RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 NLRP3Q96P20 1036 aa10.71□□□□□ -0.69
TRIM9-204ENST00000555170 DUOX1Q9NRD9 1551 aa10.71□□□□□ -0.69
TRIM9-204ENST00000555170 COL4A5P29400 1685 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 CDHR2Q9BYE9 1310 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
TRIM9-204ENST00000555170 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 ALDH1L2Q3SY69 923 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 HABP4Q5JVS0 413 aaKnown RBP10.7□□□□□ -0.7
TRIM9-204ENST00000555170 BEND3Q5T5X7 828 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 USP50Q70EL3 339 aaPredicted RBP10.7□□□□□ -0.7
TRIM9-204ENST00000555170 RTKN2Q8IZC4 609 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 HHIPL1Q96JK4 782 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 SMC4Q9NTJ3 1288 aa10.7□□□□□ -0.7
TRIM9-204ENST00000555170 PPEF1O14829 653 aaPredicted RBP10.69□□□□□ -0.7
TRIM9-204ENST00000555170 CT47B1P0C2W7 299 aaPredicted RBP10.69□□□□□ -0.7
TRIM9-204ENST00000555170 CASP7P55210 303 aa10.69□□□□□ -0.7
TRIM9-204ENST00000555170 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
TRIM9-204ENST00000555170 GCKRQ14397 625 aa10.69□□□□□ -0.7
TRIM9-204ENST00000555170 LINS1Q8NG48 757 aa10.69□□□□□ -0.7
TRIM9-204ENST00000555170 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
TRIM9-204ENST00000555170 GCC1Q96CN9 775 aa10.69□□□□□ -0.7
TRIM9-204ENST00000555170 RBM17Q96I25 401 aaKnown RBP10.69□□□□□ -0.7
TRIM9-204ENST00000555170 CRAMP1Q96RY5 1269 aa10.69□□□□□ -0.7
TRIM9-204ENST00000555170 TRPM7Q96QT4 1865 aa10.68□□□□□ -0.7
TRIM9-204ENST00000555170 PTPRCP08575 1304 aa10.68□□□□□ -0.7
TRIM9-204ENST00000555170 H7C1W4 665 aa10.68□□□□□ -0.7
TRIM9-204ENST00000555170 ALDH1B1P30837 517 aa10.68□□□□□ -0.7
TRIM9-204ENST00000555170 RARSP54136 660 aaKnown RBP10.68□□□□□ -0.7
TRIM9-204ENST00000555170 SF3B3Q15393 1217 aaKnown RBP10.68□□□□□ -0.7
TRIM9-204ENST00000555170 SLC4A10Q6U841 1118 aa10.68□□□□□ -0.7
TRIM9-204ENST00000555170 UBE3BQ7Z3V4 1068 aa10.68□□□□□ -0.7
TRIM9-204ENST00000555170 GLIS2Q9BZE0 524 aaPredicted RBP10.68□□□□□ -0.7
TRIM9-204ENST00000555170 PDE8AO60658 829 aa10.67□□□□□ -0.7
TRIM9-204ENST00000555170 NOGQ13253 232 aa10.67□□□□□ -0.7
TRIM9-204ENST00000555170 GRAPQ13588 217 aa10.67□□□□□ -0.7
TRIM9-204ENST00000555170 GRAPLQ8TC17 118 aaPredicted RBP10.67□□□□□ -0.7
TRIM9-204ENST00000555170 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
TRIM9-204ENST00000555170 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
TRIM9-204ENST00000555170 ZNF408Q9H9D4 720 aa10.67□□□□□ -0.7
TRIM9-204ENST00000555170 SEC31BQ9NQW1 1179 aa10.67□□□□□ -0.7
TRIM9-204ENST00000555170 TRPA1O75762 1119 aa10.66□□□□□ -0.7
TRIM9-204ENST00000555170 CTSWP56202 376 aa10.66□□□□□ -0.7
TRIM9-204ENST00000555170 DDX46Q7L014 1031 aaKnown RBP10.66□□□□□ -0.7
TRIM9-204ENST00000555170 NOB1Q9ULX3 412 aaKnown RBP10.66□□□□□ -0.7
TRIM9-204ENST00000555170 HPS5Q9UPZ3 1129 aa10.66□□□□□ -0.7
TRIM9-204ENST00000555170 TNNQ9UQP3 1299 aa10.66□□□□□ -0.7
TRIM9-204ENST00000555170 BCAR3O75815 825 aa10.65□□□□□ -0.7
TRIM9-204ENST00000555170 TTLL11Q8NHH1 800 aa10.65□□□□□ -0.7
TRIM9-204ENST00000555170 PSMD1Q99460 953 aa10.65□□□□□ -0.7
TRIM9-204ENST00000555170 SRCIN1Q9C0H9 1055 aa10.65□□□□□ -0.7
TRIM9-204ENST00000555170 RNF186Q9NXI6 227 aa10.65□□□□□ -0.7
TRIM9-204ENST00000555170 ATP6V0A2Q9Y487 856 aa10.65□□□□□ -0.7
TRIM9-204ENST00000555170 RTL9Q8NET4 1388 aa10.65□□□□□ -0.71
TRIM9-204ENST00000555170 KIF16BQ96L93 1317 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 FAM155AB1AL88 458 aaPredicted RBP10.64□□□□□ -0.71
TRIM9-204ENST00000555170 GRM8O00222 908 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 ALDH1L1O75891 902 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 HUNKP57058 714 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 KIF23Q02241 960 aaPredicted RBP10.64□□□□□ -0.71
TRIM9-204ENST00000555170 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 EPHA10Q5JZY3 1008 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 DLK2Q6UY11 383 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 CTU1Q7Z7A3 348 aaKnown RBP10.64□□□□□ -0.71
TRIM9-204ENST00000555170 PLA2G12BQ9BX93 195 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 GREM2Q9H772 168 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 ADARB2Q9NS39 739 aaKnown RBP10.64□□□□□ -0.71
TRIM9-204ENST00000555170 SAGE1Q9NXZ1 904 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 PGAP2Q9UHJ9 254 aa10.64□□□□□ -0.71
TRIM9-204ENST00000555170 BBOX1O75936 387 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 NBPF7P0C2Y1 421 aaPredicted RBP10.63□□□□□ -0.71
TRIM9-204ENST00000555170 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM9-204ENST00000555170 FOXO4P98177 505 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 SP8Q8IXZ3 490 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 LARGE2Q8N3Y3 721 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 KAZALD1Q96I82 304 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 SUCLG2Q96I99 432 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 GPRC5DQ9NZD1 345 aa10.63□□□□□ -0.71
TRIM9-204ENST00000555170 ZNF646O15015 1829 aaPredicted RBP10.63□□□□□ -0.71
TRIM9-204ENST00000555170 UTYO14607 1347 aa10.62□□□□□ -0.71
TRIM9-204ENST00000555170 CSF1RP07333 972 aa10.62□□□□□ -0.71
TRIM9-204ENST00000555170 HSP90B1P14625 803 aaKnown RBP10.62□□□□□ -0.71
TRIM9-204ENST00000555170 HIRAP54198 1017 aaPredicted RBP10.62□□□□□ -0.71
TRIM9-204ENST00000555170 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
TRIM9-204ENST00000555170 PSME4Q14997 1843 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 TRIM27P14373 513 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 RPS8P62241 208 aaKnown RBP10.61□□□□□ -0.71
TRIM9-204ENST00000555170 GPSM2P81274 684 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 RGMBQ6NW40 437 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 USP48Q86UV5 1035 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 CSRNP1Q96S65 589 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 API5Q9BZZ5 524 aaKnown RBP10.61□□□□□ -0.71
TRIM9-204ENST00000555170 C9orf78Q9NZ63 289 aaPredicted RBP10.61□□□□□ -0.71
TRIM9-204ENST00000555170 SCN9AQ15858 1988 aa10.61□□□□□ -0.71
TRIM9-204ENST00000555170 DLL1O00548 723 aa10.6□□□□□ -0.71
TRIM9-204ENST00000555170 ITGA6P23229 1130 aa10.6□□□□□ -0.71
TRIM9-204ENST00000555170 AOC3Q16853 763 aa10.6□□□□□ -0.71
TRIM9-204ENST00000555170 LMBR1LQ6UX01 489 aa10.6□□□□□ -0.71
TRIM9-204ENST00000555170 DPP8Q6V1X1 898 aaPredicted RBP10.6□□□□□ -0.71
TRIM9-204ENST00000555170 TMC4Q7Z404 712 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms