RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CCNL1Q9UK58 526 aaPredicted RBP22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 RREB1Q92766 1687 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 THSD7AQ9UPZ6 1657 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 MED23Q9ULK4 1368 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 RAB3GAP1Q15042 981 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 CREB3L3Q68CJ9 461 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 JAKMIP1Q96N16 626 aaKnown RBP22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 SSFA2P28290 1259 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 MCM4P33991 863 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 SCARF1Q14162 830 aa22.02■■□□□ 1.12
SDR39U1-220ENST00000556548 GNPATO15228 680 aa22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 MCM2P49736 904 aa22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 TRPC5Q9UL62 973 aaPredicted RBP22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 TAF5LO75529 589 aa22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 PKP1Q13835 747 aa22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 PI16Q6UXB8 463 aa22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
SDR39U1-220ENST00000556548 QTRT2Q9H974 415 aaKnown RBP22■■□□□ 1.11
SDR39U1-220ENST00000556548 TAF6LQ9Y6J9 622 aa22■■□□□ 1.11
SDR39U1-220ENST00000556548 MYH3P11055 1940 aa22■■□□□ 1.11
SDR39U1-220ENST00000556548 SLC27A2O14975 620 aa22■■□□□ 1.11
SDR39U1-220ENST00000556548 MCMDC2Q4G0Z9 681 aa22■■□□□ 1.11
SDR39U1-220ENST00000556548 USPL1Q5W0Q7 1092 aa22■■□□□ 1.11
SDR39U1-220ENST00000556548 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
SDR39U1-220ENST00000556548 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
SDR39U1-220ENST00000556548 BTAF1O14981 1849 aa21.99■■□□□ 1.11
SDR39U1-220ENST00000556548 SNAP23O00161 211 aa21.99■■□□□ 1.11
SDR39U1-220ENST00000556548 ZKSCAN1P17029 563 aaPredicted RBP21.99■■□□□ 1.11
SDR39U1-220ENST00000556548 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
SDR39U1-220ENST00000556548 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
SDR39U1-220ENST00000556548 PDE8BO95263 885 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 AK2P54819 239 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 COL9A3Q14050 684 aaPredicted RBP21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 ERFEQ4G0M1 354 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 AK7Q96M32 723 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 MPHOSPH8Q99549 860 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 ZAP70P43403 619 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 TBC1D9BQ66K14 1250 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 CLEC4GQ6UXB4 293 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 TTC14Q96N46 770 aa21.98■■□□□ 1.11
SDR39U1-220ENST00000556548 CCDC152Q4G0S7 254 aa21.97■■□□□ 1.11
SDR39U1-220ENST00000556548 KCNB2Q92953 911 aa21.97■■□□□ 1.11
SDR39U1-220ENST00000556548 BCL2L12Q9HB09 334 aa21.97■■□□□ 1.11
SDR39U1-220ENST00000556548 ATRNO75882 1429 aa21.97■■□□□ 1.11
SDR39U1-220ENST00000556548 ONECUT3O60422 494 aaPredicted RBP21.96■■□□□ 1.11
SDR39U1-220ENST00000556548 RPS6KA4O75676 772 aa21.96■■□□□ 1.11
SDR39U1-220ENST00000556548 PHF14O94880 888 aa21.96■■□□□ 1.11
SDR39U1-220ENST00000556548 C3orf67Q6ZVT6 689 aa21.96■■□□□ 1.11
SDR39U1-220ENST00000556548 CWC22Q9HCG8 908 aaKnown RBP21.96■■□□□ 1.11
SDR39U1-220ENST00000556548 RFX7Q2KHR2 1363 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 GTF2E1P29083 439 aaPredicted RBP21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 VPS53Q5VIR6 699 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 RUFY3Q7L099 469 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 PDRG1Q9NUG6 133 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 RNF113AO15541 343 aaKnown RBP21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 MCAMP43121 646 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 CUL4AQ13619 759 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 CCDC24Q8N4L8 307 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 ZSWIM6Q9HCJ5 1215 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 RTCBQ9Y3I0 505 aaKnown RBP21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 CYP46A1Q9Y6A2 500 aa21.95■■□□□ 1.1
SDR39U1-220ENST00000556548 ZPR1O75312 459 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 TCEANC2Q96MN5 208 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 NHSQ6T4R5 1651 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 MROH5Q6ZUA9 1318 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 PHKA1P46020 1223 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 ZMYM1Q5SVZ6 1142 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 RNF20Q5VTR2 975 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 NARFQ9UHQ1 456 aa21.94■■□□□ 1.1
SDR39U1-220ENST00000556548 IGHMBP2P38935 993 aaKnown RBP21.93■■□□□ 1.1
SDR39U1-220ENST00000556548 PUM3Q15397 648 aaKnown RBP21.93■■□□□ 1.1
SDR39U1-220ENST00000556548 DTNBO60941 627 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 ARHGEF1Q92888 912 aaKnown RBP21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 HELLSQ9NRZ9 838 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 ZNF831Q5JPB2 1677 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 M0R2C6 588 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 NUCB2P80303 420 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 CCDC102BQ68D86 513 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 GBP4Q96PP9 640 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 TM6SF1Q9BZW5 370 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 LIMCH1Q9UPQ0 1083 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 MAST3O60307 1309 aa21.92■■□□□ 1.1
SDR39U1-220ENST00000556548 HSP90B1P14625 803 aaKnown RBP21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 GSE1Q14687 1217 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 WASHC4Q2M389 1173 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 LPIN2Q92539 896 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 OSBP2Q969R2 916 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 BCORQ6W2J9 1755 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 LARGE1O95461 756 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 SETDB2Q96T68 719 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 LRRC4BQ9NT99 713 aa21.91■■□□□ 1.1
SDR39U1-220ENST00000556548 FGFR2P21802 821 aa21.9■■□□□ 1.1
SDR39U1-220ENST00000556548 FAM196AQ6ZSG2 479 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms