RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
TDP1-212ENST00000555565 COL4A1P02462 1669 aa14.1□□□□□ -0.15
TDP1-212ENST00000555565 RIMBP2O15034 1052 aa14.09□□□□□ -0.15
TDP1-212ENST00000555565 VIL1P09327 827 aaKnown RBP14.09□□□□□ -0.15
TDP1-212ENST00000555565 AIMP1Q12904 312 aaKnown RBP14.09□□□□□ -0.15
TDP1-212ENST00000555565 PKN2Q16513 984 aaKnown RBP14.09□□□□□ -0.15
TDP1-212ENST00000555565 COPS6Q7L5N1 327 aa14.09□□□□□ -0.15
TDP1-212ENST00000555565 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
TDP1-212ENST00000555565 XAGE3Q8WTP9 111 aa14.09□□□□□ -0.15
TDP1-212ENST00000555565 CELF1Q92879 486 aaKnown RBP14.09□□□□□ -0.15
TDP1-212ENST00000555565 NSFL1CQ9UNZ2 370 aaKnown RBP14.09□□□□□ -0.15
TDP1-212ENST00000555565 ECE2O60344 883 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 GPSM2P81274 684 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 TCIRG1Q13488 830 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 DOK7Q18PE1 504 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 GGA3Q9NZ52 723 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 TRMT112Q9UI30 125 aaKnown RBP14.08□□□□□ -0.16
TDP1-212ENST00000555565 SH3TC1Q8TE82 1336 aa14.08□□□□□ -0.16
TDP1-212ENST00000555565 TBC1D8O95759 1140 aa14.07□□□□□ -0.16
TDP1-212ENST00000555565 ZNF280AP59817 542 aaPredicted RBP14.07□□□□□ -0.16
TDP1-212ENST00000555565 SF3B3Q15393 1217 aaKnown RBP14.07□□□□□ -0.16
TDP1-212ENST00000555565 SULF1Q8IWU6 871 aa14.07□□□□□ -0.16
TDP1-212ENST00000555565 CHPF2Q9P2E5 772 aa14.07□□□□□ -0.16
TDP1-212ENST00000555565 APAF1O14727 1248 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 HOXB7P09629 217 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 TM4SF4P48230 202 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 HSP90AB3PQ58FF7 597 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 NOM1Q5C9Z4 860 aaKnown RBP14.06□□□□□ -0.16
TDP1-212ENST00000555565 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 MOB2Q70IA6 237 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 TBC1D16Q8TBP0 767 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 ZNF428Q96B54 188 aa14.06□□□□□ -0.16
TDP1-212ENST00000555565 SCN9AQ15858 1988 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 HTTP42858 3142 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 C6orf229H3BNL8 230 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 FKBP1BP68106 108 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 SCARF1Q14162 830 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
TDP1-212ENST00000555565 ANGEL2Q5VTE6 544 aaKnown RBP14.05□□□□□ -0.16
TDP1-212ENST00000555565 DUSP27Q5VZP5 1158 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 GMLQ99445 158 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 R3HDMLQ9H3Y0 253 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
TDP1-212ENST00000555565 BRCA2P51587 3418 aa14.04□□□□□ -0.16
TDP1-212ENST00000555565 GPR25O00155 361 aa14.04□□□□□ -0.16
TDP1-212ENST00000555565 FBXO46Q6PJ61 603 aaPredicted RBP14.04□□□□□ -0.16
TDP1-212ENST00000555565 DBF4Q9UBU7 674 aaPredicted RBP14.04□□□□□ -0.16
TDP1-212ENST00000555565 HDAC9Q9UKV0 1011 aa14.04□□□□□ -0.16
TDP1-212ENST00000555565 ZNF609O15014 1411 aa14.04□□□□□ -0.16
TDP1-212ENST00000555565 UBE2Q2LH0YL09 131 aa14.03□□□□□ -0.16
TDP1-212ENST00000555565 PLBD2Q8NHP8 589 aa14.03□□□□□ -0.16
TDP1-212ENST00000555565 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
TDP1-212ENST00000555565 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
TDP1-212ENST00000555565 CFHR5Q9BXR6 569 aa14.03□□□□□ -0.16
TDP1-212ENST00000555565 PODXL2Q9NZ53 605 aa14.03□□□□□ -0.16
TDP1-212ENST00000555565 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
TDP1-212ENST00000555565 DDX60Q8IY21 1712 aaKnown RBP14.03□□□□□ -0.16
TDP1-212ENST00000555565 CCDC184Q52MB2 194 aa14.02□□□□□ -0.17
TDP1-212ENST00000555565 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.17
TDP1-212ENST00000555565 EYA3Q99504 573 aa14.02□□□□□ -0.17
TDP1-212ENST00000555565 ISCA1Q9BUE6 129 aa14.02□□□□□ -0.17
TDP1-212ENST00000555565 IFT57Q9NWB7 429 aa14.02□□□□□ -0.17
TDP1-212ENST00000555565 CENPFP49454 3210 aa14.02□□□□□ -0.17
TDP1-212ENST00000555565 PAPPA2Q9BXP8 1791 aa14.01□□□□□ -0.17
TDP1-212ENST00000555565 PITPNM2Q9BZ72 1349 aa14.01□□□□□ -0.17
TDP1-212ENST00000555565 RPS8P62241 208 aaKnown RBP14.01□□□□□ -0.17
TDP1-212ENST00000555565 PRAMEF18Q5VWM3 479 aa14.01□□□□□ -0.17
TDP1-212ENST00000555565 RSBN1LQ6PCB5 846 aaPredicted RBP14.01□□□□□ -0.17
TDP1-212ENST00000555565 AGBL3Q8NEM8 1001 aa14.01□□□□□ -0.17
TDP1-212ENST00000555565 ZC3H12CQ9C0D7 883 aaKnown RBP14.01□□□□□ -0.17
TDP1-212ENST00000555565 HYPKQ9NX55 129 aa14.01□□□□□ -0.17
TDP1-212ENST00000555565 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
TDP1-212ENST00000555565 GNAI1P63096 354 aa14□□□□□ -0.17
TDP1-212ENST00000555565 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
TDP1-212ENST00000555565 MYOZ2Q9NPC6 264 aa14□□□□□ -0.17
TDP1-212ENST00000555565 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
TDP1-212ENST00000555565 ATP5J2-PTCD1G3V325 749 aa13.99□□□□□ -0.17
TDP1-212ENST00000555565 FKTNO75072 461 aa13.98□□□□□ -0.17
TDP1-212ENST00000555565 USP17L8P0C7I0 530 aa13.98□□□□□ -0.17
TDP1-212ENST00000555565 FXR1P51114 621 aaKnown RBP eCLIP13.98□□□□□ -0.17
TDP1-212ENST00000555565 TRIM28Q13263 835 aaKnown RBP13.98□□□□□ -0.17
TDP1-212ENST00000555565 NBPF9Q3BBW0 867 aa13.98□□□□□ -0.17
TDP1-212ENST00000555565 C8orf58Q8NAV2 365 aa13.98□□□□□ -0.17
TDP1-212ENST00000555565 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
TDP1-212ENST00000555565 SEC31BQ9NQW1 1179 aa13.98□□□□□ -0.17
TDP1-212ENST00000555565 WTIPA6NIX2 430 aaPredicted RBP13.97□□□□□ -0.17
TDP1-212ENST00000555565 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
TDP1-212ENST00000555565 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
TDP1-212ENST00000555565 SZT2Q5T011 3432 aa13.97□□□□□ -0.17
TDP1-212ENST00000555565 IRS4O14654 1257 aaPredicted RBP13.96□□□□□ -0.17
TDP1-212ENST00000555565 UFL1O94874 794 aa13.96□□□□□ -0.17
TDP1-212ENST00000555565 ZEB1P37275 1124 aaPredicted RBP13.96□□□□□ -0.17
TDP1-212ENST00000555565 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
TDP1-212ENST00000555565 RIC3Q7Z5B4 369 aa13.96□□□□□ -0.17
TDP1-212ENST00000555565 GOLGA2Q08379 1002 aa13.95□□□□□ -0.18
TDP1-212ENST00000555565 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
TDP1-212ENST00000555565 TSPYL6Q8N831 410 aa13.95□□□□□ -0.18
TDP1-212ENST00000555565 GGA1Q9UJY5 639 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms