RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 DBNDD1Q9H9R9 158 aa10.61□□□□□ -0.71
ACTN1-212ENST00000554158 GBA2Q9HCG7 927 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-212ENST00000554158 PSMD14O00487 310 aa10.6□□□□□ -0.71
ACTN1-212ENST00000554158 ECE2O60344 883 aa10.6□□□□□ -0.71
ACTN1-212ENST00000554158 PDIA6Q15084 440 aa10.6□□□□□ -0.71
ACTN1-212ENST00000554158 SAMD7Q7Z3H4 446 aa10.6□□□□□ -0.71
ACTN1-212ENST00000554158 ZC3H12CQ9C0D7 883 aaKnown RBP10.6□□□□□ -0.71
ACTN1-212ENST00000554158 PSME4Q14997 1843 aa10.6□□□□□ -0.71
ACTN1-212ENST00000554158 MYH3P11055 1940 aa10.6□□□□□ -0.71
ACTN1-212ENST00000554158 YDJCA8MPS7 323 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-212ENST00000554158 KIF4BQ2VIQ3 1234 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-212ENST00000554158 PLBD2Q8NHP8 589 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 ZNF428Q96B54 188 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 SAGE1Q9NXZ1 904 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 ANKIB1Q9P2G1 1089 aa10.59□□□□□ -0.71
ACTN1-212ENST00000554158 SPEF2Q9C093 1822 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 SCN9AQ15858 1988 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 SHTN1A0MZ66 631 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 TRPA1O75762 1119 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-212ENST00000554158 TMPOP42166 694 aaKnown RBP10.58□□□□□ -0.72
ACTN1-212ENST00000554158 WDR43Q15061 677 aaKnown RBP eCLIP10.58□□□□□ -0.72
ACTN1-212ENST00000554158 DOK7Q18PE1 504 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 RTL5Q5HYW3 569 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-212ENST00000554158 FAM89AQ96GI7 184 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 CHPF2Q9P2E5 772 aa10.58□□□□□ -0.72
ACTN1-212ENST00000554158 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-212ENST00000554158 ADM5C9JUS6 153 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 IRS4O14654 1257 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-212ENST00000554158 UFL1O94874 794 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 RPS8P62241 208 aaKnown RBP10.57□□□□□ -0.72
ACTN1-212ENST00000554158 GPSM2P81274 684 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 KIF23Q02241 960 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-212ENST00000554158 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 SF3B3Q15393 1217 aaKnown RBP10.57□□□□□ -0.72
ACTN1-212ENST00000554158 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 RIC3Q7Z5B4 369 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 GGA3Q9NZ52 723 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 GGA1Q9UJY5 639 aa10.57□□□□□ -0.72
ACTN1-212ENST00000554158 HOXB7P09629 217 aa10.56□□□□□ -0.72
ACTN1-212ENST00000554158 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-212ENST00000554158 RALBP1Q15311 655 aa10.56□□□□□ -0.72
ACTN1-212ENST00000554158 CELF1Q92879 486 aaKnown RBP10.56□□□□□ -0.72
ACTN1-212ENST00000554158 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
ACTN1-212ENST00000554158 HDAC9Q9UKV0 1011 aa10.56□□□□□ -0.72
ACTN1-212ENST00000554158 PAPPA2Q9BXP8 1791 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 NF2P35240 595 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 SOX10P56693 466 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 CCDC152Q4G0S7 254 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 CCDC146Q8IYE0 955 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 TBC1D16Q8TBP0 767 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 RNF186Q9NXI6 227 aa10.55□□□□□ -0.72
ACTN1-212ENST00000554158 FAM155AB1AL88 458 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-212ENST00000554158 CHL1O00533 1208 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 SLC10A3P09131 477 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 FKBP1BP68106 108 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
ACTN1-212ENST00000554158 AGBL3Q8NEM8 1001 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 CDCA5Q96FF9 252 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 ZIC5Q96T25 663 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 ISCA1Q9BUE6 129 aa10.54□□□□□ -0.72
ACTN1-212ENST00000554158 ABCB7O75027 752 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
ACTN1-212ENST00000554158 EGFRP00533 1210 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
ACTN1-212ENST00000554158 SCARF1Q14162 830 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 ANGEL2Q5VTE6 544 aaKnown RBP10.53□□□□□ -0.72
ACTN1-212ENST00000554158 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-212ENST00000554158 DLK2Q6UY11 383 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 PLCD3Q8N3E9 789 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 OGFOD1Q8N543 542 aa10.53□□□□□ -0.72
ACTN1-212ENST00000554158 ZBTB38Q8NAP3 1195 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-212ENST00000554158 RTL9Q8NET4 1388 aa10.52□□□□□ -0.72
ACTN1-212ENST00000554158 PDE8AO60658 829 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.73
ACTN1-212ENST00000554158 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
ACTN1-212ENST00000554158 DUSP27Q5VZP5 1158 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 CSRNP1Q96S65 589 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
ACTN1-212ENST00000554158 MYD88Q99836 296 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 MYOZ2Q9NPC6 264 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 KCNQ5Q9NR82 932 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 PODXL2Q9NZ53 605 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms