RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 POTECB2RU33 542 aa28.81■■■□□ 2.2
TDP1-216ENST00000556867 IPO8O15397 1037 aaKnown RBP28.81■■■□□ 2.2
TDP1-216ENST00000556867 IFIT5Q13325 482 aaKnown RBP28.81■■■□□ 2.2
TDP1-216ENST00000556867 WASHC4Q2M389 1173 aa28.81■■■□□ 2.2
TDP1-216ENST00000556867 EYA3Q99504 573 aa28.81■■■□□ 2.2
TDP1-216ENST00000556867 GGA1Q9UJY5 639 aa28.81■■■□□ 2.2
TDP1-216ENST00000556867 MINPP1Q9UNW1 487 aa28.81■■■□□ 2.2
TDP1-216ENST00000556867 CHMP3Q9Y3E7 222 aa28.81■■■□□ 2.2
TDP1-216ENST00000556867 TOMM70O94826 608 aa28.8■■■□□ 2.2
TDP1-216ENST00000556867 UFL1O94874 794 aa28.8■■■□□ 2.2
TDP1-216ENST00000556867 GPC2Q8N158 579 aa28.8■■■□□ 2.2
TDP1-216ENST00000556867 ZNRF3Q9ULT6 936 aa28.8■■■□□ 2.2
TDP1-216ENST00000556867 RABL6Q3YEC7 729 aaPredicted RBP28.79■■■□□ 2.2
TDP1-216ENST00000556867 MPHOSPH8Q99549 860 aa28.79■■■□□ 2.2
TDP1-216ENST00000556867 C16orf71Q8IYS4 520 aaPredicted RBP28.78■■■□□ 2.2
TDP1-216ENST00000556867 BICC1Q9H694 974 aaKnown RBP28.78■■■□□ 2.2
TDP1-216ENST00000556867 TRIM27P14373 513 aa28.77■■■□□ 2.2
TDP1-216ENST00000556867 ATP2B4P23634 1241 aa28.77■■■□□ 2.2
TDP1-216ENST00000556867 CCDC57Q2TAC2 916 aa28.77■■■□□ 2.2
TDP1-216ENST00000556867 ATF7IPQ6VMQ6 1270 aa28.77■■■□□ 2.2
TDP1-216ENST00000556867 A0A1B0GUL6 1792 aa28.76■■■□□ 2.19
TDP1-216ENST00000556867 INTS3Q68E01 1043 aaKnown RBP28.76■■■□□ 2.19
TDP1-216ENST00000556867 ANKRD44Q8N8A2 993 aa28.76■■■□□ 2.19
TDP1-216ENST00000556867 FRAT1Q92837 279 aaPredicted RBP28.76■■■□□ 2.19
TDP1-216ENST00000556867 GPR101Q96P66 508 aaPredicted RBP28.76■■■□□ 2.19
TDP1-216ENST00000556867 IQCA1LA6NCM1 817 aa28.75■■■□□ 2.19
TDP1-216ENST00000556867 RIMBP2O15034 1052 aa28.75■■■□□ 2.19
TDP1-216ENST00000556867 RBM46Q8TBY0 533 aaKnown RBP28.75■■■□□ 2.19
TDP1-216ENST00000556867 CXCL9Q07325 125 aa28.74■■■□□ 2.19
TDP1-216ENST00000556867 ZC3H12CQ9C0D7 883 aaKnown RBP28.74■■■□□ 2.19
TDP1-216ENST00000556867 ANKRD2Q9GZV1 360 aa28.74■■■□□ 2.19
TDP1-216ENST00000556867 YDJCA8MPS7 323 aa28.73■■■□□ 2.19
TDP1-216ENST00000556867 ZKSCAN2Q63HK3 967 aa28.73■■■□□ 2.19
TDP1-216ENST00000556867 GJA3Q9Y6H8 435 aa28.73■■■□□ 2.19
TDP1-216ENST00000556867 UBTFL1P0CB47 393 aaPredicted RBP28.72■■■□□ 2.19
TDP1-216ENST00000556867 TAF7LQ5H9L4 462 aa28.72■■■□□ 2.19
TDP1-216ENST00000556867 DBNDD1Q9H9R9 158 aa28.72■■■□□ 2.19
TDP1-216ENST00000556867 LEMD3Q9Y2U8 911 aa28.72■■■□□ 2.19
TDP1-216ENST00000556867 MED23Q9ULK4 1368 aa28.72■■■□□ 2.19
TDP1-216ENST00000556867 CHRNDQ07001 517 aa28.71■■■□□ 2.19
TDP1-216ENST00000556867 CIAPIN1Q6FI81 312 aa28.71■■■□□ 2.19
TDP1-216ENST00000556867 ZNF594Q96JF6 807 aaPredicted RBP28.71■■■□□ 2.19
TDP1-216ENST00000556867 HACL1Q9UJ83 578 aa28.71■■■□□ 2.19
TDP1-216ENST00000556867 TNNQ9UQP3 1299 aa28.71■■■□□ 2.19
TDP1-216ENST00000556867 ECE2O60344 883 aa28.7■■■□□ 2.18
TDP1-216ENST00000556867 TAF1DQ9H5J8 278 aaPredicted RBP28.7■■■□□ 2.18
TDP1-216ENST00000556867 SCN9AQ15858 1988 aa28.7■■■□□ 2.18
TDP1-216ENST00000556867 RAD17O75943 681 aa28.69■■■□□ 2.18
TDP1-216ENST00000556867 TNIP1Q15025 636 aa28.69■■■□□ 2.18
TDP1-216ENST00000556867 DOK7Q18PE1 504 aa28.69■■■□□ 2.18
TDP1-216ENST00000556867 LDHAL6AQ6ZMR3 332 aa28.69■■■□□ 2.18
TDP1-216ENST00000556867 HDAC5Q9UQL6 1122 aa28.69■■■□□ 2.18
TDP1-216ENST00000556867 WTIPA6NIX2 430 aaPredicted RBP28.68■■■□□ 2.18
TDP1-216ENST00000556867 SCNN1DP51172 638 aa28.68■■■□□ 2.18
TDP1-216ENST00000556867 MEIS3Q99687 375 aa28.68■■■□□ 2.18
TDP1-216ENST00000556867 ZNF804BA4D1E1 1349 aa28.68■■■□□ 2.18
TDP1-216ENST00000556867 PSME4Q14997 1843 aa28.67■■■□□ 2.18
TDP1-216ENST00000556867 FSTL1Q12841 308 aa28.67■■■□□ 2.18
TDP1-216ENST00000556867 SMC1BQ8NDV3 1235 aa28.67■■■□□ 2.18
TDP1-216ENST00000556867 CLUAP1Q96AJ1 413 aa28.67■■■□□ 2.18
TDP1-216ENST00000556867 CNNM1Q9NRU3 951 aa28.67■■■□□ 2.18
TDP1-216ENST00000556867 LMOD1P29536 600 aaPredicted RBP28.66■■■□□ 2.18
TDP1-216ENST00000556867 EPHX2P34913 555 aa28.66■■■□□ 2.18
TDP1-216ENST00000556867 G3V3G9 751 aa28.65■■■□□ 2.18
TDP1-216ENST00000556867 GNAI3P08754 354 aa28.65■■■□□ 2.18
TDP1-216ENST00000556867 DCAF8Q5TAQ9 597 aa28.65■■■□□ 2.18
TDP1-216ENST00000556867 ADAMTSL1Q8N6G6 1762 aa28.65■■■□□ 2.18
TDP1-216ENST00000556867 LRRFIP2Q9Y608 721 aaKnown RBP28.64■■■□□ 2.18
TDP1-216ENST00000556867 PSMD14O00487 310 aa28.63■■■□□ 2.17
TDP1-216ENST00000556867 KCNJ4P48050 445 aa28.63■■■□□ 2.17
TDP1-216ENST00000556867 GMPSP49915 693 aaPredicted RBP28.63■■■□□ 2.17
TDP1-216ENST00000556867 TMEM57Q8N5G2 664 aa28.63■■■□□ 2.17
TDP1-216ENST00000556867 HELBQ8NG08 1087 aaPredicted RBP28.63■■■□□ 2.17
TDP1-216ENST00000556867 PUS3Q9BZE2 481 aaKnown RBP28.63■■■□□ 2.17
TDP1-216ENST00000556867 GPRC5DQ9NZD1 345 aa28.63■■■□□ 2.17
TDP1-216ENST00000556867 TAF5LO75529 589 aa28.62■■■□□ 2.17
TDP1-216ENST00000556867 KCNQ5Q9NR82 932 aa28.62■■■□□ 2.17
TDP1-216ENST00000556867 RIPOR2Q9Y4F9 1068 aa28.62■■■□□ 2.17
TDP1-216ENST00000556867 POTEIP0CG38 1075 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 POTEJP0CG39 1038 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 KLRK1P26718 216 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 EPS15P42566 896 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 RFX5P48382 616 aaPredicted RBP28.61■■■□□ 2.17
TDP1-216ENST00000556867 C15orf52Q6ZUT6 534 aaKnown RBP28.61■■■□□ 2.17
TDP1-216ENST00000556867 PODNQ7Z5L7 613 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 PNMA8AQ86V59 439 aaPredicted RBP28.61■■■□□ 2.17
TDP1-216ENST00000556867 TXNRD3Q86VQ6 643 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 LDHDQ86WU2 507 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 FTSJ3Q8IY81 847 aaKnown RBP28.61■■■□□ 2.17
TDP1-216ENST00000556867 DZIP1LQ8IYY4 767 aaKnown RBP28.61■■■□□ 2.17
TDP1-216ENST00000556867 IRS2Q9Y4H2 1338 aa28.61■■■□□ 2.17
TDP1-216ENST00000556867 HSPA6P17066 643 aa28.6■■■□□ 2.17
TDP1-216ENST00000556867 COA1Q9GZY4 146 aa28.6■■■□□ 2.17
TDP1-216ENST00000556867 MROH5Q6ZUA9 1318 aa28.6■■■□□ 2.17
TDP1-216ENST00000556867 ZNF609O15014 1411 aa28.6■■■□□ 2.17
TDP1-216ENST00000556867 SNAP23O00161 211 aa28.59■■■□□ 2.17
TDP1-216ENST00000556867 CHADLQ6NUI6 762 aa28.59■■■□□ 2.17
TDP1-216ENST00000556867 RCAN3Q9UKA8 241 aa28.59■■■□□ 2.17
TDP1-216ENST00000556867 ZNF646O15015 1829 aaPredicted RBP28.58■■■□□ 2.17
TDP1-216ENST00000556867 VIL1P09327 827 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms