RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 TPM4P67936 248 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 UVSSAQ2YD98 709 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 AP1ARQ63HQ0 302 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 TEX11Q8IYF3 940 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 AFAP1L1Q8TED9 768 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SCYL1Q96KG9 808 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 CDCA7Q9BWT1 371 aaPredicted RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 SLC26A6Q9BXS9 759 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 STK31Q9BXU1 1019 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SUFUQ9UMX1 484 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 FAM50BQ9Y247 325 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SNX13Q9Y5W8 968 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 HMGXB3Q12766 1538 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 KIF16BQ96L93 1317 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 TRIM64A6NGJ6 449 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 TRIM64BA6NI03 449 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 AP3D1O14617 1153 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 PEX19P40855 299 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SERPINB4P48594 390 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SATB1Q01826 763 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SEPT2Q15019 361 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 NBPF9Q3BBW0 867 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 RFX8Q6ZV50 586 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 LUZP1Q86V48 1076 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 KCNB2Q92953 911 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 MS4A4AQ96JQ5 239 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 CNDP2Q96KP4 475 aaKnown RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 KCNG1Q9UIX4 513 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 ZNF232Q9UNY5 417 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 ZKSCAN5Q9Y2L8 839 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 ARHGEF37A1IGU5 675 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 XPOTO43592 962 aaKnown RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 PDHA1P08559 390 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 MYCLP12524 364 aaPredicted RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 NUP62P37198 522 aaPredicted RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 MAP3K7CLP57077 242 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 GEMIN4P57678 1058 aaKnown RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 LRMPQ12912 555 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 MAP7Q14244 749 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 TCEA2Q15560 299 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 GFOD2Q3B7J2 385 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 HSP90AA4PQ58FG1 418 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 SNAP47Q5SQN1 464 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 MMS22LQ6ZRQ5 1243 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 UBE2R2Q712K3 238 aaPredicted RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 KIAA1328Q86T90 577 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 TTC30AQ86WT1 665 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 CEP57Q86XR8 500 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 USHBP1Q8N6Y0 703 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 CCDC150Q8NCX0 1101 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 EPS8L1Q8TE68 723 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 IQCDQ96DY2 449 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 CSRNP2Q9H175 543 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 EHMT1Q9H9B1 1298 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 AS3MTQ9HBK9 375 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 FAM114A2Q9NRY5 505 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 EXOC1Q9NV70 894 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 FANCLQ9NW38 375 aa2.12□□□□□ -2.07
KTN1-224ENST00000556631 AATFQ9NY61 560 aaKnown RBP eCLIP2.12□□□□□ -2.07
KTN1-224ENST00000556631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.12□□□□□ -2.072e-8■■■■□ 20.4
KTN1-224ENST00000556631 C6orf203Q9P0P8 240 aaPredicted RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 SUPT16HQ9Y5B9 1047 aaKnown RBP2.12□□□□□ -2.07
KTN1-224ENST00000556631 GOLGA6L7A0A1B0GV03 622 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 CCDC194A0A1B0GVG4 234 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 IQCA1LA6NCM1 817 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 H3BQV1 296 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 TSC22D2O75157 780 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 STARD3NLO95772 234 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 MYCLP1P12525 358 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 STMN1P16949 149 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 MLLT3P42568 568 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 ARF3P61204 181 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 NUCB2P80303 420 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 ARF1P84077 181 aaKnown RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 ACBD5Q5T8D3 534 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 ILDR1Q86SU0 546 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 SNX32Q86XE0 403 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 FAM114A1Q8IWE2 563 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 UNC45BQ8IWX7 931 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 NDUFAF2Q8N183 169 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 FAM184AQ8NB25 1140 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 KIAA1524Q8TCG1 905 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 PRIMPOLQ96LW4 560 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 TBC1D2Q9BYX2 928 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 PRDM5Q9NQX1 630 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 CHRAC1Q9NRG0 131 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 CFDP1Q9UEE9 299 aaPredicted RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 APPL1Q9UKG1 709 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 SUGT1Q9Y2Z0 365 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 CARNS1A5YM72 827 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 TTLL13PA6NNM8 815 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 NOL3O60936 208 aaKnown RBP2.11□□□□□ -2.07
KTN1-224ENST00000556631 VDRP11473 427 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 HAND2P61296 217 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 FKBP4Q02790 459 aaKnown RBP eCLIP2.11□□□□□ -2.07
KTN1-224ENST00000556631 CUL4BQ13620 913 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 TRIM14Q14142 442 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 MAP9Q49MG5 647 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 ELMSAN1Q6PJG2 1045 aa2.11□□□□□ -2.07
KTN1-224ENST00000556631 TMED8Q6PL24 325 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms