RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 ATP4AP20648 1035 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 IDH3AP50213 366 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 EFCAB2Q5VUJ9 269 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 TRIM67Q6ZTA4 783 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 NT5DC4Q86YG4 428 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 LINC00528Q8N1L1 170 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
PPP4R3A-204ENST00000554574 NEUROD1Q13562 356 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 IER5Q5VY09 327 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 DIEXFQ68CQ4 756 aaKnown RBP6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 PIK3R5Q8WYR1 880 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 DRC1Q96MC2 740 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 FAM13BQ9NYF5 915 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 PLA2G2EQ9NZK7 142 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 TONSLQ96HA7 1378 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 FANCAO15360 1455 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 DUOX2Q9NRD8 1548 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 CTSHP09668 335 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 POU4F2Q12837 409 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 TRIP4Q15650 581 aaPredicted RBP6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 HIF1AQ16665 826 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 TTC16Q8NEE8 873 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 FOXD3Q9UJU5 478 aaPredicted RBP6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 INO80Q9ULG1 1556 aaPredicted RBP6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 RIMBP3CA6NJZ7 1639 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 RIMBP3BA6NNM3 1639 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 RIMBP3Q9UFD9 1639 aa6.62□□□□□ -1.35
PPP4R3A-204ENST00000554574 ANKRD30BQ9BXX2 1392 aa6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 RPRD2Q5VT52 1461 aaKnown RBP6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 IQGAP3Q86VI3 1631 aa6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 RPLP1P05386 114 aaKnown RBP6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 NBPF10Q6P3W6 841 aaKnown RBP6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 RNF217Q8TC41 542 aa6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 METTL5Q9NRN9 209 aaKnown RBP6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 AK5Q9Y6K8 562 aa6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 ZFYVE16Q7Z3T8 1539 aa6.61□□□□□ -1.35
PPP4R3A-204ENST00000554574 INPP5BP32019 993 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 ZNF76P36508 570 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 PI16Q6UXB8 463 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 BICDL1Q6ZP65 573 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 PRICKLE2Q7Z3G6 844 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 RNF34Q969K3 372 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 GPC6Q9Y625 555 aaPredicted RBP6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 RTEL1-TNFRSF6BF6WH68 1400 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 CAPN5O15484 640 aaPredicted RBP6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 TNFRSF21O75509 655 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 NEFLP07196 543 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 ARSDP51689 593 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 BTLAQ7Z6A9 289 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 CRELD1Q96HD1 420 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 ERBINQ96RT1 1412 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 MAGI2Q86UL8 1455 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 FAM135AQ9P2D6 1515 aa6.6□□□□□ -1.35
PPP4R3A-204ENST00000554574 DEPDC5O75140 1603 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 GRNP28799 593 aaKnown RBP6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 IRS1P35568 1242 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 PRR20EP86478 221 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 PRR20CP86479 221 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 PRR20DP86480 221 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 PRR20BP86481 221 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 PRR20AP86496 221 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 C6orf118Q5T5N4 469 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 LRRC69Q6ZNQ3 347 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 KCNMB2Q9Y691 235 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 TRAPPC8Q9Y2L5 1435 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 ATP7AQ04656 1500 aa6.59□□□□□ -1.35
PPP4R3A-204ENST00000554574 EIF2AK4Q9P2K8 1649 aaKnown RBP6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 MAP3K4Q9Y6R4 1608 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 ADGRL1O94910 1474 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 TEX14Q8IWB6 1497 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 NUP155O75694 1391 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 UPP2O95045 317 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 RHOQP17081 205 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 CMTR1Q8N1G2 835 aaKnown RBP6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 EPS8L3Q8TE67 593 aaKnown RBP6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 TINF2Q9BSI4 451 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 ANKIB1Q9P2G1 1089 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 PPP1R1BQ9UD71 204 aaPredicted RBP6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 SPG7Q9UQ90 795 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 KIDINS220Q9ULH0 1771 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 UBAP1LF5GYI3 381 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 BMP2P12643 396 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 ARSJQ5FYB0 599 aaPredicted RBP6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 LYSMD3Q7Z3D4 306 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 ZNF438Q7Z4V0 828 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 SNX29Q8TEQ0 813 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 CCDC74AQ96AQ1 378 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 FRMD6Q96NE9 622 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 TGIF2Q9GZN2 237 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 TMEM63CQ9P1W3 806 aa6.58□□□□□ -1.36
PPP4R3A-204ENST00000554574 EIF4BP23588 611 aaKnown RBP6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 MSX1P28360 303 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms