RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
PSMC6-205ENST00000553899 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
PSMC6-205ENST00000553899 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
PSMC6-205ENST00000553899 DCTPP1Q9H773 170 aa16.88■□□□□ 0.29
PSMC6-205ENST00000553899 CACNA1SQ13698 1873 aa16.87■□□□□ 0.29
PSMC6-205ENST00000553899 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
PSMC6-205ENST00000553899 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
PSMC6-205ENST00000553899 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
PSMC6-205ENST00000553899 IRX6P78412 446 aaPredicted RBP16.86■□□□□ 0.29
PSMC6-205ENST00000553899 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
PSMC6-205ENST00000553899 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
PSMC6-205ENST00000553899 RTFDC1Q9BY42 306 aaPredicted RBP16.86■□□□□ 0.29
PSMC6-205ENST00000553899 CNNM1Q9NRU3 951 aa16.86■□□□□ 0.29
PSMC6-205ENST00000553899 LTBP1Q14766 1721 aa16.86■□□□□ 0.29
PSMC6-205ENST00000553899 LTBP3Q9NS15 1303 aa16.86■□□□□ 0.29
PSMC6-205ENST00000553899 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
PSMC6-205ENST00000553899 FER1L6Q2WGJ9 1857 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
PSMC6-205ENST00000553899 CCDC93Q567U6 631 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 PSMD1Q99460 953 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 LEMD3Q9Y2U8 911 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 XDHP47989 1333 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 COL4A1P02462 1669 aa16.85■□□□□ 0.29
PSMC6-205ENST00000553899 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
PSMC6-205ENST00000553899 PDE8BO95263 885 aa16.84■□□□□ 0.29
PSMC6-205ENST00000553899 VGLL2Q8N8G2 317 aa16.84■□□□□ 0.29
PSMC6-205ENST00000553899 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
PSMC6-205ENST00000553899 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
PSMC6-205ENST00000553899 ZBTB22O15209 634 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 GRIN3BO60391 1043 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 CHRNDQ07001 517 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 UBE4AQ14139 1066 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.28
PSMC6-205ENST00000553899 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 CEP126Q9P2H0 1117 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 AKAP2Q9Y2D5 859 aa16.83■□□□□ 0.28
PSMC6-205ENST00000553899 C21orf2O43822 256 aa16.82■□□□□ 0.28
PSMC6-205ENST00000553899 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
PSMC6-205ENST00000553899 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
PSMC6-205ENST00000553899 MPNDQ8N594 471 aa16.82■□□□□ 0.28
PSMC6-205ENST00000553899 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
PSMC6-205ENST00000553899 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
PSMC6-205ENST00000553899 PUS3Q9BZE2 481 aaKnown RBP16.82■□□□□ 0.28
PSMC6-205ENST00000553899 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
PSMC6-205ENST00000553899 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
PSMC6-205ENST00000553899 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
PSMC6-205ENST00000553899 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
PSMC6-205ENST00000553899 NSFL1CQ9UNZ2 370 aaKnown RBP16.81■□□□□ 0.28
PSMC6-205ENST00000553899 SASH1O94885 1247 aa16.8■□□□□ 0.28
PSMC6-205ENST00000553899 FKBP4Q02790 459 aaKnown RBP eCLIP16.8■□□□□ 0.28
PSMC6-205ENST00000553899 PUM3Q15397 648 aaKnown RBP16.8■□□□□ 0.28
PSMC6-205ENST00000553899 SIL1Q9H173 461 aa16.8■□□□□ 0.28
PSMC6-205ENST00000553899 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
PSMC6-205ENST00000553899 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
PSMC6-205ENST00000553899 ZNF804BA4D1E1 1349 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 FGFR2P21802 821 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 GPSM2P81274 684 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 TBC1D16Q8TBP0 767 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 LPIN2Q92539 896 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 EYA3Q99504 573 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 LRRCC1Q9C099 1032 aa16.79■□□□□ 0.28
PSMC6-205ENST00000553899 DUOX1Q9NRD9 1551 aa16.78■□□□□ 0.28
PSMC6-205ENST00000553899 OS9Q13438 667 aaPredicted RBP16.78■□□□□ 0.28
PSMC6-205ENST00000553899 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
PSMC6-205ENST00000553899 TAOK3Q9H2K8 898 aa16.78■□□□□ 0.28
PSMC6-205ENST00000553899 EXOC6BQ9Y2D4 811 aa16.78■□□□□ 0.28
PSMC6-205ENST00000553899 MED23Q9ULK4 1368 aa16.77■□□□□ 0.28
PSMC6-205ENST00000553899 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
PSMC6-205ENST00000553899 IGHDP01880 384 aa16.77■□□□□ 0.28
PSMC6-205ENST00000553899 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.28
PSMC6-205ENST00000553899 POLLQ9UGP5 575 aa16.77■□□□□ 0.28
PSMC6-205ENST00000553899 ARAP2Q8WZ64 1704 aa16.76■□□□□ 0.27
PSMC6-205ENST00000553899 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
PSMC6-205ENST00000553899 TFCP2Q12800 502 aa16.76■□□□□ 0.27
PSMC6-205ENST00000553899 GPR162Q16538 588 aa16.76■□□□□ 0.27
PSMC6-205ENST00000553899 CENPQQ7L2Z9 268 aaPredicted RBP16.76■□□□□ 0.27
PSMC6-205ENST00000553899 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
PSMC6-205ENST00000553899 KDM2BQ8NHM5 1336 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 IRS2Q9Y4H2 1338 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
PSMC6-205ENST00000553899 NFKBIEO00221 500 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 TAF5LO75529 589 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 UFL1O94874 794 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 SLC5A1P13866 664 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 KCNJ4P48050 445 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 ATP2B3Q16720 1220 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 WASHC4Q2M389 1173 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 CCDC136Q96JN2 1154 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 ZC3H12CQ9C0D7 883 aaKnown RBP16.75■□□□□ 0.27
PSMC6-205ENST00000553899 SBF1O95248 1867 aa16.75■□□□□ 0.27
PSMC6-205ENST00000553899 C6orf229H3BNL8 230 aa16.74■□□□□ 0.27
PSMC6-205ENST00000553899 LMNB1P20700 586 aa16.74■□□□□ 0.27
PSMC6-205ENST00000553899 NUCB1Q02818 461 aa16.74■□□□□ 0.27
PSMC6-205ENST00000553899 TNNI3KQ59H18 835 aa16.74■□□□□ 0.27
PSMC6-205ENST00000553899 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
PSMC6-205ENST00000553899 HELBQ8NG08 1087 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms