RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 EYA3Q99504 573 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 MPHOSPH8Q99549 860 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 USP44Q9H0E7 712 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 MINPP1Q9UNW1 487 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 RIMBP2O15034 1052 aa19.14■□□□□ 0.65
ACTN1-217ENST00000556203 TOMM70O94826 608 aa19.14■□□□□ 0.65
ACTN1-217ENST00000556203 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
ACTN1-217ENST00000556203 L3MBTL3Q96JM7 780 aaPredicted RBP19.14■□□□□ 0.65
ACTN1-217ENST00000556203 ZNRF3Q9ULT6 936 aa19.14■□□□□ 0.65
ACTN1-217ENST00000556203 XDHP47989 1333 aa19.14■□□□□ 0.65
ACTN1-217ENST00000556203 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
ACTN1-217ENST00000556203 ATP2B4P23634 1241 aa19.13■□□□□ 0.65
ACTN1-217ENST00000556203 CCDC57Q2TAC2 916 aa19.13■□□□□ 0.65
ACTN1-217ENST00000556203 GPC2Q8N158 579 aa19.13■□□□□ 0.65
ACTN1-217ENST00000556203 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
ACTN1-217ENST00000556203 MYH3P11055 1940 aa19.13■□□□□ 0.65
ACTN1-217ENST00000556203 WDR90Q96KV7 1748 aa19.12■□□□□ 0.65
ACTN1-217ENST00000556203 BICC1Q9H694 974 aaKnown RBP19.12■□□□□ 0.65
ACTN1-217ENST00000556203 IQCA1LA6NCM1 817 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 TRIM27P14373 513 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 TAF7LQ5H9L4 462 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 ATF7IPQ6VMQ6 1270 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 ANKRD44Q8N8A2 993 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 RBM46Q8TBY0 533 aaKnown RBP19.11■□□□□ 0.65
ACTN1-217ENST00000556203 ZC3H12CQ9C0D7 883 aaKnown RBP19.11■□□□□ 0.65
ACTN1-217ENST00000556203 DBNDD1Q9H9R9 158 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 LTBP1Q14766 1721 aa19.11■□□□□ 0.65
ACTN1-217ENST00000556203 YDJCA8MPS7 323 aa19.1■□□□□ 0.65
ACTN1-217ENST00000556203 CXCL9Q07325 125 aa19.1■□□□□ 0.65
ACTN1-217ENST00000556203 DOK7Q18PE1 504 aa19.1■□□□□ 0.65
ACTN1-217ENST00000556203 RABL6Q3YEC7 729 aaPredicted RBP19.1■□□□□ 0.65
ACTN1-217ENST00000556203 ZNF594Q96JF6 807 aaPredicted RBP19.1■□□□□ 0.65
ACTN1-217ENST00000556203 TNNQ9UQP3 1299 aa19.1■□□□□ 0.65
ACTN1-217ENST00000556203 RAD17O75943 681 aa19.09■□□□□ 0.65
ACTN1-217ENST00000556203 CHRNDQ07001 517 aa19.09■□□□□ 0.65
ACTN1-217ENST00000556203 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
ACTN1-217ENST00000556203 INTS3Q68E01 1043 aaKnown RBP19.09■□□□□ 0.65
ACTN1-217ENST00000556203 ANKRD2Q9GZV1 360 aa19.09■□□□□ 0.65
ACTN1-217ENST00000556203 WTIPA6NIX2 430 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-217ENST00000556203 G3V3G9 751 aa19.08■□□□□ 0.64
ACTN1-217ENST00000556203 ECE2O60344 883 aa19.08■□□□□ 0.64
ACTN1-217ENST00000556203 UBTFL1P0CB47 393 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-217ENST00000556203 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.64
ACTN1-217ENST00000556203 CIAPIN1Q6FI81 312 aa19.08■□□□□ 0.64
ACTN1-217ENST00000556203 CLUAP1Q96AJ1 413 aa19.08■□□□□ 0.64
ACTN1-217ENST00000556203 TAF1DQ9H5J8 278 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-217ENST00000556203 HACL1Q9UJ83 578 aa19.08■□□□□ 0.64
ACTN1-217ENST00000556203 TNIP1Q15025 636 aa19.07■□□□□ 0.64
ACTN1-217ENST00000556203 LDHAL6AQ6ZMR3 332 aa19.07■□□□□ 0.64
ACTN1-217ENST00000556203 LEMD3Q9Y2U8 911 aa19.07■□□□□ 0.64
ACTN1-217ENST00000556203 LMOD1P29536 600 aaPredicted RBP19.06■□□□□ 0.64
ACTN1-217ENST00000556203 EPHX2P34913 555 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 KCNJ4P48050 445 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 SCNN1DP51172 638 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 MEIS3Q99687 375 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 CNNM1Q9NRU3 951 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 MED23Q9ULK4 1368 aa19.06■□□□□ 0.64
ACTN1-217ENST00000556203 ZNF804BA4D1E1 1349 aa19.05■□□□□ 0.64
ACTN1-217ENST00000556203 SPEF2Q9C093 1822 aa19.05■□□□□ 0.64
ACTN1-217ENST00000556203 TAF5LO75529 589 aa19.05■□□□□ 0.64
ACTN1-217ENST00000556203 FSTL1Q12841 308 aa19.05■□□□□ 0.64
ACTN1-217ENST00000556203 HELBQ8NG08 1087 aaPredicted RBP19.05■□□□□ 0.64
ACTN1-217ENST00000556203 PSMD14O00487 310 aa19.04■□□□□ 0.64
ACTN1-217ENST00000556203 POTEIP0CG38 1075 aa19.04■□□□□ 0.64
ACTN1-217ENST00000556203 POTEJP0CG39 1038 aa19.04■□□□□ 0.64
ACTN1-217ENST00000556203 EPS15P42566 896 aa19.04■□□□□ 0.64
ACTN1-217ENST00000556203 GMPSP49915 693 aaPredicted RBP19.04■□□□□ 0.64
ACTN1-217ENST00000556203 EAPPQ56P03 285 aaPredicted RBP19.04■□□□□ 0.64
ACTN1-217ENST00000556203 KCNQ5Q9NR82 932 aa19.04■□□□□ 0.64
ACTN1-217ENST00000556203 HDAC5Q9UQL6 1122 aa19.04■□□□□ 0.64
ACTN1-217ENST00000556203 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
ACTN1-217ENST00000556203 PLIN1O60240 522 aa19.03■□□□□ 0.64
ACTN1-217ENST00000556203 KLRK1P26718 216 aa19.03■□□□□ 0.64
ACTN1-217ENST00000556203 TXNRD3Q86VQ6 643 aa19.03■□□□□ 0.64
ACTN1-217ENST00000556203 TMEM57Q8N5G2 664 aa19.03■□□□□ 0.64
ACTN1-217ENST00000556203 PUS3Q9BZE2 481 aaKnown RBP19.03■□□□□ 0.64
ACTN1-217ENST00000556203 SNAP23O00161 211 aa19.02■□□□□ 0.64
ACTN1-217ENST00000556203 GNAI3P08754 354 aa19.02■□□□□ 0.64
ACTN1-217ENST00000556203 FTSJ3Q8IY81 847 aaKnown RBP19.02■□□□□ 0.64
ACTN1-217ENST00000556203 KLHDC4Q8TBB5 520 aa19.02■□□□□ 0.64
ACTN1-217ENST00000556203 GPRC5DQ9NZD1 345 aa19.02■□□□□ 0.64
ACTN1-217ENST00000556203 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
ACTN1-217ENST00000556203 HSPA6P17066 643 aa19.01■□□□□ 0.63
ACTN1-217ENST00000556203 PODNQ7Z5L7 613 aa19.01■□□□□ 0.63
ACTN1-217ENST00000556203 PNMA8AQ86V59 439 aaPredicted RBP19.01■□□□□ 0.63
ACTN1-217ENST00000556203 LDHDQ86WU2 507 aa19.01■□□□□ 0.63
ACTN1-217ENST00000556203 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
ACTN1-217ENST00000556203 COA1Q9GZY4 146 aa19.01■□□□□ 0.63
ACTN1-217ENST00000556203 RIPOR2Q9Y4F9 1068 aa19.01■□□□□ 0.63
ACTN1-217ENST00000556203 SCN4AP35499 1836 aa19■□□□□ 0.63
ACTN1-217ENST00000556203 RFX5P48382 616 aaPredicted RBP19■□□□□ 0.63
ACTN1-217ENST00000556203 LRRC24Q50LG9 513 aa19■□□□□ 0.63
ACTN1-217ENST00000556203 CHADLQ6NUI6 762 aa19■□□□□ 0.63
ACTN1-217ENST00000556203 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
ACTN1-217ENST00000556203 MROH5Q6ZUA9 1318 aa19■□□□□ 0.63
ACTN1-217ENST00000556203 VIL1P09327 827 aaKnown RBP18.99■□□□□ 0.63
ACTN1-217ENST00000556203 RLBP1P12271 317 aa18.99■□□□□ 0.63
ACTN1-217ENST00000556203 RCAN3Q9UKA8 241 aa18.99■□□□□ 0.63
ACTN1-217ENST00000556203 IRS2Q9Y4H2 1338 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms