RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZSCAN23Q3MJ62 389 aa29.02■■■□□ 2.24
TMEM260-207ENST00000555497 TTLL11Q8NHH1 800 aa29.02■■■□□ 2.24
TMEM260-207ENST00000555497 TOB2Q14106 344 aaPredicted RBP29.02■■■□□ 2.24
TMEM260-207ENST00000555497 HSP90AB3PQ58FF7 597 aa29.02■■■□□ 2.24
TMEM260-207ENST00000555497 STX6O43752 255 aa29.01■■■□□ 2.24
TMEM260-207ENST00000555497 GJB2P29033 226 aa29.01■■■□□ 2.24
TMEM260-207ENST00000555497 DDB1Q16531 1140 aa29.01■■■□□ 2.24
TMEM260-207ENST00000555497 GREM2Q9H772 168 aa29.01■■■□□ 2.24
TMEM260-207ENST00000555497 ZSCAN22P10073 491 aaPredicted RBP29.01■■■□□ 2.23
TMEM260-207ENST00000555497 TAF7LQ5H9L4 462 aa29.01■■■□□ 2.23
TMEM260-207ENST00000555497 DZIP3Q86Y13 1208 aaKnown RBP29.01■■■□□ 2.23
TMEM260-207ENST00000555497 ACSBG1Q96GR2 724 aa29.01■■■□□ 2.23
TMEM260-207ENST00000555497 XAGE2Q96GT9 111 aa29.01■■■□□ 2.23
TMEM260-207ENST00000555497 U3KPZ7 1027 aaPredicted RBP29.01■■■□□ 2.23
TMEM260-207ENST00000555497 IL6STP40189 918 aaPredicted RBP29■■■□□ 2.23
TMEM260-207ENST00000555497 ZMYM1Q5SVZ6 1142 aa29■■■□□ 2.23
TMEM260-207ENST00000555497 MARCH10Q8NA82 808 aaPredicted RBP29■■■□□ 2.23
TMEM260-207ENST00000555497 CDCA7Q9BWT1 371 aaPredicted RBP29■■■□□ 2.23
TMEM260-207ENST00000555497 ALDH8A1Q9H2A2 487 aaPredicted RBP29■■■□□ 2.23
TMEM260-207ENST00000555497 GDPD2Q9HCC8 539 aa29■■■□□ 2.23
TMEM260-207ENST00000555497 CYP21A2P08686 494 aa29■■■□□ 2.23
TMEM260-207ENST00000555497 ZNF445P59923 1031 aa29■■■□□ 2.23
TMEM260-207ENST00000555497 NUTM2BA6NNL0 878 aaPredicted RBP28.99■■■□□ 2.23
TMEM260-207ENST00000555497 NUTM2EB1AL46 878 aaPredicted RBP28.99■■■□□ 2.23
TMEM260-207ENST00000555497 NUTM2AQ8IVF1 878 aaPredicted RBP28.99■■■□□ 2.23
TMEM260-207ENST00000555497 HELLSQ9NRZ9 838 aa28.99■■■□□ 2.23
TMEM260-207ENST00000555497 THRAP3Q9Y2W1 955 aaKnown RBP28.99■■■□□ 2.23
TMEM260-207ENST00000555497 RIPOR2Q9Y4F9 1068 aa28.99■■■□□ 2.23
TMEM260-207ENST00000555497 UBN2Q6ZU65 1347 aa28.99■■■□□ 2.23
TMEM260-207ENST00000555497 MYH3P11055 1940 aa28.99■■■□□ 2.23
TMEM260-207ENST00000555497 ITGA6P23229 1130 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 CTSWP56202 376 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.98■■■□□ 2.23
TMEM260-207ENST00000555497 TMEM63CQ9P1W3 806 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 TRMT112Q9UI30 125 aaKnown RBP28.98■■■□□ 2.23
TMEM260-207ENST00000555497 AKAP2Q9Y2D5 859 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 RIC1Q4ADV7 1423 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 A0A0G2JS52 829 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 ERVV-1B6SEH8 477 aa28.98■■■□□ 2.23
TMEM260-207ENST00000555497 IRS4O14654 1257 aaPredicted RBP28.98■■■□□ 2.23
TMEM260-207ENST00000555497 SCARF1Q14162 830 aa28.97■■■□□ 2.23
TMEM260-207ENST00000555497 INTS5Q6P9B9 1019 aaKnown RBP28.97■■■□□ 2.23
TMEM260-207ENST00000555497 SPEF2Q9C093 1822 aa28.97■■■□□ 2.23
TMEM260-207ENST00000555497 SLIT2O94813 1529 aa28.97■■■□□ 2.23
TMEM260-207ENST00000555497 FKBP4Q02790 459 aaKnown RBP eCLIP28.96■■■□□ 2.23
TMEM260-207ENST00000555497 KRT32Q14532 448 aa28.96■■■□□ 2.23
TMEM260-207ENST00000555497 ZNF34Q8IZ26 560 aa28.96■■■□□ 2.23
TMEM260-207ENST00000555497 RNF113AO15541 343 aaKnown RBP28.96■■■□□ 2.23
TMEM260-207ENST00000555497 CCDC158Q5M9N0 1113 aa28.96■■■□□ 2.23
TMEM260-207ENST00000555497 TTC39AQ5SRH9 613 aa28.96■■■□□ 2.23
TMEM260-207ENST00000555497 NEK1Q96PY6 1258 aa28.96■■■□□ 2.23
TMEM260-207ENST00000555497 SPATA31A5Q5VU36 1347 aa28.95■■■□□ 2.23
TMEM260-207ENST00000555497 SPATA31A7Q8IWB4 1347 aa28.95■■■□□ 2.23
TMEM260-207ENST00000555497 GADD45BO75293 160 aaPredicted RBP28.95■■■□□ 2.22
TMEM260-207ENST00000555497 EIF5P55010 431 aaKnown RBP28.95■■■□□ 2.22
TMEM260-207ENST00000555497 ANKRD1Q15327 319 aa28.95■■■□□ 2.22
TMEM260-207ENST00000555497 GORABQ5T7V8 394 aa28.95■■■□□ 2.22
TMEM260-207ENST00000555497 STOX1Q6ZVD7 989 aa28.95■■■□□ 2.22
TMEM260-207ENST00000555497 USP48Q86UV5 1035 aa28.95■■■□□ 2.22
TMEM260-207ENST00000555497 MTMR6Q9Y217 621 aa28.95■■■□□ 2.22
TMEM260-207ENST00000555497 MAST3O60307 1309 aa28.95■■■□□ 2.22
TMEM260-207ENST00000555497 F13A1P00488 732 aa28.94■■■□□ 2.22
TMEM260-207ENST00000555497 LDHAL6AQ6ZMR3 332 aa28.94■■■□□ 2.22
TMEM260-207ENST00000555497 TICAM2Q86XR7 235 aa28.94■■■□□ 2.22
TMEM260-207ENST00000555497 A0A0G2JLW4 131 aa28.94■■■□□ 2.22
TMEM260-207ENST00000555497 ANKRD18BA2A2Z9 1011 aa28.93■■■□□ 2.22
TMEM260-207ENST00000555497 M0R2C6 588 aa28.93■■■□□ 2.22
TMEM260-207ENST00000555497 METTL24Q5JXM2 366 aa28.93■■■□□ 2.22
TMEM260-207ENST00000555497 DSCC1Q9BVC3 393 aa28.93■■■□□ 2.22
TMEM260-207ENST00000555497 CNPY2Q9Y2B0 182 aa28.93■■■□□ 2.22
TMEM260-207ENST00000555497 MBD3O95983 291 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 ATP6V1AP38606 617 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 OSBP2Q969R2 916 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 CCDC87Q9NVE4 849 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 LAMA4Q16363 1823 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 PDE8AO60658 829 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 HSPD1P10809 573 aaKnown RBP28.92■■■□□ 2.22
TMEM260-207ENST00000555497 CRKLP46109 303 aaKnown RBP28.92■■■□□ 2.22
TMEM260-207ENST00000555497 ITPK1Q13572 414 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 ATP2B3Q16720 1220 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 PI16Q6UXB8 463 aa28.92■■■□□ 2.22
TMEM260-207ENST00000555497 VGLL2Q8N8G2 317 aa28.91■■■□□ 2.22
TMEM260-207ENST00000555497 MYH14Q7Z406 1995 aaKnown RBP28.91■■■□□ 2.22
TMEM260-207ENST00000555497 LOC102724428A0A0B4J2F2 783 aa28.9■■■□□ 2.22
TMEM260-207ENST00000555497 ZAP70P43403 619 aa28.9■■■□□ 2.22
TMEM260-207ENST00000555497 SIK1P57059 783 aa28.9■■■□□ 2.22
TMEM260-207ENST00000555497 PIP4K2BP78356 416 aa28.9■■■□□ 2.22
TMEM260-207ENST00000555497 STK3Q13188 491 aa28.9■■■□□ 2.22
TMEM260-207ENST00000555497 TMEM87AQ8NBN3 555 aa28.89■■■□□ 2.22
TMEM260-207ENST00000555497 CNNM1Q9NRU3 951 aa28.89■■■□□ 2.22
TMEM260-207ENST00000555497 SUSD4Q5VX71 490 aa28.89■■■□□ 2.21
TMEM260-207ENST00000555497 Q6ZUG5 572 aa28.89■■■□□ 2.21
TMEM260-207ENST00000555497 AKAP11Q9UKA4 1901 aa28.88■■■□□ 2.21
TMEM260-207ENST00000555497 LRRC2Q9BYS8 371 aa28.88■■■□□ 2.21
TMEM260-207ENST00000555497 BARGINQ6ZT62 677 aa28.87■■■□□ 2.21
TMEM260-207ENST00000555497 SYCE3A1L190 88 aa28.86■■■□□ 2.21
TMEM260-207ENST00000555497 VPS37CA5D8V6 355 aaPredicted RBP28.86■■■□□ 2.21
TMEM260-207ENST00000555497 FOXP2O15409 715 aa28.86■■■□□ 2.21
TMEM260-207ENST00000555497 KCNQ2O43526 872 aa28.86■■■□□ 2.21
TMEM260-207ENST00000555497 HCLS1P14317 486 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms