RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 PLA2G12BQ9BX93 195 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 SEC31BQ9NQW1 1179 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 BSDC1Q9NW68 430 aaPredicted RBP9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 GGA1Q9UJY5 639 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 CA12O43570 354 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 IGKV5-2P06315 115 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 CCDC184Q52MB2 194 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 MICALL2Q8IY33 904 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 AGBL3Q8NEM8 1001 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 CAPNS2Q96L46 248 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 BEGAINQ9BUH8 593 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 DBNDD1Q9H9R9 158 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 XDHP47989 1333 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 LTBP1Q14766 1721 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 RTL9Q8NET4 1388 aa9.98□□□□□ -0.81
PTCSC3-201ENST00000556013 LAMB2P55268 1798 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 G3V3G9 751 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 ECE2O60344 883 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 VAMP4O75379 141 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 CELF2O95319 508 aaKnown RBP9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 CTSWP56202 376 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 GLIS2Q9BZE0 524 aaPredicted RBP9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 ZBTB12Q9Y330 459 aaPredicted RBP9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 ZNF609O15014 1411 aa9.97□□□□□ -0.81
PTCSC3-201ENST00000556013 TRAF5O00463 557 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 UFL1O94874 794 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 CSF1RP07333 972 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 ZNF280AP59817 542 aaPredicted RBP9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 TRPM4Q8TD43 1214 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 TSR2Q969E8 191 aaKnown RBP9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 DCPSQ96C86 337 aaKnown RBP9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 MRS2Q9HD23 443 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 MINPP1Q9UNW1 487 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 LEMD3Q9Y2U8 911 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 DUOX1Q9NRD9 1551 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.82
PTCSC3-201ENST00000556013 LBX1P52954 281 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 FMR1Q06787 632 aaKnown RBP eCLIP9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 FLIIQ13045 1269 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 NOGQ13253 232 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 GCKRQ14397 625 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 CYP4F22Q6NT55 531 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 RSBN1LQ6PCB5 846 aaPredicted RBP9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 SAMD7Q7Z3H4 446 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 DNAAF4Q8WXU2 420 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 ZNF428Q96B54 188 aa9.95□□□□□ -0.82
PTCSC3-201ENST00000556013 USP17L3A6NCW0 530 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 USP17L4A6NCW7 530 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 CCT4P50991 539 aaKnown RBP9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 BRPF1P55201 1214 aaPredicted RBP9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 G2E3Q7L622 706 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 USP17L1Q7RTZ2 530 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 KRT26Q7Z3Y9 468 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 USP48Q86UV5 1035 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 C2orf69Q8N8R5 385 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 CCDC102AQ96A19 550 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 GMLQ99445 158 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 COA1Q9GZY4 146 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 KCNQ5Q9NR82 932 aa9.94□□□□□ -0.82
PTCSC3-201ENST00000556013 TAF1P21675 1872 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 MED23Q9ULK4 1368 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 MYO3BQ8WXR4 1341 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 PITPNM2Q9BZ72 1349 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 CASP7P55210 303 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 FKBP1BP68106 108 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 FKBP5Q13451 457 aaPredicted RBP9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 CWF19L2Q2TBE0 894 aaKnown RBP9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 KIF4BQ2VIQ3 1234 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 TBC1D10BQ4KMP7 808 aaPredicted RBP9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 STRIP1Q5VSL9 837 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 PAXIP1Q6ZW49 1069 aaPredicted RBP9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 GREM2Q9H772 168 aa9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 GBA2Q9HCG7 927 aaPredicted RBP9.93□□□□□ -0.82
PTCSC3-201ENST00000556013 CACNA1FO60840 1977 aa9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 SHTN1A0MZ66 631 aa9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 HUNKP57058 714 aa9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 RBM26Q5T8P6 1007 aaKnown RBP9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 RGMBQ6NW40 437 aa9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 C15orf52Q6ZUT6 534 aaKnown RBP9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 UBE3BQ7Z3V4 1068 aa9.92□□□□□ -0.82
PTCSC3-201ENST00000556013 OGFOD1Q8N543 542 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms