RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 CELF1Q92879 486 aaKnown RBP21.58■■□□□ 1.05
TUBB3-205ENST00000554336 PCNTO95613 3336 aa21.57■■□□□ 1.04
TUBB3-205ENST00000554336 POTEIP0CG38 1075 aa21.57■■□□□ 1.04
TUBB3-205ENST00000554336 POTEJP0CG39 1038 aa21.57■■□□□ 1.04
TUBB3-205ENST00000554336 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
TUBB3-205ENST00000554336 LTBP1Q14766 1721 aa21.57■■□□□ 1.04
TUBB3-205ENST00000554336 SNED1Q8TER0 1413 aa21.56■■□□□ 1.04
TUBB3-205ENST00000554336 ITGA6P23229 1130 aa21.56■■□□□ 1.04
TUBB3-205ENST00000554336 MTX1Q13505 466 aa21.56■■□□□ 1.04
TUBB3-205ENST00000554336 EXOC6Q8TAG9 804 aa21.55■■□□□ 1.04
TUBB3-205ENST00000554336 RBM17Q96I25 401 aaKnown RBP21.55■■□□□ 1.04
TUBB3-205ENST00000554336 ZNF277Q9NRM2 450 aaPredicted RBP21.55■■□□□ 1.04
TUBB3-205ENST00000554336 PNMA6EA0A0J9YXQ4 647 aa21.54■■□□□ 1.04
TUBB3-205ENST00000554336 RFX5P48382 616 aaPredicted RBP21.54■■□□□ 1.04
TUBB3-205ENST00000554336 FKBP4Q02790 459 aaKnown RBP eCLIP21.54■■□□□ 1.042e-6■■■■□ 22.8
TUBB3-205ENST00000554336 GRAPQ13588 217 aa21.54■■□□□ 1.04
TUBB3-205ENST00000554336 DDX46Q7L014 1031 aaKnown RBP21.54■■□□□ 1.04
TUBB3-205ENST00000554336 GRAPLQ8TC17 118 aaPredicted RBP21.54■■□□□ 1.04
TUBB3-205ENST00000554336 CHMP3Q9Y3E7 222 aa21.54■■□□□ 1.04
TUBB3-205ENST00000554336 SCN4AP35499 1836 aa21.54■■□□□ 1.04
TUBB3-205ENST00000554336 CEP85Q6P2H3 762 aa21.53■■□□□ 1.04
TUBB3-205ENST00000554336 KLHDC4Q8TBB5 520 aa21.53■■□□□ 1.04
TUBB3-205ENST00000554336 ZNF594Q96JF6 807 aaPredicted RBP21.53■■□□□ 1.04
TUBB3-205ENST00000554336 ZNF541Q9H0D2 1346 aa21.53■■□□□ 1.04
TUBB3-205ENST00000554336 DUOX1Q9NRD9 1551 aa21.53■■□□□ 1.04
TUBB3-205ENST00000554336 PPEF1O14829 653 aaPredicted RBP21.51■■□□□ 1.03
TUBB3-205ENST00000554336 ALDH1B1P30837 517 aa21.51■■□□□ 1.03
TUBB3-205ENST00000554336 IFIT5Q13325 482 aaKnown RBP21.51■■□□□ 1.03
TUBB3-205ENST00000554336 SIRT2Q8IXJ6 389 aa21.51■■□□□ 1.03
TUBB3-205ENST00000554336 HDAC5Q9UQL6 1122 aa21.51■■□□□ 1.03
TUBB3-205ENST00000554336 ANKRD18BA2A2Z9 1011 aa21.5■■□□□ 1.03
TUBB3-205ENST00000554336 CHADLQ6NUI6 762 aa21.5■■□□□ 1.03
TUBB3-205ENST00000554336 SRGAP3O43295 1099 aa21.49■■□□□ 1.03
TUBB3-205ENST00000554336 RPS8P62241 208 aaKnown RBP21.49■■□□□ 1.03
TUBB3-205ENST00000554336 PTPN12Q05209 780 aaKnown RBP21.49■■□□□ 1.03
TUBB3-205ENST00000554336 POLA2Q14181 598 aa21.49■■□□□ 1.03
TUBB3-205ENST00000554336 CCDC57Q2TAC2 916 aa21.49■■□□□ 1.03
TUBB3-205ENST00000554336 RTKN2Q8IZC4 609 aa21.49■■□□□ 1.03
TUBB3-205ENST00000554336 L3MBTL3Q96JM7 780 aaPredicted RBP21.49■■□□□ 1.03
TUBB3-205ENST00000554336 CDC5LQ99459 802 aaKnown RBP21.49■■□□□ 1.03
TUBB3-205ENST00000554336 PCDHB15Q9Y5E8 787 aa21.49■■□□□ 1.03
TUBB3-205ENST00000554336 COL4A5P29400 1685 aa21.49■■□□□ 1.03
TUBB3-205ENST00000554336 ATP8B2P98198 1209 aa21.48■■□□□ 1.03
TUBB3-205ENST00000554336 COL13A1Q5TAT6 717 aaPredicted RBP21.48■■□□□ 1.03
TUBB3-205ENST00000554336 ANKRD18AQ8IVF6 992 aa21.48■■□□□ 1.03
TUBB3-205ENST00000554336 SSH3Q8TE77 659 aa21.48■■□□□ 1.03
TUBB3-205ENST00000554336 PUS3Q9BZE2 481 aaKnown RBP21.48■■□□□ 1.03
TUBB3-205ENST00000554336 CHMP4BQ9H444 224 aaKnown RBP21.48■■□□□ 1.03
TUBB3-205ENST00000554336 PA2G4Q9UQ80 394 aaKnown RBP21.48■■□□□ 1.03
TUBB3-205ENST00000554336 BBOX1O75936 387 aa21.47■■□□□ 1.03
TUBB3-205ENST00000554336 IARSP41252 1262 aaKnown RBP21.47■■□□□ 1.03
TUBB3-205ENST00000554336 TAF1DQ9H5J8 278 aaPredicted RBP21.47■■□□□ 1.03
TUBB3-205ENST00000554336 ATP6V0A2Q9Y487 856 aa21.47■■□□□ 1.03
TUBB3-205ENST00000554336 ADAMTSL1Q8N6G6 1762 aa21.46■■□□□ 1.03
TUBB3-205ENST00000554336 IQCA1LA6NCM1 817 aa21.46■■□□□ 1.03
TUBB3-205ENST00000554336 LRRC24Q50LG9 513 aa21.45■■□□□ 1.02
TUBB3-205ENST00000554336 COPRSQ9NQ92 184 aa21.45■■□□□ 1.02
TUBB3-205ENST00000554336 BSDC1Q9NW68 430 aaPredicted RBP21.45■■□□□ 1.02
TUBB3-205ENST00000554336 FZD9O00144 591 aa21.44■■□□□ 1.02
TUBB3-205ENST00000554336 IGHMBP2P38935 993 aaKnown RBP21.44■■□□□ 1.02
TUBB3-205ENST00000554336 RPAP2Q8IXW5 612 aaPredicted RBP21.44■■□□□ 1.02
TUBB3-205ENST00000554336 SP8Q8IXZ3 490 aa21.44■■□□□ 1.02
TUBB3-205ENST00000554336 PSMD1Q99460 953 aa21.44■■□□□ 1.02
TUBB3-205ENST00000554336 EAPPQ56P03 285 aaPredicted RBP21.43■■□□□ 1.02
TUBB3-205ENST00000554336 TAF7LQ5H9L4 462 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 ATG9AQ7Z3C6 839 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 TMC4Q7Z404 712 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 LDHDQ86WU2 507 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 SIL1Q9H173 461 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 CREBZFQ9NS37 354 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 MINPP1Q9UNW1 487 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 RIPOR2Q9Y4F9 1068 aa21.43■■□□□ 1.02
TUBB3-205ENST00000554336 WTIPA6NIX2 430 aaPredicted RBP21.42■■□□□ 1.02
TUBB3-205ENST00000554336 HSPA1AP0DMV8 641 aaKnown RBP21.42■■□□□ 1.02
TUBB3-205ENST00000554336 HSPA1BP0DMV9 641 aaKnown RBP21.42■■□□□ 1.02
TUBB3-205ENST00000554336 LDHAL6AQ6ZMR3 332 aa21.42■■□□□ 1.02
TUBB3-205ENST00000554336 MPHOSPH8Q99549 860 aa21.42■■□□□ 1.02
TUBB3-205ENST00000554336 MKRN1Q9UHC7 482 aaKnown RBP21.42■■□□□ 1.02
TUBB3-205ENST00000554336 HACL1Q9UJ83 578 aa21.42■■□□□ 1.02
TUBB3-205ENST00000554336 PASKQ96RG2 1323 aa21.41■■□□□ 1.02
TUBB3-205ENST00000554336 EYA2O00167 538 aa21.41■■□□□ 1.02
TUBB3-205ENST00000554336 EPHX2P34913 555 aa21.41■■□□□ 1.02
TUBB3-205ENST00000554336 GPSM2P81274 684 aa21.41■■□□□ 1.02
TUBB3-205ENST00000554336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.41■■□□□ 1.02
TUBB3-205ENST00000554336 CHRNDQ07001 517 aa21.4■■□□□ 1.02
TUBB3-205ENST00000554336 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
TUBB3-205ENST00000554336 VGLL2Q8N8G2 317 aa21.4■■□□□ 1.02
TUBB3-205ENST00000554336 CNNM1Q9NRU3 951 aa21.4■■□□□ 1.02
TUBB3-205ENST00000554336 ARAP2Q8WZ64 1704 aa21.4■■□□□ 1.02
TUBB3-205ENST00000554336 ITGBL1O95965 494 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-205ENST00000554336 AAMPQ13685 434 aa21.39■■□□□ 1.01
TUBB3-205ENST00000554336 GPC2Q8N158 579 aa21.39■■□□□ 1.01
TUBB3-205ENST00000554336 HELBQ8NG08 1087 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-205ENST00000554336 JDP2Q8WYK2 163 aa21.39■■□□□ 1.01
TUBB3-205ENST00000554336 SNAP23O00161 211 aa21.38■■□□□ 1.01
TUBB3-205ENST00000554336 CIAO1O76071 339 aa21.38■■□□□ 1.01
TUBB3-205ENST00000554336 PODXL2Q9NZ53 605 aa21.38■■□□□ 1.01
TUBB3-205ENST00000554336 CLEC11AQ9Y240 323 aa21.38■■□□□ 1.01
TUBB3-205ENST00000554336 NOP58Q9Y2X3 529 aaKnown RBP21.38■■□□□ 1.01
TUBB3-205ENST00000554336 XDHP47989 1333 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms