RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CASP7P55210 303 aa16.48■□□□□ 0.23
ACTN1-207ENST00000553290 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
ACTN1-207ENST00000553290 BCL2L13Q9BXK5 485 aa16.48■□□□□ 0.23
ACTN1-207ENST00000553290 GREM2Q9H772 168 aa16.48■□□□□ 0.23
ACTN1-207ENST00000553290 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
ACTN1-207ENST00000553290 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
ACTN1-207ENST00000553290 BSDC1Q9NW68 430 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-207ENST00000553290 XDHP47989 1333 aa16.47■□□□□ 0.23
ACTN1-207ENST00000553290 UFL1O94874 794 aa16.47■□□□□ 0.23
ACTN1-207ENST00000553290 BEND3Q5T5X7 828 aa16.47■□□□□ 0.23
ACTN1-207ENST00000553290 MAP1SQ66K74 1059 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-207ENST00000553290 JMYQ8N9B5 988 aa16.47■□□□□ 0.23
ACTN1-207ENST00000553290 ECE2O60344 883 aa16.46■□□□□ 0.23
ACTN1-207ENST00000553290 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
ACTN1-207ENST00000553290 G3V3G9 751 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 PSMD14O00487 310 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 CSF1RP07333 972 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
ACTN1-207ENST00000553290 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 DPF2Q92785 391 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-207ENST00000553290 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
ACTN1-207ENST00000553290 TMEM88BA6NKF7 163 aa16.44■□□□□ 0.22
ACTN1-207ENST00000553290 ALDH1L1O75891 902 aa16.44■□□□□ 0.22
ACTN1-207ENST00000553290 ITGA6P23229 1130 aa16.44■□□□□ 0.22
ACTN1-207ENST00000553290 RPS12P25398 132 aaKnown RBP16.44■□□□□ 0.22
ACTN1-207ENST00000553290 CNOT7Q9UIV1 285 aaKnown RBP16.44■□□□□ 0.22
ACTN1-207ENST00000553290 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
ACTN1-207ENST00000553290 H7C1D1 291 aa16.43■□□□□ 0.22
ACTN1-207ENST00000553290 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
ACTN1-207ENST00000553290 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
ACTN1-207ENST00000553290 GRM8O00222 908 aa16.42■□□□□ 0.22
ACTN1-207ENST00000553290 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
ACTN1-207ENST00000553290 MRPL50Q8N5N7 158 aaKnown RBP16.42■□□□□ 0.22
ACTN1-207ENST00000553290 ZC3H15Q8WU90 426 aaKnown RBP16.42■□□□□ 0.22
ACTN1-207ENST00000553290 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
ACTN1-207ENST00000553290 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-207ENST00000553290 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-207ENST00000553290 PTPRCP08575 1304 aa16.42■□□□□ 0.22
ACTN1-207ENST00000553290 ANKRD18BA2A2Z9 1011 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 VIL1P09327 827 aaKnown RBP16.41■□□□□ 0.22
ACTN1-207ENST00000553290 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
ACTN1-207ENST00000553290 FOXO4P98177 505 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 PODNQ7Z5L7 613 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 ANKRD2Q9GZV1 360 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 LEMD3Q9Y2U8 911 aa16.41■□□□□ 0.22
ACTN1-207ENST00000553290 SCN9AQ15858 1988 aa16.4■□□□□ 0.22
ACTN1-207ENST00000553290 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
ACTN1-207ENST00000553290 PCNTO95613 3336 aa16.4■□□□□ 0.22
ACTN1-207ENST00000553290 IFIT5Q13325 482 aaKnown RBP16.4■□□□□ 0.22
ACTN1-207ENST00000553290 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
ACTN1-207ENST00000553290 CDCA7LQ96GN5 454 aa16.4■□□□□ 0.22
ACTN1-207ENST00000553290 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
ACTN1-207ENST00000553290 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
ACTN1-207ENST00000553290 CT47B1P0C2W7 299 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-207ENST00000553290 HIRAP54198 1017 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-207ENST00000553290 ALDH1L2Q3SY69 923 aa16.39■□□□□ 0.21
ACTN1-207ENST00000553290 TRPM4Q8TD43 1214 aa16.39■□□□□ 0.21
ACTN1-207ENST00000553290 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
ACTN1-207ENST00000553290 CHMP3Q9Y3E7 222 aa16.39■□□□□ 0.21
ACTN1-207ENST00000553290 PSME4Q14997 1843 aa16.38■□□□□ 0.21
ACTN1-207ENST00000553290 TRPM7Q96QT4 1865 aa16.38■□□□□ 0.21
ACTN1-207ENST00000553290 SHTN1A0MZ66 631 aa16.38■□□□□ 0.21
ACTN1-207ENST00000553290 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
ACTN1-207ENST00000553290 AGBL3Q8NEM8 1001 aa16.38■□□□□ 0.21
ACTN1-207ENST00000553290 ZNF609O15014 1411 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 WTIPA6NIX2 430 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-207ENST00000553290 CHRNDQ07001 517 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 CCDC57Q2TAC2 916 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-207ENST00000553290 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
ACTN1-207ENST00000553290 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
ACTN1-207ENST00000553290 KCNJ4P48050 445 aa16.36■□□□□ 0.21
ACTN1-207ENST00000553290 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
ACTN1-207ENST00000553290 CDC37L1Q7L3B6 337 aa16.36■□□□□ 0.21
ACTN1-207ENST00000553290 UTYO14607 1347 aa16.36■□□□□ 0.21
ACTN1-207ENST00000553290 TRAF5O00463 557 aa16.35■□□□□ 0.21
ACTN1-207ENST00000553290 FMR1Q06787 632 aaKnown RBP eCLIP16.35■□□□□ 0.21
ACTN1-207ENST00000553290 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-207ENST00000553290 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
ACTN1-207ENST00000553290 GLIS2Q9BZE0 524 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-207ENST00000553290 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
ACTN1-207ENST00000553290 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
ACTN1-207ENST00000553290 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-207ENST00000553290 VEGFBP49765 207 aa16.34■□□□□ 0.21
ACTN1-207ENST00000553290 ZNF280AP59817 542 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-207ENST00000553290 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
ACTN1-207ENST00000553290 RBM26Q5T8P6 1007 aaKnown RBP16.34■□□□□ 0.21
ACTN1-207ENST00000553290 CST9Q5W186 159 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms