RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 CNTNAP1P78357 1384 aa24.91■■□□□ 1.58
IFT43-204ENST00000553338 TTLL11Q8NHH1 800 aa24.9■■□□□ 1.58
IFT43-204ENST00000553338 MYH3P11055 1940 aa24.9■■□□□ 1.58
IFT43-204ENST00000553338 CACNA1FO60840 1977 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 G3V3G9 751 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 H7C1W4 665 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 PSMD14O00487 310 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 GCKRQ14397 625 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 DCAF8Q5TAQ9 597 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 GREM2Q9H772 168 aa24.89■■□□□ 1.58
IFT43-204ENST00000553338 ZBTB12Q9Y330 459 aaPredicted RBP24.89■■□□□ 1.58
IFT43-204ENST00000553338 HSPA1AP0DMV8 641 aaKnown RBP24.88■■□□□ 1.57
IFT43-204ENST00000553338 HSPA1BP0DMV9 641 aaKnown RBP24.88■■□□□ 1.57
IFT43-204ENST00000553338 LINS1Q8NG48 757 aa24.88■■□□□ 1.57
IFT43-204ENST00000553338 CNOT7Q9UIV1 285 aaKnown RBP24.88■■□□□ 1.57
IFT43-204ENST00000553338 XDHP47989 1333 aa24.87■■□□□ 1.57
IFT43-204ENST00000553338 MICALL2Q8IY33 904 aa24.87■■□□□ 1.57
IFT43-204ENST00000553338 ABT1Q9ULW3 272 aaKnown RBP24.87■■□□□ 1.57
IFT43-204ENST00000553338 SPEF2Q9C093 1822 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 RTL9Q8NET4 1388 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 SHTN1A0MZ66 631 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 H7C1D1 291 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 FMR1Q06787 632 aaKnown RBP eCLIP24.86■■□□□ 1.57
IFT43-204ENST00000553338 IFFO2Q5TF58 517 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 TRPM4Q8TD43 1214 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 KCNQ5Q9NR82 932 aa24.86■■□□□ 1.57
IFT43-204ENST00000553338 TRAF5O00463 557 aa24.85■■□□□ 1.57
IFT43-204ENST00000553338 F6X3S4 739 aa24.84■■□□□ 1.57
IFT43-204ENST00000553338 ATP2B4P23634 1241 aa24.84■■□□□ 1.57
IFT43-204ENST00000553338 DPF2Q92785 391 aa24.84■■□□□ 1.57
IFT43-204ENST00000553338 PLA2G12BQ9BX93 195 aa24.84■■□□□ 1.57
IFT43-204ENST00000553338 BSDC1Q9NW68 430 aaPredicted RBP24.84■■□□□ 1.57
IFT43-204ENST00000553338 VEGFBP49765 207 aa24.83■■□□□ 1.57
IFT43-204ENST00000553338 HIRAP54198 1017 aaPredicted RBP24.83■■□□□ 1.57
IFT43-204ENST00000553338 CASP7P55210 303 aa24.83■■□□□ 1.57
IFT43-204ENST00000553338 ZNF521Q96K83 1311 aa24.83■■□□□ 1.56
IFT43-204ENST00000553338 RPS12P25398 132 aaKnown RBP24.82■■□□□ 1.56
IFT43-204ENST00000553338 IGHMBP2P38935 993 aaKnown RBP24.82■■□□□ 1.56
IFT43-204ENST00000553338 DEFB115Q30KQ5 88 aa24.82■■□□□ 1.56
IFT43-204ENST00000553338 ZC3H15Q8WU90 426 aaKnown RBP24.82■■□□□ 1.56
IFT43-204ENST00000553338 MINPP1Q9UNW1 487 aa24.82■■□□□ 1.56
IFT43-204ENST00000553338 RASSF10A6NK89 507 aa24.81■■□□□ 1.56
IFT43-204ENST00000553338 ITGA6P23229 1130 aa24.81■■□□□ 1.56
IFT43-204ENST00000553338 FAM161AQ3B820 660 aa24.81■■□□□ 1.56
IFT43-204ENST00000553338 GLIS2Q9BZE0 524 aaPredicted RBP24.81■■□□□ 1.56
IFT43-204ENST00000553338 TBC1D10BQ4KMP7 808 aaPredicted RBP24.8■■□□□ 1.56
IFT43-204ENST00000553338 BEND3Q5T5X7 828 aa24.8■■□□□ 1.56
IFT43-204ENST00000553338 SAMD7Q7Z3H4 446 aa24.8■■□□□ 1.56
IFT43-204ENST00000553338 PGAP2Q9UHJ9 254 aa24.8■■□□□ 1.56
IFT43-204ENST00000553338 TRPM7Q96QT4 1865 aa24.79■■□□□ 1.56
IFT43-204ENST00000553338 VIL1P09327 827 aaKnown RBP24.79■■□□□ 1.56
IFT43-204ENST00000553338 SCN9AQ15858 1988 aa24.79■■□□□ 1.56
IFT43-204ENST00000553338 CSF1RP07333 972 aa24.78■■□□□ 1.56
IFT43-204ENST00000553338 CCT4P50991 539 aaKnown RBP24.78■■□□□ 1.56
IFT43-204ENST00000553338 RBM26Q5T8P6 1007 aaKnown RBP24.78■■□□□ 1.56
IFT43-204ENST00000553338 COL13A1Q5TAT6 717 aaPredicted RBP24.78■■□□□ 1.56
IFT43-204ENST00000553338 CST9Q5W186 159 aa24.78■■□□□ 1.56
IFT43-204ENST00000553338 MPHOSPH8Q99549 860 aa24.78■■□□□ 1.56
IFT43-204ENST00000553338 WTIPA6NIX2 430 aaPredicted RBP24.77■■□□□ 1.56
IFT43-204ENST00000553338 CELF2O95319 508 aaKnown RBP24.77■■□□□ 1.56
IFT43-204ENST00000553338 PAXIP1Q6ZW49 1069 aaPredicted RBP24.77■■□□□ 1.56
IFT43-204ENST00000553338 CDC37L1Q7L3B6 337 aa24.77■■□□□ 1.56
IFT43-204ENST00000553338 MED23Q9ULK4 1368 aa24.77■■□□□ 1.56
IFT43-204ENST00000553338 ANKRD18BA2A2Z9 1011 aa24.76■■□□□ 1.55
IFT43-204ENST00000553338 EGFRP00533 1210 aa24.76■■□□□ 1.55
IFT43-204ENST00000553338 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
IFT43-204ENST00000553338 ZNF408Q9H9D4 720 aa24.76■■□□□ 1.55
IFT43-204ENST00000553338 CHMP3Q9Y3E7 222 aa24.76■■□□□ 1.55
IFT43-204ENST00000553338 E9PSI1 815 aa24.75■■□□□ 1.55
IFT43-204ENST00000553338 RSBN1LQ6PCB5 846 aaPredicted RBP24.75■■□□□ 1.55
IFT43-204ENST00000553338 PODNQ7Z5L7 613 aa24.75■■□□□ 1.55
IFT43-204ENST00000553338 ANKRD2Q9GZV1 360 aa24.75■■□□□ 1.55
IFT43-204ENST00000553338 WDR33Q9C0J8 1336 aaKnown RBP24.75■■□□□ 1.55
IFT43-204ENST00000553338 FOXO4P98177 505 aa24.74■■□□□ 1.55
IFT43-204ENST00000553338 KIF4BQ2VIQ3 1234 aa24.74■■□□□ 1.55
IFT43-204ENST00000553338 USP48Q86UV5 1035 aa24.74■■□□□ 1.55
IFT43-204ENST00000553338 LEMD3Q9Y2U8 911 aa24.74■■□□□ 1.55
IFT43-204ENST00000553338 TLL2Q9Y6L7 1015 aa24.74■■□□□ 1.55
IFT43-204ENST00000553338 PCNTO95613 3336 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 PSME4Q14997 1843 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 USP17L3A6NCW0 530 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 USP17L4A6NCW7 530 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 GRM8O00222 908 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 GRM1Q13255 1194 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 IFIT5Q13325 482 aaKnown RBP24.73■■□□□ 1.55
IFT43-204ENST00000553338 USP17L1Q7RTZ2 530 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 AGBL3Q8NEM8 1001 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 AIDAQ96BJ3 306 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 SRCIN1Q9C0H9 1055 aa24.73■■□□□ 1.55
IFT43-204ENST00000553338 C9orf78Q9NZ63 289 aaPredicted RBP24.73■■□□□ 1.55
IFT43-204ENST00000553338 ZNF804BA4D1E1 1349 aa24.72■■□□□ 1.55
IFT43-204ENST00000553338 ZNF609O15014 1411 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 FOXN1O15353 648 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 ALDH1L1O75891 902 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 ECE1P42892 770 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 KCNJ4P48050 445 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 CYP4F22Q6NT55 531 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 KRT26Q7Z3Y9 468 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 FBXW7Q969H0 707 aa24.71■■□□□ 1.55
IFT43-204ENST00000553338 DCPSQ96C86 337 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms