RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 NT5C1AQ9BXI3 368 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 EHD4Q9H223 541 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 NACADO15069 1562 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 MINDY4BA8MYZ0 360 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 J3QL48 77 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 KLF4O43474 513 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 EDN3P14138 238 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 ETFBP38117 255 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
PAX3-210ENST00000555548 TRIM56Q9BRZ2 755 aaKnown RBP9.66□□□□□ -0.86
PAX3-210ENST00000555548 CHMP4AQ9BY43 222 aa9.66□□□□□ -0.86
PAX3-210ENST00000555548 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
PAX3-210ENST00000555548 ENPP3O14638 875 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 MSX1P28360 303 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
PAX3-210ENST00000555548 FCGRTP55899 365 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 ANKS3Q6ZW76 656 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 KCNB2Q92953 911 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 CEP63Q96MT8 703 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 BRINP2Q9C0B6 783 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 LATS2Q9NRM7 1088 aa9.65□□□□□ -0.86
PAX3-210ENST00000555548 A0A1B0GTH6 734 aa9.64□□□□□ -0.87
PAX3-210ENST00000555548 A0A1W2PNR3 127 aa9.64□□□□□ -0.87
PAX3-210ENST00000555548 RAB33AQ14088 237 aa9.64□□□□□ -0.87
PAX3-210ENST00000555548 PEAR1Q5VY43 1037 aaPredicted RBP9.64□□□□□ -0.87
PAX3-210ENST00000555548 RHOVQ96L33 236 aa9.64□□□□□ -0.87
PAX3-210ENST00000555548 OXCT2Q9BYC2 517 aaPredicted RBP9.64□□□□□ -0.87
PAX3-210ENST00000555548 CWC22Q9HCG8 908 aaKnown RBP9.64□□□□□ -0.87
PAX3-210ENST00000555548 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
PAX3-210ENST00000555548 F6X3S4 739 aa9.63□□□□□ -0.87
PAX3-210ENST00000555548 PHC3Q8NDX5 983 aa9.63□□□□□ -0.87
PAX3-210ENST00000555548 SRPK1Q96SB4 655 aaKnown RBP9.63□□□□□ -0.87
PAX3-210ENST00000555548 TRIM55Q9BYV6 548 aa9.63□□□□□ -0.87
PAX3-210ENST00000555548 MRVI1Q9Y6F6 885 aa9.63□□□□□ -0.87
PAX3-210ENST00000555548 TTC24A2A3L6 582 aaPredicted RBP9.62□□□□□ -0.87
PAX3-210ENST00000555548 GREM1O60565 184 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
PAX3-210ENST00000555548 GARTP22102 1010 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 IGBP1P78318 339 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 FBXL19Q6PCT2 694 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 PRICKLE2Q7Z3G6 844 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 RNPC3Q96LT9 517 aaKnown RBP9.62□□□□□ -0.87
PAX3-210ENST00000555548 ABCB6Q9NP58 842 aa9.62□□□□□ -0.87
PAX3-210ENST00000555548 SUPT16HQ9Y5B9 1047 aaKnown RBP9.62□□□□□ -0.87
PAX3-210ENST00000555548 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
PAX3-210ENST00000555548 RNF187Q5TA31 235 aaPredicted RBP9.61□□□□□ -0.87
PAX3-210ENST00000555548 LYSMD3Q7Z3D4 306 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 TIMMDC1Q9NPL8 285 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 PRKAG3Q9UGI9 489 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 SALL4Q9UJQ4 1053 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 AKAP2Q9Y2D5 859 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 GJA3Q9Y6H8 435 aa9.61□□□□□ -0.87
PAX3-210ENST00000555548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.61□□□□□ -0.87
PAX3-210ENST00000555548 RAB11FIP3O75154 756 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 SMPD1P17405 629 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 IBSPP21815 317 aaPredicted RBP9.6□□□□□ -0.87
PAX3-210ENST00000555548 MAP3K11Q16584 847 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 SAMD5Q5TGI4 173 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 PCNX4Q63HM2 1172 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 DTHD1Q6ZMT9 781 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 CDAN1Q8IWY9 1227 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 CYP4X1Q8N118 509 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 OR13H1Q8NG92 308 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
PAX3-210ENST00000555548 DEPDC7Q96QD5 511 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 TCF12Q99081 682 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 CRISPLD1Q9H336 500 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 LIN7BQ9HAP6 207 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
PAX3-210ENST00000555548 UPP2O95045 317 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 LIG3P49916 1009 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 KCNQ4P56696 695 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 RASA3Q14644 834 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 CPLX3Q8WVH0 158 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 HNRNPLLQ8WVV9 542 aaKnown RBP9.59□□□□□ -0.87
PAX3-210ENST00000555548 ZFYVE1Q9HBF4 777 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 KANSL3Q9P2N6 904 aa9.59□□□□□ -0.87
PAX3-210ENST00000555548 FBXO24O75426 580 aa9.58□□□□□ -0.88
PAX3-210ENST00000555548 PF4P02776 101 aa9.58□□□□□ -0.88
PAX3-210ENST00000555548 LMNB2Q03252 620 aa9.58□□□□□ -0.88
PAX3-210ENST00000555548 PLEKHG4Q58EX7 1191 aa9.58□□□□□ -0.88
PAX3-210ENST00000555548 CCNJLQ8IV13 435 aa9.58□□□□□ -0.88
PAX3-210ENST00000555548 ZCCHC2Q9C0B9 1178 aaKnown RBP9.58□□□□□ -0.88
PAX3-210ENST00000555548 CEP44Q9C0F1 390 aa9.58□□□□□ -0.88
PAX3-210ENST00000555548 NOP58Q9Y2X3 529 aaKnown RBP9.58□□□□□ -0.88
PAX3-210ENST00000555548 PHF20L1A8MW92 1017 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 SASH3O75995 380 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 FAM160A1Q05DH4 1040 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 CAMK2GQ13555 558 aaPredicted RBP9.57□□□□□ -0.88
PAX3-210ENST00000555548 SNAP47Q5SQN1 464 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms