RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
SRP54-213ENST00000556994 GOLPH3LQ9H4A5 285 aa13.41□□□□□ -0.26
SRP54-213ENST00000556994 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
SRP54-213ENST00000556994 SMTNL1A8MU46 457 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
SRP54-213ENST00000556994 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 NEXNQ0ZGT2 675 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 KRT32Q14532 448 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 TNNI3KQ59H18 835 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 DBNDD2Q9BQY9 259 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 FPGT-TNNI3KV9GXZ4 949 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 SLIT1O75093 1534 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 NFAT5O94916 1531 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 ZNF609O15014 1411 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 ADGRL3Q9HAR2 1447 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 JCADQ9P266 1359 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 GCP02774 474 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 ADD1P35611 737 aaKnown RBP13.4□□□□□ -0.26
SRP54-213ENST00000556994 APOBRQ0VD83 1088 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
SRP54-213ENST00000556994 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 KCNH5Q8NCM2 988 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
SRP54-213ENST00000556994 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 ATP5JP18859 108 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 PTPN12Q05209 780 aaKnown RBP13.39□□□□□ -0.27
SRP54-213ENST00000556994 FILIP1Q7Z7B0 1213 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
SRP54-213ENST00000556994 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
SRP54-213ENST00000556994 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 CHST3Q7LGC8 479 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
SRP54-213ENST00000556994 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
SRP54-213ENST00000556994 BECN2A8MW95 431 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 ATP5J2-PTCD1G3V325 749 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
SRP54-213ENST00000556994 MCMDC2Q4G0Z9 681 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRP54-213ENST00000556994 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
SRP54-213ENST00000556994 RFX5P48382 616 aaPredicted RBP13.38□□□□□ -0.27
SRP54-213ENST00000556994 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
SRP54-213ENST00000556994 ZNF790Q6PG37 636 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 NFATC2IPQ8NCF5 419 aa13.38□□□□□ -0.27
SRP54-213ENST00000556994 NSUN7Q8NE18 718 aaKnown RBP13.38□□□□□ -0.27
SRP54-213ENST00000556994 U3KPZ7 1027 aaPredicted RBP13.38□□□□□ -0.27
SRP54-213ENST00000556994 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 PTPDC1A2A3K4 754 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 SKILP12757 684 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 METTL22Q9BUU2 404 aaPredicted RBP13.37□□□□□ -0.27
SRP54-213ENST00000556994 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
SRP54-213ENST00000556994 ME1P48163 572 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 STX1AQ16623 288 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 ANKRD13DQ6ZTN6 518 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
SRP54-213ENST00000556994 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 PFKFB2O60825 505 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 CDC25BP30305 580 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
SRP54-213ENST00000556994 GTPBP4Q9BZE4 634 aaKnown RBP13.36□□□□□ -0.27
SRP54-213ENST00000556994 GOLIM4O00461 696 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
SRP54-213ENST00000556994 SARM1Q6SZW1 724 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 DHX32Q7L7V1 743 aaKnown RBP13.35□□□□□ -0.27
SRP54-213ENST00000556994 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 HAUS7Q99871 368 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 CCDC69A6NI79 296 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
SRP54-213ENST00000556994 NCAPD2Q15021 1401 aa13.35□□□□□ -0.27
SRP54-213ENST00000556994 A0A087WZG4 1122 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 CAVIN2O95810 425 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 PTPN14Q15678 1187 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
SRP54-213ENST00000556994 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
SRP54-213ENST00000556994 OGFRQ9NZT2 677 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 TIMM10P62072 90 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
SRP54-213ENST00000556994 NAA16Q6N069 864 aaPredicted RBP13.34□□□□□ -0.27
SRP54-213ENST00000556994 FEZ1Q99689 392 aa13.34□□□□□ -0.27
SRP54-213ENST00000556994 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
SRP54-213ENST00000556994 NPHP1O15259 732 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 CTAGE5O15320 804 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms