RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
TGFB3-204ENST00000556285 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
TGFB3-204ENST00000556285 SAMD7Q7Z3H4 446 aa17.18■□□□□ 0.34
TGFB3-204ENST00000556285 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
TGFB3-204ENST00000556285 ZNF408Q9H9D4 720 aa17.18■□□□□ 0.34
TGFB3-204ENST00000556285 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
TGFB3-204ENST00000556285 MICALL2Q8IY33 904 aa17.17■□□□□ 0.34
TGFB3-204ENST00000556285 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
TGFB3-204ENST00000556285 USP48Q86UV5 1035 aa17.16■□□□□ 0.34
TGFB3-204ENST00000556285 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
TGFB3-204ENST00000556285 TBC1D16Q8TBP0 767 aa17.16■□□□□ 0.34
TGFB3-204ENST00000556285 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
TGFB3-204ENST00000556285 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
TGFB3-204ENST00000556285 ECE2O60344 883 aa17.15■□□□□ 0.34
TGFB3-204ENST00000556285 ECE1P42892 770 aa17.15■□□□□ 0.34
TGFB3-204ENST00000556285 TBC1D10BQ4KMP7 808 aaPredicted RBP17.15■□□□□ 0.34
TGFB3-204ENST00000556285 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
TGFB3-204ENST00000556285 CCDC30Q5VVM6 783 aa17.15■□□□□ 0.34
TGFB3-204ENST00000556285 CCDC191Q8NCU4 936 aa17.15■□□□□ 0.34
TGFB3-204ENST00000556285 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
TGFB3-204ENST00000556285 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
TGFB3-204ENST00000556285 ASTN2O75129 1339 aaPredicted RBP17.15■□□□□ 0.34
TGFB3-204ENST00000556285 G2E3Q7L622 706 aa17.14■□□□□ 0.33
TGFB3-204ENST00000556285 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
TGFB3-204ENST00000556285 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 H7C1D1 291 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 PDE8AO60658 829 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
TGFB3-204ENST00000556285 UFL1O94874 794 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
TGFB3-204ENST00000556285 CCDC152Q4G0S7 254 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 RBM26Q5T8P6 1007 aaKnown RBP17.12■□□□□ 0.33
TGFB3-204ENST00000556285 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
TGFB3-204ENST00000556285 DPF2Q92785 391 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 EYA3Q99504 573 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
TGFB3-204ENST00000556285 MAP2K2P36507 400 aa17.11■□□□□ 0.33
TGFB3-204ENST00000556285 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
TGFB3-204ENST00000556285 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
TGFB3-204ENST00000556285 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
TGFB3-204ENST00000556285 ANKIB1Q9P2G1 1089 aa17.11■□□□□ 0.33
TGFB3-204ENST00000556285 A0A1B0GUL6 1792 aa17.1■□□□□ 0.33
TGFB3-204ENST00000556285 FAM155AB1AL88 458 aaPredicted RBP17.1■□□□□ 0.33
TGFB3-204ENST00000556285 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
TGFB3-204ENST00000556285 HHIPL1Q96JK4 782 aa17.1■□□□□ 0.33
TGFB3-204ENST00000556285 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
TGFB3-204ENST00000556285 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
TGFB3-204ENST00000556285 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
TGFB3-204ENST00000556285 GGA1Q9UJY5 639 aa17.09■□□□□ 0.33
TGFB3-204ENST00000556285 SCAF8Q9UPN6 1271 aaKnown RBP17.09■□□□□ 0.33
TGFB3-204ENST00000556285 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
TGFB3-204ENST00000556285 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
TGFB3-204ENST00000556285 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
TGFB3-204ENST00000556285 CTSWP56202 376 aa17.08■□□□□ 0.32
TGFB3-204ENST00000556285 HUNKP57058 714 aa17.08■□□□□ 0.32
TGFB3-204ENST00000556285 ANKRD18AQ8IVF6 992 aa17.08■□□□□ 0.32
TGFB3-204ENST00000556285 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
TGFB3-204ENST00000556285 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
TGFB3-204ENST00000556285 CCDC85CA6NKD9 419 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
TGFB3-204ENST00000556285 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 GREM2Q9H772 168 aa17.07■□□□□ 0.32
TGFB3-204ENST00000556285 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
TGFB3-204ENST00000556285 XDHP47989 1333 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 G3V3G9 751 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
TGFB3-204ENST00000556285 IL16Q14005 1332 aa17.05■□□□□ 0.32
TGFB3-204ENST00000556285 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
TGFB3-204ENST00000556285 H7C1W4 665 aa17.05■□□□□ 0.32
TGFB3-204ENST00000556285 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
TGFB3-204ENST00000556285 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
TGFB3-204ENST00000556285 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
TGFB3-204ENST00000556285 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
TGFB3-204ENST00000556285 RGMBQ6NW40 437 aa17.04■□□□□ 0.32
TGFB3-204ENST00000556285 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
TGFB3-204ENST00000556285 DCPSQ96C86 337 aaKnown RBP17.04■□□□□ 0.32
TGFB3-204ENST00000556285 GMLQ99445 158 aa17.04■□□□□ 0.32
TGFB3-204ENST00000556285 CDC5LQ99459 802 aaKnown RBP17.04■□□□□ 0.32
TGFB3-204ENST00000556285 MXD3Q9BW11 206 aa17.04■□□□□ 0.32
TGFB3-204ENST00000556285 MINPP1Q9UNW1 487 aa17.04■□□□□ 0.32
TGFB3-204ENST00000556285 ZNF609O15014 1411 aa17.04■□□□□ 0.32
TGFB3-204ENST00000556285 PAPPA2Q9BXP8 1791 aa17.03■□□□□ 0.32
TGFB3-204ENST00000556285 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
TGFB3-204ENST00000556285 FLIIQ13045 1269 aa17.03■□□□□ 0.32
TGFB3-204ENST00000556285 GCKRQ14397 625 aa17.03■□□□□ 0.32
TGFB3-204ENST00000556285 BSDC1Q9NW68 430 aaPredicted RBP17.03■□□□□ 0.32
TGFB3-204ENST00000556285 VAMP4O75379 141 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms