RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 GJB2P29033 226 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 CLCN1P35523 988 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 UBE2HP62256 183 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 CCDC57Q2TAC2 916 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 USP48Q86UV5 1035 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 NLRP10Q86W26 655 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 RIPOR2Q9Y4F9 1068 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 EXOSC10Q01780 885 aaKnown RBP10.98□□□□□ -0.65
PRKCH-209ENST00000553889 UVSSAQ2YD98 709 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 LRRC24Q50LG9 513 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 CCDC83Q8IWF9 413 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 ZNF34Q8IZ26 560 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 SMARCC2Q8TAQ2 1214 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 JARID2Q92833 1246 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-209ENST00000553889 SLC4A9Q96Q91 983 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 WDR19Q8NEZ3 1342 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 RTL9Q8NET4 1388 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 ROBO1Q9Y6N7 1651 aa10.98□□□□□ -0.65
PRKCH-209ENST00000553889 PFKFB2O60825 505 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 CYP21A2P08686 494 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 IFIT1P09914 478 aaKnown RBP10.97□□□□□ -0.65
PRKCH-209ENST00000553889 CPA1P15085 419 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 TIMM10P62072 90 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
PRKCH-209ENST00000553889 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
PRKCH-209ENST00000553889 VGLL2Q8N8G2 317 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 TTLL11Q8NHH1 800 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 ANP32BQ92688 251 aaKnown RBP10.97□□□□□ -0.65
PRKCH-209ENST00000553889 GTF3C6Q969F1 213 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 EDC3Q96F86 508 aaKnown RBP10.97□□□□□ -0.65
PRKCH-209ENST00000553889 ATRNO75882 1429 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 RIC1Q4ADV7 1423 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 LTBP4Q8N2S1 1624 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 NRAPQ86VF7 1730 aa10.97□□□□□ -0.65
PRKCH-209ENST00000553889 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 HSP90B1P14625 803 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 CCDC183Q5T5S1 534 aa10.96□□□□□ -0.65
PRKCH-209ENST00000553889 LARP1BQ659C4 914 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 ATL3Q6DD88 541 aa10.96□□□□□ -0.65
PRKCH-209ENST00000553889 BARGINQ6ZT62 677 aa10.96□□□□□ -0.65
PRKCH-209ENST00000553889 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 ZNF274Q96GC6 653 aaPredicted RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 DNAJC2Q99543 621 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 PUS3Q9BZE2 481 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 CTNNA3Q9UI47 895 aa10.96□□□□□ -0.65
PRKCH-209ENST00000553889 NSFL1CQ9UNZ2 370 aaKnown RBP10.96□□□□□ -0.65
PRKCH-209ENST00000553889 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
PRKCH-209ENST00000553889 MYH3P11055 1940 aa10.96□□□□□ -0.66
PRKCH-209ENST00000553889 TCHHQ07283 1943 aa10.96□□□□□ -0.66
PRKCH-209ENST00000553889 NUP98P52948 1817 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 SPATA31A1Q5TZJ5 1347 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 ESPNB1AK53 854 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 GOLIM4O00461 696 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 ZBTB22O15209 634 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 PDE8AO60658 829 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
PRKCH-209ENST00000553889 CTSWP56202 376 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 DDX46Q7L014 1031 aaKnown RBP10.95□□□□□ -0.66
PRKCH-209ENST00000553889 XAGE2Q96GT9 111 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 NEUROD6Q96NK8 337 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 SCAND2PQ9GZW5 306 aaPredicted RBP10.95□□□□□ -0.66
PRKCH-209ENST00000553889 RBSNQ9H1K0 784 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 KIF3AQ9Y496 699 aa10.95□□□□□ -0.66
PRKCH-209ENST00000553889 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 MAST3O60307 1309 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 FGFR2P21802 821 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 MCM5P33992 734 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 KRT85P78386 507 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 HMGN5P82970 282 aaKnown RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 TTF1Q15361 905 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 ATP2B3Q16720 1220 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 PARP10Q53GL7 1025 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 NAA16Q6N069 864 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 APPBP2Q92624 585 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 TSPY26PQ9H489 355 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 ZSCAN16Q9H4T2 348 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
PRKCH-209ENST00000553889 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 SLIT2O94813 1529 aa10.94□□□□□ -0.66
PRKCH-209ENST00000553889 ARAP2Q8WZ64 1704 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 MROH5Q6ZUA9 1318 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 GADD45BO75293 160 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-209ENST00000553889 UQCRFS1P1P0C7P4 283 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 COL9A3Q14050 684 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-209ENST00000553889 UBE3CQ15386 1083 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 ALX1Q15699 326 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 HLFQ16534 295 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms