RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 MPHOSPH8Q99549 860 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 BICC1Q9H694 974 aaKnown RBP23.21■■□□□ 1.31
CPSF2-202ENST00000553427 NMRK2Q9NPI5 230 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 ANKIB1Q9P2G1 1089 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 GGA1Q9UJY5 639 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 CHMP3Q9Y3E7 222 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 ZNF541Q9H0D2 1346 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 L3MBTL3Q96JM7 780 aaPredicted RBP23.2■■□□□ 1.3
CPSF2-202ENST00000553427 HDAC5Q9UQL6 1122 aa23.2■■□□□ 1.3
CPSF2-202ENST00000553427 SPEF2Q9C093 1822 aa23.19■■□□□ 1.3
CPSF2-202ENST00000553427 C6orf229H3BNL8 230 aa23.19■■□□□ 1.3
CPSF2-202ENST00000553427 UFL1O94874 794 aa23.19■■□□□ 1.3
CPSF2-202ENST00000553427 UBTFL1P0CB47 393 aaPredicted RBP23.19■■□□□ 1.3
CPSF2-202ENST00000553427 ATP2B4P23634 1241 aa23.19■■□□□ 1.3
CPSF2-202ENST00000553427 WASHC4Q2M389 1173 aa23.19■■□□□ 1.3
CPSF2-202ENST00000553427 ZNRF3Q9ULT6 936 aa23.19■■□□□ 1.3
CPSF2-202ENST00000553427 EIF6P56537 245 aaKnown RBP23.18■■□□□ 1.3
CPSF2-202ENST00000553427 GPC2Q8N158 579 aa23.18■■□□□ 1.3
CPSF2-202ENST00000553427 ANKRD2Q9GZV1 360 aa23.18■■□□□ 1.3
CPSF2-202ENST00000553427 DDNO94850 711 aaPredicted RBP23.17■■□□□ 1.3
CPSF2-202ENST00000553427 VEGFAP15692 232 aaPredicted RBP23.17■■□□□ 1.3
CPSF2-202ENST00000553427 GNAI3P08754 354 aa23.16■■□□□ 1.3
CPSF2-202ENST00000553427 MEIS3Q99687 375 aa23.16■■□□□ 1.3
CPSF2-202ENST00000553427 TNNQ9UQP3 1299 aa23.16■■□□□ 1.3
CPSF2-202ENST00000553427 LEMD3Q9Y2U8 911 aa23.16■■□□□ 1.3
CPSF2-202ENST00000553427 MED23Q9ULK4 1368 aa23.15■■□□□ 1.3
CPSF2-202ENST00000553427 POTECB2RU33 542 aa23.15■■□□□ 1.3
CPSF2-202ENST00000553427 TAF7LQ5H9L4 462 aa23.15■■□□□ 1.3
CPSF2-202ENST00000553427 ZC3H12CQ9C0D7 883 aaKnown RBP23.15■■□□□ 1.3
CPSF2-202ENST00000553427 RRAGCQ9HB90 399 aa23.15■■□□□ 1.3
CPSF2-202ENST00000553427 CHRNDQ07001 517 aa23.14■■□□□ 1.29
CPSF2-202ENST00000553427 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
CPSF2-202ENST00000553427 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.29
CPSF2-202ENST00000553427 IQCA1LA6NCM1 817 aa23.13■■□□□ 1.29
CPSF2-202ENST00000553427 LDHAL6AQ6ZMR3 332 aa23.13■■□□□ 1.29
CPSF2-202ENST00000553427 DZIP1LQ8IYY4 767 aaKnown RBP23.13■■□□□ 1.29
CPSF2-202ENST00000553427 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
CPSF2-202ENST00000553427 SCN4AP35499 1836 aa23.12■■□□□ 1.29
CPSF2-202ENST00000553427 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
CPSF2-202ENST00000553427 YDJCA8MPS7 323 aa23.12■■□□□ 1.29
CPSF2-202ENST00000553427 TOMM70O94826 608 aa23.12■■□□□ 1.29
CPSF2-202ENST00000553427 CXCL9Q07325 125 aa23.12■■□□□ 1.29
CPSF2-202ENST00000553427 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
CPSF2-202ENST00000553427 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
CPSF2-202ENST00000553427 GPR101Q96P66 508 aaPredicted RBP23.12■■□□□ 1.29
CPSF2-202ENST00000553427 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
CPSF2-202ENST00000553427 RIMBP2O15034 1052 aa23.11■■□□□ 1.29
CPSF2-202ENST00000553427 C1QTNF8P60827 252 aa23.11■■□□□ 1.29
CPSF2-202ENST00000553427 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
CPSF2-202ENST00000553427 LRRFIP2Q9Y608 721 aaKnown RBP23.11■■□□□ 1.29
CPSF2-202ENST00000553427 ECE2O60344 883 aa23.1■■□□□ 1.29
CPSF2-202ENST00000553427 RFX5P48382 616 aaPredicted RBP23.1■■□□□ 1.29
CPSF2-202ENST00000553427 TNIP1Q15025 636 aa23.1■■□□□ 1.29
CPSF2-202ENST00000553427 CIAPIN1Q6FI81 312 aa23.1■■□□□ 1.29
CPSF2-202ENST00000553427 C15orf52Q6ZUT6 534 aaKnown RBP23.1■■□□□ 1.29
CPSF2-202ENST00000553427 C16orf71Q8IYS4 520 aaPredicted RBP23.1■■□□□ 1.29
CPSF2-202ENST00000553427 RBM46Q8TBY0 533 aaKnown RBP23.1■■□□□ 1.29
CPSF2-202ENST00000553427 DBNDD1Q9H9R9 158 aa23.1■■□□□ 1.29
CPSF2-202ENST00000553427 MS4A1P11836 297 aa23.09■■□□□ 1.29
CPSF2-202ENST00000553427 RLBP1P12271 317 aa23.09■■□□□ 1.29
CPSF2-202ENST00000553427 MTX1Q13505 466 aa23.09■■□□□ 1.29
CPSF2-202ENST00000553427 RIPOR2Q9Y4F9 1068 aa23.09■■□□□ 1.29
CPSF2-202ENST00000553427 MROH5Q6ZUA9 1318 aa23.08■■□□□ 1.29
CPSF2-202ENST00000553427 ZNF609O15014 1411 aa23.08■■□□□ 1.29
CPSF2-202ENST00000553427 HACL1Q9UJ83 578 aa23.08■■□□□ 1.29
CPSF2-202ENST00000553427 FBXO3Q9UK99 471 aa23.08■■□□□ 1.29
CPSF2-202ENST00000553427 GJA3Q9Y6H8 435 aa23.08■■□□□ 1.29
CPSF2-202ENST00000553427 IRS2Q9Y4H2 1338 aa23.08■■□□□ 1.28
CPSF2-202ENST00000553427 WTIPA6NIX2 430 aaPredicted RBP23.07■■□□□ 1.28
CPSF2-202ENST00000553427 RAD17O75943 681 aa23.07■■□□□ 1.28
CPSF2-202ENST00000553427 GNAI2P04899 355 aa23.07■■□□□ 1.28
CPSF2-202ENST00000553427 SCNN1DP51172 638 aa23.07■■□□□ 1.28
CPSF2-202ENST00000553427 DOK7Q18PE1 504 aa23.07■■□□□ 1.28
CPSF2-202ENST00000553427 PODNQ7Z5L7 613 aa23.07■■□□□ 1.28
CPSF2-202ENST00000553427 TAF1DQ9H5J8 278 aaPredicted RBP23.07■■□□□ 1.28
CPSF2-202ENST00000553427 KCNJ4P48050 445 aa23.06■■□□□ 1.28
CPSF2-202ENST00000553427 PTPN12Q05209 780 aaKnown RBP23.06■■□□□ 1.28
CPSF2-202ENST00000553427 PUS3Q9BZE2 481 aaKnown RBP23.06■■□□□ 1.28
CPSF2-202ENST00000553427 COA1Q9GZY4 146 aa23.06■■□□□ 1.28
CPSF2-202ENST00000553427 G3V3G9 751 aa23.05■■□□□ 1.28
CPSF2-202ENST00000553427 TAF5LO75529 589 aa23.05■■□□□ 1.28
CPSF2-202ENST00000553427 FSTL1Q12841 308 aa23.05■■□□□ 1.28
CPSF2-202ENST00000553427 DCAF8Q5TAQ9 597 aa23.05■■□□□ 1.28
CPSF2-202ENST00000553427 ITPRIPQ8IWB1 547 aa23.05■■□□□ 1.28
CPSF2-202ENST00000553427 SCN9AQ15858 1988 aa23.04■■□□□ 1.28
CPSF2-202ENST00000553427 LMOD1P29536 600 aaPredicted RBP23.04■■□□□ 1.28
CPSF2-202ENST00000553427 EPHX2P34913 555 aa23.04■■□□□ 1.28
CPSF2-202ENST00000553427 UBE4AQ14139 1066 aa23.04■■□□□ 1.28
CPSF2-202ENST00000553427 HELBQ8NG08 1087 aaPredicted RBP23.04■■□□□ 1.28
CPSF2-202ENST00000553427 GPRC5DQ9NZD1 345 aa23.04■■□□□ 1.28
CPSF2-202ENST00000553427 PSME4Q14997 1843 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 EYA2O00167 538 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 PSMD14O00487 310 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 CIAO1O76071 339 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 RPS12P25398 132 aaKnown RBP23.03■■□□□ 1.28
CPSF2-202ENST00000553427 KLRK1P26718 216 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 GMPSP49915 693 aaPredicted RBP23.03■■□□□ 1.28
CPSF2-202ENST00000553427 LRRC24Q50LG9 513 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms