RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ZNF652Q9Y2D9 606 aa7.91□□□□□ -1.14
ATXN3-245ENST00000556958 NPC1L1Q9UHC9 1359 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 CAMTA2O94983 1202 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 FKBP1BP68106 108 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 SUPT20HQ8NEM7 779 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 RBM27Q9P2N5 1060 aaKnown RBP7.9□□□□□ -1.14
ATXN3-245ENST00000556958 POLKQ9UBT6 870 aa7.9□□□□□ -1.14
ATXN3-245ENST00000556958 NRXN2Q9P2S2 1712 aa7.89□□□□□ -1.15
ATXN3-245ENST00000556958 TM4SF4P48230 202 aa7.89□□□□□ -1.15
ATXN3-245ENST00000556958 DZIP3Q86Y13 1208 aaKnown RBP7.89□□□□□ -1.15
ATXN3-245ENST00000556958 MRPL50Q8N5N7 158 aaKnown RBP7.89□□□□□ -1.15
ATXN3-245ENST00000556958 TRPM4Q8TD43 1214 aa7.89□□□□□ -1.15
ATXN3-245ENST00000556958 COL25A1Q9BXS0 654 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-245ENST00000556958 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
ATXN3-245ENST00000556958 TRIOBPQ9H2D6 2365 aa7.89□□□□□ -1.15
ATXN3-245ENST00000556958 FER1L6Q2WGJ9 1857 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 SREBF2Q12772 1141 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 RASAL3Q86YV0 1011 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 SULF1Q8IWU6 871 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 DPF2Q92785 391 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 RPGRQ92834 1020 aaKnown RBP7.88□□□□□ -1.15
ATXN3-245ENST00000556958 ZBED2Q9BTP6 218 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 CFHR5Q9BXR6 569 aa7.88□□□□□ -1.15
ATXN3-245ENST00000556958 MYH14Q7Z406 1995 aaKnown RBP7.88□□□□□ -1.15
ATXN3-245ENST00000556958 DICER1Q9UPY3 1922 aaKnown RBP7.88□□□□□ -1.15
ATXN3-245ENST00000556958 ADAMTS7Q9UKP4 1686 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 A0A1W2PPC1 479 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 TNNT2P45379 298 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-245ENST00000556958 FOXK1P85037 733 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 AOC3Q16853 763 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 CDCA8Q53HL2 280 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 OTOP1Q7RTM1 612 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 NBPF11Q86T75 865 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 PLPP6Q8IY26 295 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 DPF3Q92784 378 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 ARMC5Q96C12 935 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 RBM17Q96I25 401 aaKnown RBP7.87□□□□□ -1.15
ATXN3-245ENST00000556958 LGR6Q9HBX8 967 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 PRDM6Q9NQX0 595 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 NIP7Q9Y221 180 aaKnown RBP eCLIP7.87□□□□□ -1.15
ATXN3-245ENST00000556958 RGPD2P0DJD1 1756 aa7.87□□□□□ -1.15
ATXN3-245ENST00000556958 RNMTO43148 476 aaKnown RBP7.86□□□□□ -1.15
ATXN3-245ENST00000556958 RAD17O75943 681 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 HOXA10P31260 410 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-245ENST00000556958 SLC4A8Q2Y0W8 1093 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 CRY2Q49AN0 593 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 DLK2Q6UY11 383 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 CRAMP1Q96RY5 1269 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 TESK2Q96S53 571 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 PTPN22Q9Y2R2 807 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 DLEC1Q9Y238 1755 aa7.86□□□□□ -1.15
ATXN3-245ENST00000556958 COL5A3P25940 1745 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-245ENST00000556958 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 ADM5C9JUS6 153 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 PPP1R37O75864 691 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 A1BGP04217 495 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 INHBEP58166 350 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 ARHGEF6Q15052 776 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 SAMD7Q7Z3H4 446 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 ERO1AQ96HE7 468 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 NYXQ9GZU5 481 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 STXBP5LQ9Y2K9 1186 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 NR2E3Q9Y5X4 410 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 CCDC88AQ3V6T2 1871 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 SLX4Q8IY92 1834 aa7.85□□□□□ -1.15
ATXN3-245ENST00000556958 KIF7Q2M1P5 1343 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 PRAMEF22A3QJZ6 481 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 TCERG1O14776 1098 aaKnown RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 TBC1D12O60347 775 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 GFRA3O60609 400 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 RPS12P25398 132 aaKnown RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 KIAA2012Q0VF49 1180 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 NEUROD1Q13562 356 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 TBC1D10BQ4KMP7 808 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 SULT6B1Q6IMI4 303 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 ZNF454Q8N9F8 522 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 CDCA5Q96FF9 252 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 ZNF496Q96IT1 587 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 RTFDC1Q9BY42 306 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-245ENST00000556958 EFCC1Q9HA90 598 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 SZT2Q5T011 3432 aa7.84□□□□□ -1.15
ATXN3-245ENST00000556958 TCIRG1Q13488 830 aa7.83□□□□□ -1.16
ATXN3-245ENST00000556958 DPP8Q6V1X1 898 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-245ENST00000556958 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATXN3-245ENST00000556958 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
ATXN3-245ENST00000556958 HTATIP2Q9BUP3 242 aa7.83□□□□□ -1.16
ATXN3-245ENST00000556958 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
ATXN3-245ENST00000556958 ATP6V0A2Q9Y487 856 aa7.83□□□□□ -1.16
ATXN3-245ENST00000556958 SNED1Q8TER0 1413 aa7.83□□□□□ -1.16
ATXN3-245ENST00000556958 MKI67P46013 3256 aaKnown RBP7.83□□□□□ -1.16
ATXN3-245ENST00000556958 PTPREP23469 700 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 AEBP1Q8IUX7 1158 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 MPNDQ8N594 471 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms