RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 TMEM165Q9HC07 324 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 CCDC181Q5TID7 509 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 ARMCX5Q6P1M9 558 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 TMC6Q7Z403 805 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 KIAA1328Q86T90 577 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 MYLK4Q86YV6 388 aaPredicted RBP12.99□□□□□ -0.33
NUMB-212ENST00000554546 EHD4Q9H223 541 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 WDR7Q9Y4E6 1490 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 A0A087WWV3 80 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 PYGBP11216 843 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 GNG11P61952 73 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 RINLQ6ZS11 566 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 LMBR1Q8WVP7 490 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
NUMB-212ENST00000554546 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
NUMB-212ENST00000554546 RPGRIP1LQ68CZ1 1315 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 ABCC5O15440 1437 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 SSBP05455 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
NUMB-212ENST00000554546 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
NUMB-212ENST00000554546 CC2D2BQ6DHV5 1058 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 FERMT3Q86UX7 667 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 TMTC2Q8N394 836 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 MAF1Q9H063 256 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 NAT10Q9H0A0 1025 aaKnown RBP12.98□□□□□ -0.33
NUMB-212ENST00000554546 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
NUMB-212ENST00000554546 TPD52L2O43399 206 aaKnown RBP12.97□□□□□ -0.33
NUMB-212ENST00000554546 CDR1P51861 262 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 BICD2Q8TD16 824 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 CLSTN2Q9H4D0 955 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 DDX19AQ9NUU7 478 aaKnown RBP12.97□□□□□ -0.33
NUMB-212ENST00000554546 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 MAGEA8P43361 318 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 CCDC150Q8NCX0 1101 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
NUMB-212ENST00000554546 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
NUMB-212ENST00000554546 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
NUMB-212ENST00000554546 RGS12O14924 1447 aa12.97□□□□□ -0.33
NUMB-212ENST00000554546 CDKL5O76039 1030 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 PDHBP11177 359 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 CDCA2Q69YH5 1023 aaPredicted RBP12.96□□□□□ -0.33
NUMB-212ENST00000554546 WDR24Q96S15 920 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 PNKPQ96T60 521 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 NR1I2O75469 434 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 OATP04181 439 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 KRT85P78386 507 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 NCAPG2Q86XI2 1143 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
NUMB-212ENST00000554546 LAMB3Q13751 1172 aa12.96□□□□□ -0.34
NUMB-212ENST00000554546 EZH1Q92800 747 aaPredicted RBP12.96□□□□□ -0.34
NUMB-212ENST00000554546 MSH6P52701 1360 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 NEFHP12036 1026 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
NUMB-212ENST00000554546 IRAK1P51617 712 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 IGSF22Q8N9C0 903 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 DHX58Q96C10 678 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 XAGE2Q96GT9 111 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 YIPF3Q9GZM5 350 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
NUMB-212ENST00000554546 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 SYNMO15061 1565 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 NUP155O75694 1391 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
NUMB-212ENST00000554546 CHMP4BP1P59074 171 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
NUMB-212ENST00000554546 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
NUMB-212ENST00000554546 RHOXF2BP0C7M4 288 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 B4GALNT2Q8NHY0 566 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
NUMB-212ENST00000554546 RHOXF2Q9BQY4 288 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
NUMB-212ENST00000554546 FSBPO95073 299 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 TSGA10Q9BZW7 698 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 RTEL1Q9NZ71 1219 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 RTN3O95197 1032 aaPredicted RBP12.94□□□□□ -0.34
NUMB-212ENST00000554546 CAVIN2O95810 425 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 TLDC1Q6P9B6 456 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
NUMB-212ENST00000554546 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
NUMB-212ENST00000554546 IMPACTQ9P2X3 320 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms