RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 IGKV5-2P06315 115 aa28.14■■■□□ 2.1
RCCD1-202ENST00000554302 PI4KAP1Q8N8J0 262 aa28.14■■■□□ 2.1
RCCD1-202ENST00000554302 TRPM4Q8TD43 1214 aa28.14■■■□□ 2.1
RCCD1-202ENST00000554302 SHTN1A0MZ66 631 aa28.13■■■□□ 2.09
RCCD1-202ENST00000554302 JARID2Q92833 1246 aaPredicted RBP28.13■■■□□ 2.09
RCCD1-202ENST00000554302 ZBTB12Q9Y330 459 aaPredicted RBP28.13■■■□□ 2.09
RCCD1-202ENST00000554302 TLL2Q9Y6L7 1015 aa28.13■■■□□ 2.09
RCCD1-202ENST00000554302 RTL9Q8NET4 1388 aa28.12■■■□□ 2.09
RCCD1-202ENST00000554302 ECE2O60344 883 aa28.12■■■□□ 2.09
RCCD1-202ENST00000554302 TWISTNBQ3B726 338 aaPredicted RBP28.12■■■□□ 2.09
RCCD1-202ENST00000554302 MICALL2Q8IY33 904 aa28.12■■■□□ 2.09
RCCD1-202ENST00000554302 GLIS2Q9BZE0 524 aaPredicted RBP28.12■■■□□ 2.09
RCCD1-202ENST00000554302 PRDM10Q9NQV6 1147 aa28.12■■■□□ 2.09
RCCD1-202ENST00000554302 H7C1D1 291 aa28.11■■■□□ 2.09
RCCD1-202ENST00000554302 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
RCCD1-202ENST00000554302 GPR101Q96P66 508 aaPredicted RBP28.11■■■□□ 2.09
RCCD1-202ENST00000554302 STK31Q9BXU1 1019 aa28.11■■■□□ 2.09
RCCD1-202ENST00000554302 KCNQ5Q9NR82 932 aa28.11■■■□□ 2.09
RCCD1-202ENST00000554302 RPS12P25398 132 aaKnown RBP28.1■■■□□ 2.09
RCCD1-202ENST00000554302 CTCFP49711 727 aaPredicted RBP28.1■■■□□ 2.09
RCCD1-202ENST00000554302 DOK7Q18PE1 504 aa28.1■■■□□ 2.09
RCCD1-202ENST00000554302 AIDAQ96BJ3 306 aa28.1■■■□□ 2.09
RCCD1-202ENST00000554302 ZC3H12CQ9C0D7 883 aaKnown RBP28.1■■■□□ 2.09
RCCD1-202ENST00000554302 G2E3Q7L622 706 aa28.09■■■□□ 2.09
RCCD1-202ENST00000554302 MAP2K1Q02750 393 aaPredicted RBP28.08■■■□□ 2.09
RCCD1-202ENST00000554302 CDC37L1Q7L3B6 337 aa28.08■■■□□ 2.09
RCCD1-202ENST00000554302 CAPNS2Q96L46 248 aa28.08■■■□□ 2.09
RCCD1-202ENST00000554302 CCDC85AQ96PX6 553 aaPredicted RBP28.08■■■□□ 2.09
RCCD1-202ENST00000554302 MRS2Q9HD23 443 aa28.08■■■□□ 2.09
RCCD1-202ENST00000554302 GGA1Q9UJY5 639 aa28.08■■■□□ 2.09
RCCD1-202ENST00000554302 SCN9AQ15858 1988 aa28.08■■■□□ 2.09
RCCD1-202ENST00000554302 UFL1O94874 794 aa28.07■■■□□ 2.08
RCCD1-202ENST00000554302 CELF2O95319 508 aaKnown RBP28.07■■■□□ 2.08
RCCD1-202ENST00000554302 ECE1P42892 770 aa28.07■■■□□ 2.08
RCCD1-202ENST00000554302 CTSWP56202 376 aa28.07■■■□□ 2.08
RCCD1-202ENST00000554302 CYP4F22Q6NT55 531 aa28.07■■■□□ 2.08
RCCD1-202ENST00000554302 SAPCD2Q86UD0 394 aa28.07■■■□□ 2.08
RCCD1-202ENST00000554302 ANKIB1Q9P2G1 1089 aa28.07■■■□□ 2.08
RCCD1-202ENST00000554302 NEURL1BA8MQ27 555 aa28.06■■■□□ 2.08
RCCD1-202ENST00000554302 VIL1P09327 827 aaKnown RBP28.06■■■□□ 2.08
RCCD1-202ENST00000554302 NEXNQ0ZGT2 675 aa28.06■■■□□ 2.08
RCCD1-202ENST00000554302 CWF19L2Q2TBE0 894 aaKnown RBP28.06■■■□□ 2.08
RCCD1-202ENST00000554302 SAMD7Q7Z3H4 446 aa28.06■■■□□ 2.08
RCCD1-202ENST00000554302 ANKRD18AQ8IVF6 992 aa28.06■■■□□ 2.08
RCCD1-202ENST00000554302 TTLL11Q8NHH1 800 aa28.06■■■□□ 2.08
RCCD1-202ENST00000554302 HHIPL1Q96JK4 782 aa28.06■■■□□ 2.08
RCCD1-202ENST00000554302 ZNF609O15014 1411 aa28.05■■■□□ 2.08
RCCD1-202ENST00000554302 EGFRP00533 1210 aa28.05■■■□□ 2.08
RCCD1-202ENST00000554302 XDHP47989 1333 aa28.05■■■□□ 2.08
RCCD1-202ENST00000554302 FANCIQ9NVI1 1328 aa28.04■■■□□ 2.08
RCCD1-202ENST00000554302 H7C1W4 665 aa28.04■■■□□ 2.08
RCCD1-202ENST00000554302 MYH3P11055 1940 aa28.04■■■□□ 2.08
RCCD1-202ENST00000554302 ZNF316A6NFI3 1004 aaPredicted RBP28.03■■■□□ 2.08
RCCD1-202ENST00000554302 ANP32CO43423 234 aa28.03■■■□□ 2.08
RCCD1-202ENST00000554302 WDR63Q8IWG1 891 aa28.03■■■□□ 2.08
RCCD1-202ENST00000554302 CDC5LQ99459 802 aaKnown RBP28.03■■■□□ 2.08
RCCD1-202ENST00000554302 HSPA8P11142 646 aaKnown RBP28.02■■■□□ 2.08
RCCD1-202ENST00000554302 LBX1P52954 281 aa28.02■■■□□ 2.08
RCCD1-202ENST00000554302 FLIIQ13045 1269 aa28.02■■■□□ 2.08
RCCD1-202ENST00000554302 TBC1D10BQ4KMP7 808 aaPredicted RBP28.02■■■□□ 2.08
RCCD1-202ENST00000554302 GREM2Q9H772 168 aa28.02■■■□□ 2.08
RCCD1-202ENST00000554302 BSDC1Q9NW68 430 aaPredicted RBP28.02■■■□□ 2.08
RCCD1-202ENST00000554302 PSME4Q14997 1843 aa28.02■■■□□ 2.08
RCCD1-202ENST00000554302 CAPN15O75808 1086 aa28.01■■■□□ 2.07
RCCD1-202ENST00000554302 ATP2B4P23634 1241 aa28.01■■■□□ 2.07
RCCD1-202ENST00000554302 MAP2K2P36507 400 aa28.01■■■□□ 2.07
RCCD1-202ENST00000554302 PAXIP1Q6ZW49 1069 aaPredicted RBP28.01■■■□□ 2.07
RCCD1-202ENST00000554302 USP48Q86UV5 1035 aa28.01■■■□□ 2.07
RCCD1-202ENST00000554302 VAMP4O75379 141 aa28■■■□□ 2.07
RCCD1-202ENST00000554302 PLA2G12BQ9BX93 195 aa28■■■□□ 2.07
RCCD1-202ENST00000554302 CACNA1FO60840 1977 aa27.99■■■□□ 2.07
RCCD1-202ENST00000554302 CASP7P55210 303 aa27.99■■■□□ 2.07
RCCD1-202ENST00000554302 GCKRQ14397 625 aa27.99■■■□□ 2.07
RCCD1-202ENST00000554302 UBE3BQ7Z3V4 1068 aa27.99■■■□□ 2.07
RCCD1-202ENST00000554302 MINPP1Q9UNW1 487 aa27.99■■■□□ 2.07
RCCD1-202ENST00000554302 RSBN1LQ6PCB5 846 aaPredicted RBP27.98■■■□□ 2.07
RCCD1-202ENST00000554302 PODNQ7Z5L7 613 aa27.98■■■□□ 2.07
RCCD1-202ENST00000554302 AGBL3Q8NEM8 1001 aa27.98■■■□□ 2.07
RCCD1-202ENST00000554302 WTIPA6NIX2 430 aaPredicted RBP27.97■■■□□ 2.07
RCCD1-202ENST00000554302 G3V3G9 751 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 AOC2O75106 756 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 ZNF280AP59817 542 aaPredicted RBP27.97■■■□□ 2.07
RCCD1-202ENST00000554302 KIF4BQ2VIQ3 1234 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 DCAF8Q5TAQ9 597 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 DLK2Q6UY11 383 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 KRT26Q7Z3Y9 468 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 GMLQ99445 158 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 ZNF408Q9H9D4 720 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 MED23Q9ULK4 1368 aa27.97■■■□□ 2.07
RCCD1-202ENST00000554302 GRM1Q13255 1194 aa27.96■■■□□ 2.07
RCCD1-202ENST00000554302 RBM26Q5T8P6 1007 aaKnown RBP27.96■■■□□ 2.07
RCCD1-202ENST00000554302 DNAAF4Q8WXU2 420 aa27.96■■■□□ 2.07
RCCD1-202ENST00000554302 POLR2AP24928 1970 aaKnown RBP27.95■■■□□ 2.07
RCCD1-202ENST00000554302 SPEF2Q9C093 1822 aa27.95■■■□□ 2.07
RCCD1-202ENST00000554302 EXOSC9Q06265 439 aaKnown RBP27.95■■■□□ 2.06
RCCD1-202ENST00000554302 FKBP5Q13451 457 aaPredicted RBP27.95■■■□□ 2.06
RCCD1-202ENST00000554302 LINS1Q8NG48 757 aa27.95■■■□□ 2.06
RCCD1-202ENST00000554302 DCPSQ96C86 337 aaKnown RBP27.95■■■□□ 2.06
RCCD1-202ENST00000554302 CSF1RP07333 972 aa27.94■■■□□ 2.06
RCCD1-202ENST00000554302 SALL2Q9Y467 1007 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms