RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PI4KAP1Q8N8J0 262 aa10.6□□□□□ -0.71
PSEN1-209ENST00000553855 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
PSEN1-209ENST00000553855 ISCA1Q9BUE6 129 aa10.6□□□□□ -0.71
PSEN1-209ENST00000553855 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-209ENST00000553855 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-209ENST00000553855 NRXN2Q9P2S2 1712 aa10.6□□□□□ -0.71
PSEN1-209ENST00000553855 AFDNP55196 1824 aaKnown RBP10.59□□□□□ -0.71
PSEN1-209ENST00000553855 C21orf2O43822 256 aa10.59□□□□□ -0.71
PSEN1-209ENST00000553855 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
PSEN1-209ENST00000553855 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
PSEN1-209ENST00000553855 DDX46Q7L014 1031 aaKnown RBP10.59□□□□□ -0.71
PSEN1-209ENST00000553855 N4BP2Q86UW6 1770 aaPredicted RBP10.59□□□□□ -0.71
PSEN1-209ENST00000553855 KLRG2A4D1S0 409 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-209ENST00000553855 OSBPP22059 807 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 SLC10A5Q5PT55 438 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-209ENST00000553855 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 FAM89AQ96GI7 184 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 RIC1Q4ADV7 1423 aa10.58□□□□□ -0.72
PSEN1-209ENST00000553855 ABCC12Q96J65 1359 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 NUP98P52948 1817 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 IRS4O14654 1257 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-209ENST00000553855 PCCAP05165 728 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-209ENST00000553855 HCLS1P14317 486 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-209ENST00000553855 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 RTL5Q5HYW3 569 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-209ENST00000553855 CC2D2BQ6DHV5 1058 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 RTKN2Q8IZC4 609 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 SMC4Q9NTJ3 1288 aa10.57□□□□□ -0.72
PSEN1-209ENST00000553855 IRF6O14896 467 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 SNPHO15079 494 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 ALDH1L2Q3SY69 923 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 CRY2Q49AN0 593 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 G2E3Q7L622 706 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 RNF181Q9P0P0 153 aa10.56□□□□□ -0.72
PSEN1-209ENST00000553855 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-209ENST00000553855 BBOX1O75936 387 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 LMNB1P20700 586 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 HOXA10P31260 410 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-209ENST00000553855 HIC1Q14526 733 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 AMHR2Q16671 573 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 CCDC152Q4G0S7 254 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 PTPRCP08575 1304 aa10.55□□□□□ -0.72
PSEN1-209ENST00000553855 ADCY9O60503 1353 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 NEURL1BA8MQ27 555 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 PDE8AO60658 829 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 GRAPQ13588 217 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 TMEM92Q6UXU6 159 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 GRAPLQ8TC17 118 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-209ENST00000553855 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-209ENST00000553855 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 SRCIN1Q9C0H9 1055 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 KIAA1551Q9HCM1 1747 aa10.54□□□□□ -0.72
PSEN1-209ENST00000553855 C9orf78Q9NZ63 289 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-209ENST00000553855 ANKRD36CQ5JPF3 1778 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 TBC1D12O60347 775 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 IGKV5-2P06315 115 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
PSEN1-209ENST00000553855 RASSF7Q02833 373 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 SF3B3Q15393 1217 aaKnown RBP10.53□□□□□ -0.72
PSEN1-209ENST00000553855 CWF19L2Q2TBE0 894 aaKnown RBP10.53□□□□□ -0.72
PSEN1-209ENST00000553855 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
PSEN1-209ENST00000553855 SYNE4Q8N205 404 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
PSEN1-209ENST00000553855 SUPT20HQ8NEM7 779 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 DDX12PQ92771 950 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 ZBED9Q6R2W3 1325 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 CDHR2Q9BYE9 1310 aa10.53□□□□□ -0.72
PSEN1-209ENST00000553855 F6X3S4 739 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 IPO8O15397 1037 aaKnown RBP10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 GCKRQ14397 625 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 UBE3BQ7Z3V4 1068 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-209ENST00000553855 JDP2Q8WYK2 163 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
PSEN1-209ENST00000553855 BCL2L13Q9BXK5 485 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 API5Q9BZZ5 524 aaKnown RBP10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ANKRD31Q8N7Z5 1873 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ABCC4O15439 1325 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 KDM2BQ8NHM5 1336 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 LTBP3Q9NS15 1303 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ZC3H4Q9UPT8 1303 aaKnown RBP10.52□□□□□ -0.73
PSEN1-209ENST00000553855 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.73
PSEN1-209ENST00000553855 CHD4Q14839 1912 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms