RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 NDUFAB1O14561 156 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 PSMA7O14818 248 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 TTF2Q9UNY4 1162 aaKnown RBP19.93■□□□□ 0.78
SYNE3-204ENST00000555759 AKR1B15C9JRZ8 316 aaPredicted RBP19.93■□□□□ 0.78
SYNE3-204ENST00000555759 CHMLP26374 656 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 RUFY3Q7L099 469 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 NUTM2AQ8IVF1 878 aaPredicted RBP19.93■□□□□ 0.78
SYNE3-204ENST00000555759 LMBR1Q8WVP7 490 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 MYD88Q99836 296 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 CARD6Q9BX69 1037 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 TSGA10Q9BZW7 698 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 ZMYM4Q5VZL5 1548 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 RAD50Q92878 1312 aa19.93■□□□□ 0.78
SYNE3-204ENST00000555759 C16orf71Q8IYS4 520 aaPredicted RBP19.92■□□□□ 0.78
SYNE3-204ENST00000555759 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 GUCA1BQ9UMX6 200 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 VGLL3A8MV65 326 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 ATP2B2Q01814 1243 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 NAPGQ99747 312 aaPredicted RBP19.92■□□□□ 0.78
SYNE3-204ENST00000555759 EXOC1Q9NV70 894 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 ZNF76P36508 570 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 CCDC82Q8N4S0 544 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 MYCBPQ99417 103 aaPredicted RBP19.92■□□□□ 0.78
SYNE3-204ENST00000555759 CBX8Q9HC52 389 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 A0A1W2PRG0 241 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 MAP2K2P36507 400 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 CCDC42Q96M95 316 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 MICU3Q86XE3 530 aa19.92■□□□□ 0.78
SYNE3-204ENST00000555759 C17orf53Q8N3J3 647 aaPredicted RBP19.92■□□□□ 0.78
SYNE3-204ENST00000555759 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 CEP85Q6P2H3 762 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 WDHD1O75717 1129 aaPredicted RBP19.91■□□□□ 0.78
SYNE3-204ENST00000555759 ZFYP08048 801 aaPredicted RBP19.91■□□□□ 0.78
SYNE3-204ENST00000555759 TNNC1P63316 161 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 ANKRD18BA2A2Z9 1011 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 GOLGA6CA6NDK9 693 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 GOLGA6DP0CG33 693 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 IFT74Q96LB3 600 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 GOLGA6AQ9NYA3 693 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 ELP1O95163 1332 aa19.91■□□□□ 0.78
SYNE3-204ENST00000555759 IGHMBP2P38935 993 aaKnown RBP19.9■□□□□ 0.78
SYNE3-204ENST00000555759 GPR161Q8N6U8 529 aaKnown RBP19.9■□□□□ 0.78
SYNE3-204ENST00000555759 CLNS1AP54105 237 aaKnown RBP19.9■□□□□ 0.78
SYNE3-204ENST00000555759 TRIM14Q14142 442 aa19.9■□□□□ 0.78
SYNE3-204ENST00000555759 ARHGAP6O43182 974 aa19.9■□□□□ 0.78
SYNE3-204ENST00000555759 MCMDC2Q4G0Z9 681 aa19.9■□□□□ 0.78
SYNE3-204ENST00000555759 CAPZA3Q96KX2 299 aa19.9■□□□□ 0.78
SYNE3-204ENST00000555759 TMEM63CQ9P1W3 806 aa19.9■□□□□ 0.78
SYNE3-204ENST00000555759 ATF3P18847 181 aa19.89■□□□□ 0.78
SYNE3-204ENST00000555759 HSP90AA4PQ58FG1 418 aa19.89■□□□□ 0.78
SYNE3-204ENST00000555759 BRD3Q15059 726 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 TNNQ9UQP3 1299 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 AFMP43652 599 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 TMTC2Q8N394 836 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 ZBTB43O43298 467 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 SWAP70Q9UH65 585 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 CLGNO14967 610 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 NBPF7P0C2Y1 421 aaPredicted RBP19.89■□□□□ 0.77
SYNE3-204ENST00000555759 DAAM2Q86T65 1068 aa19.89■□□□□ 0.77
SYNE3-204ENST00000555759 LUC7L2Q9Y383 392 aaKnown RBP19.89■□□□□ 0.77
SYNE3-204ENST00000555759 MARCKSP29966 332 aaPredicted RBP19.88■□□□□ 0.77
SYNE3-204ENST00000555759 ESCO1Q5FWF5 840 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 CREB3L3Q68CJ9 461 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 IDEP14735 1019 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 WDR66Q8TBY9 1149 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 USP5P45974 858 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 LMNTD2Q8IXW0 634 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 TCEANC2Q96MN5 208 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 SELENOSQ9BQE4 189 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 STRN4Q9NRL3 753 aa19.88■□□□□ 0.77
SYNE3-204ENST00000555759 RANBP6O60518 1105 aaKnown RBP19.87■□□□□ 0.77
SYNE3-204ENST00000555759 SETDB1Q15047 1291 aa19.87■□□□□ 0.77
SYNE3-204ENST00000555759 PPFIBP2Q8ND30 876 aa19.87■□□□□ 0.77
SYNE3-204ENST00000555759 SPAG5Q96R06 1193 aa19.87■□□□□ 0.77
SYNE3-204ENST00000555759 STIM2Q9P246 746 aa19.87■□□□□ 0.77
SYNE3-204ENST00000555759 MAP3K9P80192 1104 aa19.87■□□□□ 0.77
SYNE3-204ENST00000555759 UBA5Q9GZZ9 404 aa19.87■□□□□ 0.77
SYNE3-204ENST00000555759 STAT6P42226 847 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 IFIT5Q13325 482 aaKnown RBP19.86■□□□□ 0.77
SYNE3-204ENST00000555759 NME9Q86XW9 330 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 FMNL3Q8IVF7 1028 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 HOMER2Q9NSB8 354 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 ABCF2Q9UG63 623 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 BRD1O95696 1058 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 PPFIA1Q13136 1202 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 MFSD6Q6ZSS7 791 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 KCNH5Q8NCM2 988 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 MAP3K2Q9Y2U5 619 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 IBTKQ9P2D0 1353 aaPredicted RBP19.86■□□□□ 0.77
SYNE3-204ENST00000555759 STXBP4Q6ZWJ1 553 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 GOLGA5Q8TBA6 731 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 BICDL2A1A5D9 508 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 CCDC122Q5T0U0 273 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 TCERG1LQ5VWI1 586 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 IKBKGQ9Y6K9 419 aa19.86■□□□□ 0.77
SYNE3-204ENST00000555759 ATP11AP98196 1134 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms