPO4Q2I0M5 234 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-246ENST00000557030 CEP135Q66GS9 1140 aa7.83□□□□□ -1.16
ATXN3-246ENST00000557030 POP1Q99575 1024 aaKnown RBP7.83□□□□□ -1.16
ATXN3-246ENST00000557030 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms