RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
ITGA5-213ENST00000553071 DPP8Q6V1X1 898 aaPredicted RBP21.32■■□□□ 1
ITGA5-213ENST00000553071 ERC1Q8IUD2 1116 aa21.32■■□□□ 1
ITGA5-213ENST00000553071 RWDD1Q9H446 243 aaPredicted RBP21.32■■□□□ 1
ITGA5-213ENST00000553071 PODXL2Q9NZ53 605 aa21.32■■□□□ 1
ITGA5-213ENST00000553071 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
ITGA5-213ENST00000553071 NSFL1CQ9UNZ2 370 aaKnown RBP21.32■■□□□ 1
ITGA5-213ENST00000553071 RIPOR2Q9Y4F9 1068 aa21.32■■□□□ 1
ITGA5-213ENST00000553071 COL11A2P13942 1736 aaPredicted RBP21.32■■□□□ 1
ITGA5-213ENST00000553071 XDHP47989 1333 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 ATP2B4P23634 1241 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 OS9Q13438 667 aaPredicted RBP21.31■■□□□ 1
ITGA5-213ENST00000553071 VPS33BQ9H267 617 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 CEP126Q9P2H0 1117 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 WWC3Q9ULE0 1092 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 LEMD3Q9Y2U8 911 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
ITGA5-213ENST00000553071 SRCAPQ6ZRS2 3230 aa21.3■■□□□ 1
ITGA5-213ENST00000553071 CHRNDQ07001 517 aa21.3■■□□□ 1
ITGA5-213ENST00000553071 HDAC1Q13547 482 aaPredicted RBP21.3■■□□□ 1
ITGA5-213ENST00000553071 METTL24Q5JXM2 366 aa21.3■■□□□ 1
ITGA5-213ENST00000553071 SIRT2Q8IXJ6 389 aa21.3■■□□□ 1
ITGA5-213ENST00000553071 KLHDC4Q8TBB5 520 aa21.3■■□□□ 1
ITGA5-213ENST00000553071 PSMD1Q99460 953 aa21.3■■□□□ 1
ITGA5-213ENST00000553071 RAB11FIP3O75154 756 aa21.29■■□□□ 1
ITGA5-213ENST00000553071 ARHGAP27Q6ZUM4 889 aa21.29■■□□□ 1
ITGA5-213ENST00000553071 EYA3Q99504 573 aa21.29■■□□□ 1
ITGA5-213ENST00000553071 SIL1Q9H173 461 aa21.29■■□□□ 1
ITGA5-213ENST00000553071 GGA1Q9UJY5 639 aa21.29■■□□□ 1
ITGA5-213ENST00000553071 PA2G4Q9UQ80 394 aaKnown RBP21.29■■□□□ 1
ITGA5-213ENST00000553071 SLX4Q8IY92 1834 aa21.28■■□□□ 1
ITGA5-213ENST00000553071 KCNJ4P48050 445 aa21.28■■□□□ 1
ITGA5-213ENST00000553071 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
ITGA5-213ENST00000553071 LRRC24Q50LG9 513 aa21.28■■□□□ 1
ITGA5-213ENST00000553071 RTFDC1Q9BY42 306 aaPredicted RBP21.28■■□□□ 1
ITGA5-213ENST00000553071 PUS3Q9BZE2 481 aaKnown RBP21.28■■□□□ 1
ITGA5-213ENST00000553071 TAOK3Q9H2K8 898 aa21.28■■□□□ 1
ITGA5-213ENST00000553071 AKAP2Q9Y2D5 859 aa21.28■■□□□ 1
ITGA5-213ENST00000553071 LTBP3Q9NS15 1303 aa21.28■■□□□ 1
ITGA5-213ENST00000553071 PDE8BO95263 885 aa21.27■■□□□ 1
ITGA5-213ENST00000553071 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
ITGA5-213ENST00000553071 GPSM2P81274 684 aa21.27■■□□□ 1
ITGA5-213ENST00000553071 UBE4AQ14139 1066 aa21.27■■□□□ 1
ITGA5-213ENST00000553071 ATG9AQ7Z3C6 839 aa21.27■■□□□ 1
ITGA5-213ENST00000553071 DCTPP1Q9H773 170 aa21.27■■□□□ 1
ITGA5-213ENST00000553071 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
ITGA5-213ENST00000553071 C6orf229H3BNL8 230 aa21.26■□□□□ 0.99
ITGA5-213ENST00000553071 GCC1Q96CN9 775 aa21.26■□□□□ 0.99
ITGA5-213ENST00000553071 TBC1D16Q8TBP0 767 aa21.25■□□□□ 0.99
ITGA5-213ENST00000553071 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
ITGA5-213ENST00000553071 UFL1O94874 794 aa21.24■□□□□ 0.99
ITGA5-213ENST00000553071 PUM3Q15397 648 aaKnown RBP21.24■□□□□ 0.99
ITGA5-213ENST00000553071 KIF1BPQ96EK5 621 aa21.24■□□□□ 0.99
ITGA5-213ENST00000553071 GPR108Q9NPR9 543 aa21.24■□□□□ 0.99
ITGA5-213ENST00000553071 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
ITGA5-213ENST00000553071 ZNF804BA4D1E1 1349 aa21.24■□□□□ 0.99
ITGA5-213ENST00000553071 IFIT1P09914 478 aaKnown RBP21.23■□□□□ 0.99
ITGA5-213ENST00000553071 WASHC4Q2M389 1173 aa21.23■□□□□ 0.99
ITGA5-213ENST00000553071 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
ITGA5-213ENST00000553071 HELBQ8NG08 1087 aaPredicted RBP21.23■□□□□ 0.99
ITGA5-213ENST00000553071 LPIN2Q92539 896 aa21.23■□□□□ 0.99
ITGA5-213ENST00000553071 EXOC6BQ9Y2D4 811 aa21.23■□□□□ 0.99
ITGA5-213ENST00000553071 ARFGEF1Q9Y6D6 1849 aa21.22■□□□□ 0.99
ITGA5-213ENST00000553071 TAF5LO75529 589 aa21.22■□□□□ 0.99
ITGA5-213ENST00000553071 C15orf52Q6ZUT6 534 aaKnown RBP21.22■□□□□ 0.99
ITGA5-213ENST00000553071 VGLL2Q8N8G2 317 aa21.22■□□□□ 0.99
ITGA5-213ENST00000553071 POLLQ9UGP5 575 aa21.22■□□□□ 0.99
ITGA5-213ENST00000553071 NFKBIEO00221 500 aa21.21■□□□□ 0.99
ITGA5-213ENST00000553071 SLC5A1P13866 664 aa21.21■□□□□ 0.99
ITGA5-213ENST00000553071 LMNB1P20700 586 aa21.21■□□□□ 0.99
ITGA5-213ENST00000553071 TFCP2Q12800 502 aa21.21■□□□□ 0.99
ITGA5-213ENST00000553071 TAF1P21675 1872 aa21.21■□□□□ 0.99
ITGA5-213ENST00000553071 G3V3G9 751 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 SASH1O94885 1247 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 CAVIN4Q5BKX8 364 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 DCAF8Q5TAQ9 597 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 CLASRPQ8N2M8 674 aaKnown RBP21.2■□□□□ 0.98
ITGA5-213ENST00000553071 RHPN1Q8TCX5 695 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 LRRCC1Q9C099 1032 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 SNED1Q8TER0 1413 aa21.2■□□□□ 0.98
ITGA5-213ENST00000553071 LRRC37AA6NMS7 1700 aa21.19■□□□□ 0.98
ITGA5-213ENST00000553071 IARSP41252 1262 aaKnown RBP21.19■□□□□ 0.98
ITGA5-213ENST00000553071 PPIP5K2O43314 1243 aa21.18■□□□□ 0.98
ITGA5-213ENST00000553071 FGFR2P21802 821 aa21.18■□□□□ 0.98
ITGA5-213ENST00000553071 LARGE2Q8N3Y3 721 aa21.18■□□□□ 0.98
ITGA5-213ENST00000553071 ZNF277Q9NRM2 450 aaPredicted RBP21.18■□□□□ 0.98
ITGA5-213ENST00000553071 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
ITGA5-213ENST00000553071 ZNF804AQ7Z570 1209 aa21.17■□□□□ 0.98
ITGA5-213ENST00000553071 VPS37DQ86XT2 251 aa21.17■□□□□ 0.98
ITGA5-213ENST00000553071 COA1Q9GZY4 146 aa21.17■□□□□ 0.98
ITGA5-213ENST00000553071 CACNA1SQ13698 1873 aa21.16■□□□□ 0.98
ITGA5-213ENST00000553071 COL4A1P02462 1669 aa21.16■□□□□ 0.98
ITGA5-213ENST00000553071 TNNI3KQ59H18 835 aa21.16■□□□□ 0.98
ITGA5-213ENST00000553071 SMC5Q8IY18 1101 aa21.16■□□□□ 0.98
ITGA5-213ENST00000553071 NIM1KQ8IY84 436 aa21.16■□□□□ 0.98
ITGA5-213ENST00000553071 CCDC136Q96JN2 1154 aa21.16■□□□□ 0.98
ITGA5-213ENST00000553071 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms