RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ADCY9O60503 1353 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 ABCA3Q99758 1704 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 ZBTB24O43167 697 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-235ENST00000556082 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-235ENST00000556082 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
ATXN3-235ENST00000556082 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 SSH3Q8TE77 659 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-235ENST00000556082 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 N4BP2Q86UW6 1770 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-235ENST00000556082 UTYO14607 1347 aa10.28□□□□□ -0.76
ATXN3-235ENST00000556082 PARP4Q9UKK3 1724 aaKnown RBP10.27□□□□□ -0.76
ATXN3-235ENST00000556082 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
ATXN3-235ENST00000556082 MTX1Q13505 466 aa10.27□□□□□ -0.77
ATXN3-235ENST00000556082 LINS1Q8NG48 757 aa10.27□□□□□ -0.77
ATXN3-235ENST00000556082 TBC1D32Q96NH3 1257 aa10.27□□□□□ -0.77
ATXN3-235ENST00000556082 COL22A1Q8NFW1 1626 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-235ENST00000556082 RAB11FIP3O75154 756 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 MMP16P51512 607 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 MYT1Q01538 1121 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 PROSER3Q2NL68 480 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 LRP10Q7Z4F1 713 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
ATXN3-235ENST00000556082 CCDC102AQ96A19 550 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 ANP32EQ9BTT0 268 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 MAP3K2Q9Y2U5 619 aa10.26□□□□□ -0.77
ATXN3-235ENST00000556082 LRRFIP2Q9Y608 721 aaKnown RBP10.26□□□□□ -0.77
ATXN3-235ENST00000556082 PRAMEF22A3QJZ6 481 aa10.25□□□□□ -0.77
ATXN3-235ENST00000556082 TTC22Q5TAA0 569 aa10.25□□□□□ -0.77
ATXN3-235ENST00000556082 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
ATXN3-235ENST00000556082 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-235ENST00000556082 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
ATXN3-235ENST00000556082 BTG4Q9NY30 223 aa10.25□□□□□ -0.77
ATXN3-235ENST00000556082 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
ATXN3-235ENST00000556082 COL14A1Q05707 1796 aaKnown RBP10.24□□□□□ -0.77
ATXN3-235ENST00000556082 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
ATXN3-235ENST00000556082 PNMA6EA0A0J9YXQ4 647 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 ANXA1P04083 346 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 HSP90AB4PQ58FF6 505 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 RNF19BQ6ZMZ0 732 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 LRRCC1Q9C099 1032 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 STAP2Q9UGK3 403 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 USP16Q9Y5T5 823 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 ROBO1Q9Y6N7 1651 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
ATXN3-235ENST00000556082 FAM187AA6NFU0 413 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 TOM1O60784 492 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 CDC45O75419 566 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 NBPF7P0C2Y1 421 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-235ENST00000556082 RBM25P49756 843 aaKnown RBP10.23□□□□□ -0.77
ATXN3-235ENST00000556082 PPP1R42Q7Z4L9 355 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 C16orf71Q8IYS4 520 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-235ENST00000556082 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 METTL22Q9BUU2 404 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-235ENST00000556082 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-235ENST00000556082 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
ATXN3-235ENST00000556082 SALL3Q9BXA9 1300 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 COL15A1P39059 1388 aa10.23□□□□□ -0.77
ATXN3-235ENST00000556082 GRM8O00222 908 aa10.22□□□□□ -0.77
ATXN3-235ENST00000556082 GSPT1P15170 499 aaKnown RBP10.22□□□□□ -0.77
ATXN3-235ENST00000556082 NEXNQ0ZGT2 675 aa10.22□□□□□ -0.77
ATXN3-235ENST00000556082 COPS6Q7L5N1 327 aa10.22□□□□□ -0.77
ATXN3-235ENST00000556082 RIC3Q7Z5B4 369 aa10.22□□□□□ -0.77
ATXN3-235ENST00000556082 DDX54Q8TDD1 881 aaKnown RBP10.22□□□□□ -0.77
ATXN3-235ENST00000556082 TEX13AQ9BXU3 409 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-235ENST00000556082 C22orf23Q9BZE7 217 aa10.22□□□□□ -0.77
ATXN3-235ENST00000556082 C9orf78Q9NZ63 289 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-235ENST00000556082 AOX1Q06278 1338 aa10.22□□□□□ -0.77
ATXN3-235ENST00000556082 HOXA2O43364 376 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 IGKV5-2P06315 115 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 PDE1AP54750 535 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 FOXC1Q12948 553 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 BECN1Q14457 450 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 TBC1D9Q6ZT07 1266 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 PLBD2Q8NHP8 589 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.77
ATXN3-235ENST00000556082 NEURL1BA8MQ27 555 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 EXOC5O00471 708 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 SRGAP3O43295 1099 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 SMARCA5O60264 1052 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-235ENST00000556082 SURF6O75683 361 aaKnown RBP10.2□□□□□ -0.78
ATXN3-235ENST00000556082 DXOO77932 396 aaKnown RBP10.2□□□□□ -0.78
ATXN3-235ENST00000556082 GCKRQ14397 625 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 KCPQ6ZWJ8 1503 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 OTUD7AQ8TE49 926 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-235ENST00000556082 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 TMOD3Q9NYL9 352 aa10.2□□□□□ -0.78
ATXN3-235ENST00000556082 GLI3P10071 1580 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 MYL6BP14649 208 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms