RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 GPR101Q96P66 508 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-221ENST00000556342 UTP14AQ9BVJ6 771 aaKnown RBP14.11□□□□□ -0.15
SYNE2-221ENST00000556342 RTFDC1Q9BY42 306 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-221ENST00000556342 ADARB2Q9NS39 739 aaKnown RBP14.11□□□□□ -0.15
SYNE2-221ENST00000556342 TLL2Q9Y6L7 1015 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 ABCC4O15439 1325 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 GTPBP6O43824 516 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-221ENST00000556342 SUPT20HQ8NEM7 779 aa14.1□□□□□ -0.15
SYNE2-221ENST00000556342 BEGAINQ9BUH8 593 aa14.1□□□□□ -0.15
SYNE2-221ENST00000556342 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
SYNE2-221ENST00000556342 ZNRF3Q9ULT6 936 aa14.1□□□□□ -0.15
SYNE2-221ENST00000556342 POTEMA6NI47 508 aa14.09□□□□□ -0.15
SYNE2-221ENST00000556342 EIF2S2P20042 333 aaKnown RBP14.09□□□□□ -0.15
SYNE2-221ENST00000556342 PROSER3Q2NL68 480 aa14.09□□□□□ -0.15
SYNE2-221ENST00000556342 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
SYNE2-221ENST00000556342 BBOX1O75936 387 aa14.08□□□□□ -0.16
SYNE2-221ENST00000556342 ANXA1P04083 346 aa14.08□□□□□ -0.16
SYNE2-221ENST00000556342 GMPSP49915 693 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-221ENST00000556342 POTEGQ6S5H5 508 aa14.08□□□□□ -0.16
SYNE2-221ENST00000556342 DPP8Q6V1X1 898 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-221ENST00000556342 MPNDQ8N594 471 aa14.08□□□□□ -0.16
SYNE2-221ENST00000556342 CDHR2Q9BYE9 1310 aa14.08□□□□□ -0.16
SYNE2-221ENST00000556342 AOC2O75106 756 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 CELF2O95319 508 aaKnown RBP14.07□□□□□ -0.16
SYNE2-221ENST00000556342 HOXB3P14651 431 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-221ENST00000556342 MAP2K2P36507 400 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 KIAA2012Q0VF49 1180 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 CIAPIN1Q6FI81 312 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 SAPCD2Q86UD0 394 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 NLRP10Q86W26 655 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 SP8Q8IXZ3 490 aa14.07□□□□□ -0.16
SYNE2-221ENST00000556342 GLIS2Q9BZE0 524 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-221ENST00000556342 HCLS1P14317 486 aaPredicted RBP14.06□□□□□ -0.16
SYNE2-221ENST00000556342 FAM161AQ3B820 660 aa14.06□□□□□ -0.16
SYNE2-221ENST00000556342 HSP90AB3PQ58FF7 597 aa14.06□□□□□ -0.16
SYNE2-221ENST00000556342 BBXQ8WY36 941 aaPredicted RBP14.06□□□□□ -0.16
SYNE2-221ENST00000556342 BABAM1Q9NWV8 329 aa14.06□□□□□ -0.16
SYNE2-221ENST00000556342 PGAP2Q9UHJ9 254 aa14.06□□□□□ -0.16
SYNE2-221ENST00000556342 RAD17O75943 681 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 HIRAP54198 1017 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-221ENST00000556342 RIPK4P57078 832 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 GRAPQ13588 217 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 TNIP1Q15025 636 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 DDX46Q7L014 1031 aaKnown RBP14.05□□□□□ -0.16
SYNE2-221ENST00000556342 COPS6Q7L5N1 327 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 GRAPLQ8TC17 118 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-221ENST00000556342 XAGE3Q8WTP9 111 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 ZC3H15Q8WU90 426 aaKnown RBP14.05□□□□□ -0.16
SYNE2-221ENST00000556342 HHIPL1Q96JK4 782 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 TSKSQ9UJT2 592 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 TRPM7Q96QT4 1865 aa14.05□□□□□ -0.16
SYNE2-221ENST00000556342 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
SYNE2-221ENST00000556342 TCIRG1Q13488 830 aa14.04□□□□□ -0.16
SYNE2-221ENST00000556342 TRPM4Q8TD43 1214 aa14.04□□□□□ -0.16
SYNE2-221ENST00000556342 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
SYNE2-221ENST00000556342 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
SYNE2-221ENST00000556342 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
SYNE2-221ENST00000556342 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
SYNE2-221ENST00000556342 CCDC85CA6NKD9 419 aa14.03□□□□□ -0.16
SYNE2-221ENST00000556342 YDJCA8MPS7 323 aa14.03□□□□□ -0.16
SYNE2-221ENST00000556342 CA12O43570 354 aa14.03□□□□□ -0.16
SYNE2-221ENST00000556342 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
SYNE2-221ENST00000556342 ZNF408Q9H9D4 720 aa14.03□□□□□ -0.16
SYNE2-221ENST00000556342 SHTN1A0MZ66 631 aa14.02□□□□□ -0.17
SYNE2-221ENST00000556342 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
SYNE2-221ENST00000556342 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
SYNE2-221ENST00000556342 LMOD3Q0VAK6 560 aa14.02□□□□□ -0.17
SYNE2-221ENST00000556342 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
SYNE2-221ENST00000556342 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.17
SYNE2-221ENST00000556342 DUOX1Q9NRD9 1551 aa14.01□□□□□ -0.17
SYNE2-221ENST00000556342 H7C1D1 291 aa14.01□□□□□ -0.17
SYNE2-221ENST00000556342 TMC2Q8TDI7 906 aa14.01□□□□□ -0.17
SYNE2-221ENST00000556342 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
SYNE2-221ENST00000556342 RGS19P49795 217 aa14□□□□□ -0.17
SYNE2-221ENST00000556342 KRT24Q2M2I5 525 aa14□□□□□ -0.17
SYNE2-221ENST00000556342 DPF2Q92785 391 aa14□□□□□ -0.17
SYNE2-221ENST00000556342 ZNF428Q96B54 188 aa14□□□□□ -0.17
SYNE2-221ENST00000556342 LAMB2P55268 1798 aa14□□□□□ -0.17
SYNE2-221ENST00000556342 PSMD14O00487 310 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 CHL1O00533 1208 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 SLC34A2O95436 690 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 MLLT1Q03111 559 aaPredicted RBP13.99□□□□□ -0.17
SYNE2-221ENST00000556342 NOGQ13253 232 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
SYNE2-221ENST00000556342 LRRC37AA6NMS7 1700 aa13.98□□□□□ -0.17
SYNE2-221ENST00000556342 HUNKP57058 714 aa13.98□□□□□ -0.17
SYNE2-221ENST00000556342 SF3B3Q15393 1217 aaKnown RBP13.98□□□□□ -0.17
SYNE2-221ENST00000556342 DLK2Q6UY11 383 aa13.98□□□□□ -0.17
SYNE2-221ENST00000556342 SAMD7Q7Z3H4 446 aa13.98□□□□□ -0.17
SYNE2-221ENST00000556342 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
SYNE2-221ENST00000556342 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
SYNE2-221ENST00000556342 CELF1Q92879 486 aaKnown RBP13.98□□□□□ -0.17
SYNE2-221ENST00000556342 ZIC5Q96T25 663 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms