RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 PUS3Q9BZE2 481 aaKnown RBP11.3□□□□□ -0.6
ACTN1-218ENST00000556343 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-218ENST00000556343 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 FPGT-TNNI3KV9GXZ4 949 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
ACTN1-218ENST00000556343 SLC5A1P13866 664 aa11.29□□□□□ -0.6
ACTN1-218ENST00000556343 KCNJ4P48050 445 aa11.29□□□□□ -0.6
ACTN1-218ENST00000556343 TGFB2P61812 414 aa11.29□□□□□ -0.6
ACTN1-218ENST00000556343 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
ACTN1-218ENST00000556343 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
ACTN1-218ENST00000556343 LPIN2Q92539 896 aa11.29□□□□□ -0.6
ACTN1-218ENST00000556343 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
ACTN1-218ENST00000556343 MX1P20591 662 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 CHRNDQ07001 517 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 ANKIB1Q9P2G1 1089 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 LEMD3Q9Y2U8 911 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 AOX1Q06278 1338 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 TTC41PQ6P2S7 1318 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
ACTN1-218ENST00000556343 A0A1B0GUL7 405 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 EIF5BO60841 1220 aaKnown RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 PDE4AP27815 886 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 C16orf71Q8IYS4 520 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 EAF2Q96CJ1 260 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 CCDC8Q9H0W5 538 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 ECHDC1Q9NTX5 307 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 PPP1R1BQ9UD71 204 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-218ENST00000556343 STAP2Q9UGK3 403 aa11.27□□□□□ -0.61
ACTN1-218ENST00000556343 PDE1AP54750 535 aa11.26□□□□□ -0.61
ACTN1-218ENST00000556343 TIMM10P62072 90 aa11.26□□□□□ -0.61
ACTN1-218ENST00000556343 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
ACTN1-218ENST00000556343 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
ACTN1-218ENST00000556343 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
ACTN1-218ENST00000556343 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
ACTN1-218ENST00000556343 UQCRFS1P1P0C7P4 283 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 TTC39AQ5SRH9 613 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-218ENST00000556343 PIM2Q9P1W9 311 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 XDHP47989 1333 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 MYH3P11055 1940 aa11.25□□□□□ -0.61
ACTN1-218ENST00000556343 LAMB2P55268 1798 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 SOCS7O14512 581 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 TAF5LO75529 589 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 CHRNA5P30532 468 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 BMP2KLQ5H9B9 411 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 MPNDQ8N594 471 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.24□□□□□ -0.61
ACTN1-218ENST00000556343 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 EYA3Q99504 573 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 PODXL2Q9NZ53 605 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
ACTN1-218ENST00000556343 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
ACTN1-218ENST00000556343 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
ACTN1-218ENST00000556343 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 DPEP1P16444 411 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 ATP5JP18859 108 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 FGFR2P21802 821 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 PTGER2P43116 358 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 LRRFIP1Q32MZ4 808 aaKnown RBP11.23□□□□□ -0.61
ACTN1-218ENST00000556343 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-218ENST00000556343 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 ZNF512BQ96KM6 892 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-218ENST00000556343 SGIP1Q9BQI5 828 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 DBNLQ9UJU6 430 aaKnown RBP11.23□□□□□ -0.61
ACTN1-218ENST00000556343 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
ACTN1-218ENST00000556343 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
ACTN1-218ENST00000556343 G3V3G9 751 aa11.22□□□□□ -0.61
ACTN1-218ENST00000556343 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
ACTN1-218ENST00000556343 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-218ENST00000556343 GPSM2P81274 684 aa11.22□□□□□ -0.61
ACTN1-218ENST00000556343 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
ACTN1-218ENST00000556343 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
ACTN1-218ENST00000556343 PRPF40BQ6NWY9 871 aaKnown RBP11.22□□□□□ -0.61
ACTN1-218ENST00000556343 RTKN2Q8IZC4 609 aa11.22□□□□□ -0.61
ACTN1-218ENST00000556343 OTUD7AQ8TE49 926 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-218ENST00000556343 ZNF609O15014 1411 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms