RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 EIF2AK2P19525 551 aaKnown RBP6.47□□□□□ -1.37
ATXN3-240ENST00000556339 TARSP26639 723 aaKnown RBP6.47□□□□□ -1.37
ATXN3-240ENST00000556339 FOXD4L6Q3SYB3 417 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-240ENST00000556339 FOXD4L3Q6VB84 417 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-240ENST00000556339 FRRS1LQ9P0K9 344 aa6.47□□□□□ -1.37
ATXN3-240ENST00000556339 TNIKQ9UKE5 1360 aa6.46□□□□□ -1.37
ATXN3-240ENST00000556339 FOXO3O43524 673 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 MAP3K6O95382 1288 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 INPP5BP32019 993 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 C11orf91Q3C1V1 193 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 PERM1Q5SV97 790 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 HFE2Q6ZVN8 426 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 FNBP4Q8N3X1 1017 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-240ENST00000556339 DTWD1Q8N5C7 304 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 LPIN3Q9BQK8 851 aa6.46□□□□□ -1.38
ATXN3-240ENST00000556339 DMGDHQ9UI17 866 aaKnown RBP6.46□□□□□ -1.38
ATXN3-240ENST00000556339 CUL7Q14999 1698 aa6.45□□□□□ -1.38
ATXN3-240ENST00000556339 MICAL2O94851 1124 aa6.45□□□□□ -1.38
ATXN3-240ENST00000556339 IREB2P48200 963 aaKnown RBP6.45□□□□□ -1.38
ATXN3-240ENST00000556339 KANK4Q5T7N3 995 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-240ENST00000556339 FBXO11Q86XK2 927 aa6.45□□□□□ -1.38
ATXN3-240ENST00000556339 CMTR1Q8N1G2 835 aaKnown RBP6.45□□□□□ -1.38
ATXN3-240ENST00000556339 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
ATXN3-240ENST00000556339 SMG9Q9H0W8 520 aaKnown RBP6.45□□□□□ -1.38
ATXN3-240ENST00000556339 RBSNQ9H1K0 784 aa6.45□□□□□ -1.38
ATXN3-240ENST00000556339 ZFATQ9P243 1243 aa6.45□□□□□ -1.38
ATXN3-240ENST00000556339 KIF13AQ9H1H9 1805 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 GHRHP01286 108 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 RFX1P22670 979 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 GPLD1P80108 840 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 LRP8Q14114 963 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 RGL4Q8IZJ4 473 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 TRPM4Q8TD43 1214 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 WFDC12Q8WWY7 111 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 IFT43Q96FT9 208 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 QTRT2Q9H974 415 aaKnown RBP6.44□□□□□ -1.38
ATXN3-240ENST00000556339 ABCC10Q5T3U5 1492 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 RUSC2Q8N2Y8 1516 aa6.44□□□□□ -1.38
ATXN3-240ENST00000556339 XYLBO75191 536 aa6.43□□□□□ -1.38
ATXN3-240ENST00000556339 PSAPP07602 524 aa6.43□□□□□ -1.38
ATXN3-240ENST00000556339 RANGAP1P46060 587 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-240ENST00000556339 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
ATXN3-240ENST00000556339 C11orf16Q9NQ32 467 aa6.43□□□□□ -1.38
ATXN3-240ENST00000556339 USP20Q9Y2K6 914 aa6.43□□□□□ -1.38
ATXN3-240ENST00000556339 RTCBQ9Y3I0 505 aaKnown RBP6.43□□□□□ -1.38
ATXN3-240ENST00000556339 RAPGEF2Q9Y4G8 1499 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 ZBTB42B2RXF5 422 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 GRNP28799 593 aaKnown RBP6.42□□□□□ -1.38
ATXN3-240ENST00000556339 WEE1P30291 646 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 NRLP54845 237 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 GDF6Q6KF10 455 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-240ENST00000556339 IGF2-ASQ6U949 168 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 TREML1Q86YW5 311 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 MYO19Q96H55 970 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 ADCY10Q96PN6 1610 aa6.42□□□□□ -1.38
ATXN3-240ENST00000556339 ARID3CA6NKF2 412 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 NOS3P29474 1203 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 PLAURQ03405 335 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 CDCA8Q53HL2 280 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 PLD4Q96BZ4 506 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 NSUN5Q96P11 429 aaKnown RBP6.41□□□□□ -1.38
ATXN3-240ENST00000556339 TLR7Q9NYK1 1049 aaKnown RBP6.41□□□□□ -1.38
ATXN3-240ENST00000556339 ASXL2Q76L83 1435 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 UACAQ9BZF9 1416 aa6.41□□□□□ -1.38
ATXN3-240ENST00000556339 IQGAP2Q13576 1575 aa6.4□□□□□ -1.38
ATXN3-240ENST00000556339 A6NJR5 290 aa6.4□□□□□ -1.38
ATXN3-240ENST00000556339 GRIK5Q16478 980 aa6.4□□□□□ -1.38
ATXN3-240ENST00000556339 DCAF11Q8TEB1 546 aa6.4□□□□□ -1.38
ATXN3-240ENST00000556339 TTC9Q92623 222 aa6.4□□□□□ -1.38
ATXN3-240ENST00000556339 ARXQ96QS3 562 aa6.4□□□□□ -1.38
ATXN3-240ENST00000556339 PLB1Q6P1J6 1458 aa6.4□□□□□ -1.39
ATXN3-240ENST00000556339 MAPKBP1O60336 1514 aa6.4□□□□□ -1.39
ATXN3-240ENST00000556339 LOC102724428A0A0B4J2F2 783 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 J3QW42 95 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 HYAL3O43820 417 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-240ENST00000556339 SIK1P57059 783 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 TMEM132AQ24JP5 1023 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-240ENST00000556339 AKTIPQ9H8T0 292 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 NOVA2Q9UNW9 492 aaKnown RBP6.39□□□□□ -1.39
ATXN3-240ENST00000556339 ABCC2Q92887 1545 aa6.39□□□□□ -1.39
ATXN3-240ENST00000556339 OPLAHO14841 1288 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 PRMT3O60678 531 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 MEGF10Q96KG7 1140 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 PRIMPOLQ96LW4 560 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
ATXN3-240ENST00000556339 LRFN2Q9ULH4 789 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 DIP2BQ9P265 1576 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 KDM6BO15054 1643 aa6.38□□□□□ -1.39
ATXN3-240ENST00000556339 MMP20O60882 483 aa6.37□□□□□ -1.39
ATXN3-240ENST00000556339 DEAF1O75398 565 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-240ENST00000556339 EGFRP00533 1210 aa6.37□□□□□ -1.39
ATXN3-240ENST00000556339 GLB1P16278 677 aa6.37□□□□□ -1.39
ATXN3-240ENST00000556339 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-240ENST00000556339 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
ATXN3-240ENST00000556339 ZNF777Q9ULD5 760 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-240ENST00000556339 DISP1Q96F81 1524 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 UHRF1BP1LA0JNW5 1464 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 GOLGA3Q08378 1498 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms